Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_B22
(839 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z96100-6|CAB76719.1| 222|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z81589-5|CAB04722.1| 233|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z81589-4|CAB04721.1| 256|Caenorhabditis elegans Hypothetical pr... 31 1.3
AL033124-1|CAB76736.1| 222|Caenorhabditis elegans Hypothetical ... 31 1.3
Z81487-6|CAB03996.2| 872|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 30 2.4
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 30 2.4
U40800-4|AAO91742.1| 763|Caenorhabditis elegans Hypothetical pr... 30 2.4
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 30 2.4
U61954-2|ABS19469.1| 957|Caenorhabditis elegans Hypothetical pr... 29 4.1
U61954-1|AAK29810.1| 955|Caenorhabditis elegans Hypothetical pr... 29 4.1
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 29 4.1
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 29 4.1
AF098992-6|AAC67456.2| 182|Caenorhabditis elegans Hypothetical ... 29 5.4
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z81513-11|CAB04184.2| 254|Caenorhabditis elegans Hypothetical p... 28 9.5
Z70757-1|CAA94805.1| 497|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z68298-7|CAA92604.1| 447|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 28 9.5
U50067-5|AAY86219.1| 306|Caenorhabditis elegans Hypothetical pr... 28 9.5
U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protei... 28 9.5
U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protei... 28 9.5
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 28 9.5
>Z96100-6|CAB76719.1| 222|Caenorhabditis elegans Hypothetical
protein VH15N14R.1 protein.
Length = 222
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 9/50 (18%)
Frame = -1
Query: 311 LRLQDPRRRPSQYTRRLERDGA--ITTD-------DPDRDGALWVGVFAS 189
+++ D RRR + RR++RDG+ I D + DRDG+ W+G+ S
Sbjct: 143 IKMADGRRRRRRRRRRMDRDGSGWIEVDRGGSGWIEVDRDGSGWIGMDGS 192
>Z81589-5|CAB04722.1| 233|Caenorhabditis elegans Hypothetical
protein T08G5.9 protein.
Length = 233
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 199 TPTHSAPSRSGSSVVIAPSLSRRRV 273
+P HS PS SGSS +PS RR +
Sbjct: 203 SPIHSIPSSSGSSSTSSPSAKRRNI 227
>Z81589-4|CAB04721.1| 256|Caenorhabditis elegans Hypothetical
protein T08G5.8 protein.
Length = 256
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 199 TPTHSAPSRSGSSVVIAPSLSRRRV 273
+P HS PS SGSS +PS RR +
Sbjct: 226 SPIHSIPSSSGSSSTSSPSAKRRNI 250
>AL033124-1|CAB76736.1| 222|Caenorhabditis elegans Hypothetical
protein VH15N14R.1 protein.
Length = 222
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 9/50 (18%)
Frame = -1
Query: 311 LRLQDPRRRPSQYTRRLERDGA--ITTD-------DPDRDGALWVGVFAS 189
+++ D RRR + RR++RDG+ I D + DRDG+ W+G+ S
Sbjct: 143 IKMADGRRRRRRRRRRMDRDGSGWIEVDRGGSGWIEVDRDGSGWIGMDGS 192
>Z81487-6|CAB03996.2| 872|Caenorhabditis elegans Hypothetical
protein C54E10.1 protein.
Length = 872
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 199 TPTHSAPSRSGSSVVIAPSLSRRRV 273
+P HS PS SGSS +PS RR +
Sbjct: 842 SPIHSIPSSSGSSSTSSPSARRRNI 866
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -1
Query: 440 PSGP*LQHGPPRSGPPRSDYTGAGTCHAPDTKVSPSLIVSSESLRLQDPRRRPSQ 276
P P +H P P R+D AGTC A + +S + R DPR +P +
Sbjct: 1924 PPSPPPRH--PCQDPERNDCHPAGTCRATGAQSYTCECLSGYADRSPDPRNKPGR 1976
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -1
Query: 440 PSGP*LQHGPPRSGPPRSDYTGAGTCHAPDTKVSPSLIVSSESLRLQDPRRRPSQ 276
P P +H P P R+D AGTC A + +S + R DPR +P +
Sbjct: 2508 PPSPPPRH--PCQDPERNDCHPAGTCRATGAQSYTCECLSGYADRSPDPRNKPGR 2560
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -1
Query: 440 PSGP*LQHGPPRSGPPRSDYTGAGTCHAPDTKVSPSLIVSSESLRLQDPRRRPSQ 276
P P +H P P R+D AGTC A + +S + R DPR +P +
Sbjct: 1924 PPSPPPRH--PCQDPERNDCHPAGTCRATGAQSYTCECLSGYADRSPDPRNKPGR 1976
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -1
Query: 440 PSGP*LQHGPPRSGPPRSDYTGAGTCHAPDTKVSPSLIVSSESLRLQDPRRRPSQ 276
P P +H P P R+D AGTC A + +S + R DPR +P +
Sbjct: 2508 PPSPPPRH--PCQDPERNDCHPAGTCRATGAQSYTCECLSGYADRSPDPRNKPGR 2560
>U40800-4|AAO91742.1| 763|Caenorhabditis elegans Hypothetical
protein D2096.12 protein.
Length = 763
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = -1
Query: 539 EPESEASSVTIHPIHKNRANRLDGPTTSRRIGQPSGP*LQHGPPRSGPPR 390
+P+S+ S T P N L +S + + P +Q PP PP+
Sbjct: 42 DPDSDDSFETFAPTQTTTGNSLKSSASSTQSTEAKPPPVQFPPPSKNPPK 91
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -1
Query: 440 PSGP*LQHGPPRSGPPRSDYTGAGTCHAPDTKVSPSLIVSSESLRLQDPRRRPSQ 276
P P +H P P R+D AGTC A + +S + R DPR +P +
Sbjct: 2508 PPSPPPRH--PCQDPERNDCHPAGTCRATGAQSYTCECLSGYADRSPDPRNKPGR 2560
>U61954-2|ABS19469.1| 957|Caenorhabditis elegans Hypothetical protein
F41H10.6c protein.
Length = 957
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = +1
Query: 550 SLGMVASVSSCTGSEPSRRQSATIVGCDLDTAEHT--LVTCPAWEGVAPCPXRKNRKRLV 723
S+ M SS S S R S + D A L TCP + V P P K R
Sbjct: 817 SIDMADQSSSSGSSSSSTRPSHNLEIMDSGPAHAVVPLATCPHLKEVKPLPPAKINARTA 876
Query: 724 VAEC 735
+EC
Sbjct: 877 CSEC 880
>U61954-1|AAK29810.1| 955|Caenorhabditis elegans Hypothetical protein
F41H10.6b protein.
Length = 955
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = +1
Query: 550 SLGMVASVSSCTGSEPSRRQSATIVGCDLDTAEHT--LVTCPAWEGVAPCPXRKNRKRLV 723
S+ M SS S S R S + D A L TCP + V P P K R
Sbjct: 815 SIDMADQSSSSGSSSSSTRPSHNLEIMDSGPAHAVVPLATCPHLKEVKPLPPAKINARTA 874
Query: 724 VAEC 735
+EC
Sbjct: 875 CSEC 878
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -1
Query: 470 GPTTSRRIGQPSGP*--LQHGPPRSGPPRSDYTGAGTCHAPDTKVSPSLIVSSESLRLQD 297
GP +G P+ P + GPP + PP S Y+ P T+++P+L S S
Sbjct: 242 GPPIYPGLGPPALPLSPMPQGPPPNIPPSSIYSMPRANDLPPTEMAPTLPQISTSSNGAS 301
Query: 296 PRRRPS 279
P P+
Sbjct: 302 PSVSPA 307
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -1
Query: 470 GPTTSRRIGQPSGP*--LQHGPPRSGPPRSDYTGAGTCHAPDTKVSPSLIVSSESLRLQD 297
GP +G P+ P + GPP + PP S Y+ P T+++P+L S S
Sbjct: 242 GPPIYPGLGPPALPLSPMPQGPPPNIPPSSIYSMPRANDLPPTEMAPTLPQISTSSNGAS 301
Query: 296 PRRRPS 279
P P+
Sbjct: 302 PSVSPA 307
>AF098992-6|AAC67456.2| 182|Caenorhabditis elegans Hypothetical
protein F53C3.5 protein.
Length = 182
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 522 VLCHDSPNSQEPGESPRRSYDQPKDRPAVWTMTPA 418
++C + N + SP SY+ P+ P V +TP+
Sbjct: 126 LICTEKANERRGQGSPTTSYNHPRSVPEVQELTPS 160
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 646 LPCPSR-NQQWWHSAVGLAPIRCRNSPKQPCPVSTC 542
LPC + QQ +H A AP C ++ + CPV +C
Sbjct: 831 LPCDQQCTQQCYHQAPTCAPA-CASACEAQCPVVSC 865
>Z81513-11|CAB04184.2| 254|Caenorhabditis elegans Hypothetical
protein F26D2.14 protein.
Length = 254
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 511 VTEDASLSGSRRCSLGMVASVSSCTGSEPSRRQSATIVGCDL-DTAEHTLVT--CPA 672
V DA+L+ + C+L + S +C +E R ATIV D T++ CP+
Sbjct: 94 VIRDAALACPKTCALCCMTSAYNCRNAEFPRLNCATIVPAQCRDQRWRTIIAQDCPS 150
>Z70757-1|CAA94805.1| 497|Caenorhabditis elegans Hypothetical
protein ZK287.1 protein.
Length = 497
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 666 PRMGRGGAVSSSQK*EATCRCRVLWHXCSATTXXGRRCSTSAS 794
P G A Q + C CR ++ CSA+ G C+ AS
Sbjct: 111 PTSGCQCAKGKKQCVKKECACRTVYGFCSASCKCGGDCTNGAS 153
>Z68298-7|CAA92604.1| 447|Caenorhabditis elegans Hypothetical
protein F44D12.8 protein.
Length = 447
Score = 27.9 bits (59), Expect = 9.5
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = -1
Query: 518 SVTIHPIHKNRANRL--DGPTTSRRIGQPSGP*LQHGPPRSGPPRSDYTGAGTCHAPDTK 345
S T PI +N NR +G + +RR G S P PPR P S T T A
Sbjct: 3 STTNLPIRQNDDNRRRKEGKSQNRRGGPKSKPQPTIVPPRKTPSPSTVTPLPTVIALPAV 62
Query: 344 VSPSLIVSSESLRLQDP 294
+PS +++ L+DP
Sbjct: 63 STPS---PAQANLLKDP 76
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical protein
C02B4.1 protein.
Length = 1461
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/68 (25%), Positives = 27/68 (39%)
Frame = +1
Query: 538 SRRCSLGMVASVSSCTGSEPSRRQSATIVGCDLDTAEHTLVTCPAWEGVAPCPXRKNRKR 717
S C G+ + SC + ++ C EH+ +T W C +RKR
Sbjct: 916 SATCGEGLQSRERSCRRGSCTEDDASQTRRCVNGPCEHSYLTWSEWTTCETCSSFDSRKR 975
Query: 718 LVVAECCG 741
+A+C G
Sbjct: 976 --IAKCDG 981
>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical protein
C02B4.1 protein.
Length = 1461
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/68 (25%), Positives = 27/68 (39%)
Frame = +1
Query: 538 SRRCSLGMVASVSSCTGSEPSRRQSATIVGCDLDTAEHTLVTCPAWEGVAPCPXRKNRKR 717
S C G+ + SC + ++ C EH+ +T W C +RKR
Sbjct: 916 SATCGEGLQSRERSCRRGSCTEDDASQTRRCVNGPCEHSYLTWSEWTTCETCSSFDSRKR 975
Query: 718 LVVAECCG 741
+A+C G
Sbjct: 976 --IAKCDG 981
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 446 GQPSGP*LQHGPPRSGPPRSDYTGAGTCHAPDTKVSP 336
G+P GP GPP G P D GAG+ AP + P
Sbjct: 215 GEP-GPAGPPGPPGPGGPPGDAGGAGSDGAPGPQGPP 250
>U50067-5|AAY86219.1| 306|Caenorhabditis elegans Hypothetical
protein C18F3.4 protein.
Length = 306
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -1
Query: 656 SVCSAVSKSQPTMVALCRRLGSDPVQELTEATMPSEHLREPESEASSVTIHP 501
++ S+ K++PT L +DP +L AT+P+E L ++ S P
Sbjct: 104 AISSSTVKNEPTDSWTPSALSNDPTPDLLSATVPAELLTNLFAKTKSTEPKP 155
>U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protein
15, isoform a protein.
Length = 780
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 578 PAPDRSQADGRVPPLLVATWTRQSIRSSPAPHG 676
P P + A R PP+ VAT + S+P P G
Sbjct: 113 PDPQPTSAQARNPPVTVATTQASTTPSAPNPPG 145
>U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protein
15, isoform b protein.
Length = 777
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 578 PAPDRSQADGRVPPLLVATWTRQSIRSSPAPHG 676
P P + A R PP+ VAT + S+P P G
Sbjct: 110 PDPQPTSAQARNPPVTVATTQASTTPSAPNPPG 142
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/68 (25%), Positives = 27/68 (39%)
Frame = +1
Query: 538 SRRCSLGMVASVSSCTGSEPSRRQSATIVGCDLDTAEHTLVTCPAWEGVAPCPXRKNRKR 717
S C G+ + SC + ++ C EH+ +T W C +RKR
Sbjct: 916 SATCGEGLQSRERSCRRGSCTEDDASQTRRCVNGPCEHSYLTWSEWTTCETCSSFDSRKR 975
Query: 718 LVVAECCG 741
+A+C G
Sbjct: 976 --IAKCDG 981
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,034,528
Number of Sequences: 27780
Number of extensions: 500779
Number of successful extensions: 1533
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1529
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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