Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_B24
(878 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 38 2e-04
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 38 2e-04
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 37 2e-04
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 36 5e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 36 7e-04
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 7e-04
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 35 9e-04
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 33 0.003
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 33 0.003
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 33 0.005
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 32 0.006
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 31 0.014
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 31 0.019
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 31 0.019
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 31 0.019
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.024
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.043
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.043
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 29 0.043
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 28 0.099
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 28 0.13
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 28 0.13
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 28 0.13
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 1.2
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 8.6
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 37.5 bits (83), Expect = 2e-04
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQXDNWP 509
V S+ +WRPD+VL N A G+Y + +A V +G V W + S+ + +P
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 510 NDMXTCTFK 536
D+ TC K
Sbjct: 162 YDVQTCVLK 170
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 321 TPPAFQXSRLSIQFI*RSACIRTVDSDSRML 229
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 37.5 bits (83), Expect = 2e-04
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQXDNWPNDM 518
V S+ +WRPD+VL NA A +A + + G V W + + + +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 519 XTCTFK 536
TC K
Sbjct: 165 QTCVLK 170
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 321 TPPAFQXSRLSIQFI*RSACIRTVDSDSRML 229
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 37.1 bits (82), Expect = 2e-04
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQXDNWPNDM 518
V S+ +WRPD+VL NA A +A ++ G V W + + + +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 519 XTCTFK 536
TC K
Sbjct: 161 QTCVMK 166
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 35.9 bits (79), Expect = 5e-04
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQXDNWPNDM 518
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ +P D
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 519 XTCTFK 536
TC K
Sbjct: 163 QTCIMK 168
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLXWN 310
K+ VN L ++ N+ E ++ L+ W D +L W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWD 91
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 35.5 bits (78), Expect = 7e-04
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQXDNWPNDMX 521
ER+WRPD N + + R+S +G + + RL I M+ N+P D
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 522 TC 527
+C
Sbjct: 175 SC 176
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 35.5 bits (78), Expect = 7e-04
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +2
Query: 113 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 277
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 278 MNWIDKRLXWNA 313
+ W L W +
Sbjct: 88 LMWEQSHLTWKS 99
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 35.1 bits (77), Expect = 9e-04
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +3
Query: 318 EWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISM 491
E+G T L V SE +W PD+VL N A G + +A + G V W + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 492 QXDNWPNDMXTCTFK 536
+P D TC K
Sbjct: 148 DVRYFPFDQQTCFMK 162
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 33.5 bits (73), Expect = 0.003
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQXDNWP 509
V SE +W PD+VL N A G+Y + +A + G VSW + + + +P
Sbjct: 110 VPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEINVEYFP 166
Query: 510 NDMXTCTFK 536
D +C K
Sbjct: 167 FDEQSCIMK 175
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.003
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQXDNWPND 515
V R+WRPD +L N A + VS+ G V W+ + + + +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 516 MXTCTFK 536
C K
Sbjct: 142 EQRCVLK 148
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 32.7 bits (71), Expect = 0.005
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +3
Query: 324 GCXTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 491
G T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 492 QXDNWPNDMXTCTFK 536
+ +P D TC K
Sbjct: 148 DVEYFPFDEQTCFMK 162
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 32.3 bits (70), Expect = 0.006
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQXDNWPNDM 518
+ RLW+PDV++ N+A G Y V NNG+ ++ + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 519 XTCTFK 536
C K
Sbjct: 160 QRCEMK 165
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 31.1 bits (67), Expect = 0.014
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 286
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 287 IDKRL 301
+D+RL
Sbjct: 62 VDRRL 66
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 30.7 bits (66), Expect = 0.019
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +3
Query: 348 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQXDNWPNDM 518
+E++W PD N + D R R+S +GSV++ R + M +P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 519 XTCT 530
CT
Sbjct: 173 QNCT 176
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 30.7 bits (66), Expect = 0.019
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQXDNWPNDM 518
++ +LW+PD+++ N+A G Y V++NGS ++ + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 519 XTCTFK 536
C K
Sbjct: 191 QHCDMK 196
Score = 24.2 bits (50), Expect = 1.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLXWN 310
++ E + A L++ W+D L WN
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWN 119
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 30.7 bits (66), Expect = 0.019
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQXDNWPNDM 518
++ +LW+PD+++ N+A G Y V++NGS ++ + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 519 XTCTFK 536
C K
Sbjct: 191 QHCDMK 196
Score = 24.2 bits (50), Expect = 1.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLXWN 310
++ E + A L++ W+D L WN
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWN 119
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 30.3 bits (65), Expect = 0.024
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQXDNWPNDM 518
++ +LW+PD+++ N+A G Y V++NGS ++ + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 519 XTCTFK 536
C K
Sbjct: 123 QHCDMK 128
Score = 24.2 bits (50), Expect = 1.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLXWN 310
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 29.5 bits (63), Expect = 0.043
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQXDNWPNDM 518
++ +LW+PD+++ N+A G Y V+++GS ++ + M +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 519 XTCTFK 536
C K
Sbjct: 123 QHCDMK 128
Score = 24.2 bits (50), Expect = 1.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLXWN 310
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 29.5 bits (63), Expect = 0.043
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQXDNWPNDM 518
++ +LW+PD+++ N+A G Y V+++GS ++ + M +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 519 XTCTFK 536
C K
Sbjct: 123 QHCDMK 128
Score = 24.2 bits (50), Expect = 1.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLXWN 310
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 29.5 bits (63), Expect = 0.043
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQXDNWPN 512
V S+ +W PD+ + N+ T G V ++GSVS + + + +WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 513 DMXTC 527
D C
Sbjct: 179 DTHRC 183
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 28.3 bits (60), Expect = 0.099
Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQXDNWPNDM 518
++ +LW+PD+++ N+A G Y V+++GS ++ + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 519 XTCTFK 536
C K
Sbjct: 123 QHCDMK 128
Score = 24.2 bits (50), Expect = 1.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLXWN 310
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 27.9 bits (59), Expect = 0.13
Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQXDNWPNDM 518
++ +LW+PD+++ N+A G Y V+++GS ++ + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 519 XTCTFK 536
C K
Sbjct: 123 QHCDMK 128
Score = 24.2 bits (50), Expect = 1.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLXWN 310
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 27.9 bits (59), Expect = 0.13
Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQXDNWPNDM 518
++ +LW+PD+++ N+A G Y V+++GS ++ + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 519 XTCTFK 536
C K
Sbjct: 123 QHCDMK 128
Score = 24.2 bits (50), Expect = 1.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLXWN 310
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 27.9 bits (59), Expect = 0.13
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 298
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 299 LXWN 310
L +N
Sbjct: 95 LRFN 98
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 24.6 bits (51), Expect = 1.2
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQXDNWPND 515
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 516 MXTC 527
+ C
Sbjct: 127 IQIC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.8 bits (44), Expect = 8.6
Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQXDNWPNDMX 521
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 522 TC 527
C
Sbjct: 176 EC 177
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,620
Number of Sequences: 438
Number of extensions: 3825
Number of successful extensions: 52
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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