Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_B13
(839 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1377 + 36764461-36765339 34 0.16
04_03_0884 + 20543084-20543638 33 0.28
07_03_0676 + 20618677-20618840,20618938-20619502 33 0.37
04_04_0822 + 28352941-28353825,28353863-28354016,28354714-283547... 32 0.65
04_04_0858 + 28800691-28801155,28801293-28801515,28802555-28803048 31 1.1
09_03_0006 + 11426346-11426420,11426733-11427452 31 1.5
04_03_1017 + 21747044-21748051 31 1.5
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535... 30 2.0
10_07_0034 - 12163944-12164537 30 2.6
07_03_0675 + 20611460-20612053 29 3.5
07_03_0600 + 19866757-19867218,19867920-19868429 29 3.5
07_01_0568 - 4216898-4216911,4216997-4217024,4217265-4217335,421... 29 3.5
11_01_0315 - 2347254-2347345,2347485-2347895,2348182-2349633,234... 29 4.6
10_07_0053 - 12406958-12407011,12407012-12407168,12407280-124074... 29 4.6
07_03_1387 + 26202975-26203274,26203363-26203449,26203541-262036... 29 4.6
06_03_1501 + 30612643-30613310,30613396-30613501,30613732-306139... 29 4.6
04_04_0146 + 23106325-23108154 29 4.6
03_05_0750 - 27383848-27383940,27384016-27384137,27384525-273845... 29 4.6
01_01_0012 + 71903-72935,73468-73981,74619-76008 29 4.6
09_04_0667 - 19323771-19323858,19324022-19324076,19324582-19325185 29 6.1
09_04_0379 - 17094540-17094868,17095354-17095717 29 6.1
08_01_0585 + 5187545-5187961 29 6.1
07_03_1285 + 25477542-25477625,25477776-25477832,25477973-254780... 29 6.1
07_03_0565 - 19561078-19561425,19562253-19563746 29 6.1
03_02_0045 - 5251234-5251305,5251362-5251419,5252256-5252539,525... 29 6.1
09_02_0622 - 11310941-11311472,11312776-11312813,11312875-113129... 28 8.1
07_03_0860 + 22057309-22058453,22059833-22059964,22060328-220604... 28 8.1
07_01_0217 + 1620625-1621419,1621982-1622152,1622581-1622865,162... 28 8.1
05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149 28 8.1
01_05_0147 + 18597194-18597643,18598347-18598681,18600073-186001... 28 8.1
>01_06_1377 + 36764461-36765339
Length = 292
Score = 33.9 bits (74), Expect = 0.16
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = -1
Query: 422 PEGEASAVAAHPVRENRADRLDGSEAGR-RVRQAARPRLQHGP-PRVEPPRSNYTFAGAP 249
P+ ASA+ P+ R G G+ R+R A R R P P+ PP S+ + P
Sbjct: 121 PDSPASALITLPLL-----RPSGRPQGKLRIRLALRERSPPPPEPQYPPPSSSPYYFPPP 175
Query: 248 FPPRAKVXTPPVIGSER 198
PP PP GSE+
Sbjct: 176 PPPAYSAPPPPQYGSEQ 192
>04_03_0884 + 20543084-20543638
Length = 184
Score = 33.1 bits (72), Expect = 0.28
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -1
Query: 302 GPPRVEPPRSNYTFAGAPFPPRAKVXT---PPVIGSERLRLQVPGWRPGEQ 159
GP + PPRS + A AP PP+ K+ S+R + + GW PGE+
Sbjct: 10 GPMAMAPPRSGHATAAAPPPPQHKMAMMMHMTFFWSDRAVVLIRGW-PGER 59
>07_03_0676 + 20618677-20618840,20618938-20619502
Length = 242
Score = 32.7 bits (71), Expect = 0.37
Identities = 39/126 (30%), Positives = 50/126 (39%), Gaps = 10/126 (7%)
Frame = -1
Query: 446 MAGKHLR*PEGEASAVAAHPVRENR-ADRLDGSEAGRR---VRQAARPRLQHGPPRVEPP 279
M G+ E + A AA R NR A R++G A R A + P VE
Sbjct: 64 MGGRKDAGDEEDGEAGAATAFRRNRGAARVEGGVAEPREVVATSAGARETRQWRPEVEQW 123
Query: 278 RSNYTFAG---AP-FPPRAKVXTP--PVIGSERLRLQVPGWRPGEQARRLEGDGAVSSDR 117
R + FAG +P PR T V R + P P + RRLE GA +
Sbjct: 124 RQRHCFAGEDASPVLSPRNGGLTEGEEVAARPREKTARPDGAPARRERRLEAAGAEEREG 183
Query: 116 PDRDRA 99
R+RA
Sbjct: 184 RRRERA 189
>04_04_0822 +
28352941-28353825,28353863-28354016,28354714-28354754,
28355060-28355310,28355411-28355591,28356138-28356323,
28356396-28356569,28356992-28357150,28357424-28357501,
28357612-28357748,28357980-28358044,28358115-28358148,
28358216-28358372,28359135-28359196,28360041-28360118,
28360940-28361042
Length = 914
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 347 AGRRVRQAARPRLQHGPP-RVEPPRSNYTFAGAPFPPRAKV 228
AG+ R RP+ QH PP R PPR ++ + P A V
Sbjct: 83 AGKSTRVLNRPQRQHSPPGRALPPRESFRYNPKPAKAAAAV 123
>04_04_0858 + 28800691-28801155,28801293-28801515,28802555-28803048
Length = 393
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 58 GSFSVTSRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRS 204
G + R D SA + SGR + ++P+ S RR GRH G R+S
Sbjct: 103 GEGDEVNSRVDSCSAAAVSGRDDGSSPAMSPRRRSWEGRHAGGVAGRQS 151
>09_03_0006 + 11426346-11426420,11426733-11427452
Length = 264
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +1
Query: 31 KSXMVILTLGSFSVTSRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR--- 201
K +V+L S + R C +R S P+ RR C+ RH RRR
Sbjct: 30 KPAIVVLAAPPASSSQRHCAIRPVPPSSFSRRRRRRPPALRRCCAAWRHRTRKRRRTRLC 89
Query: 202 SLPITGGV 225
SL +TG V
Sbjct: 90 SLLVTGVV 97
>04_03_1017 + 21747044-21748051
Length = 335
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 97 SARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLP 210
S R+ + + T SP RRRA SP P T RR + P
Sbjct: 168 SRRAAASSPDYTPESPPRRRAASPDYSPSTPPRRAASP 205
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +1
Query: 97 SARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLP 210
S R S D +PS RRA SP P T RR + P
Sbjct: 196 STPPRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASP 233
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 109 RSGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLP 210
R S D +PS RRA SP P T RR + P
Sbjct: 186 RRAASPDYSPSTPPRRAASPDYSPSTPPRRAASP 219
>06_03_0310 -
19453047-19453160,19453240-19453338,19453441-19453513,
19453598-19453708,19453795-19453956,19454064-19454340,
19454542-19455160,19455256-19455471
Length = 556
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -1
Query: 329 QAARPRLQHGP--PRVEPPRSNYTFAGAPFPPRAKVXTPP 216
Q P L H P P + P A AP PPRA TPP
Sbjct: 161 QDPAPSLPHAPAPPPPQAPAPTPPQAPAPTPPRAPTPTPP 200
>10_07_0034 - 12163944-12164537
Length = 197
Score = 29.9 bits (64), Expect = 2.6
Identities = 38/126 (30%), Positives = 49/126 (38%), Gaps = 10/126 (7%)
Frame = -1
Query: 446 MAGKHLR*PEGEASAVAAHPVRENR-ADRLDGSEAGRR---VRQAARPRLQHGPPRVEPP 279
M G+ E + A AA R NR A ++G A R A + P VE
Sbjct: 1 MGGRKDAGDEEDGEAGAATAFRRNRGAAGVEGGVAEPREVVATSAGARETRQWRPEVEQW 60
Query: 278 RSNYTFAG---AP-FPPRAKVXTP--PVIGSERLRLQVPGWRPGEQARRLEGDGAVSSDR 117
R + FAG +P PR T V R + P P + RRLE GA +
Sbjct: 61 RQRHCFAGEDASPVLSPRNGGLTEGEEVAARPREKTARPDGAPARRERRLEAAGAEEREG 120
Query: 116 PDRDRA 99
R+RA
Sbjct: 121 RRRERA 126
>07_03_0675 + 20611460-20612053
Length = 197
Score = 29.5 bits (63), Expect = 3.5
Identities = 38/126 (30%), Positives = 49/126 (38%), Gaps = 10/126 (7%)
Frame = -1
Query: 446 MAGKHLR*PEGEASAVAAHPVRENR-ADRLDGSEAGRR---VRQAARPRLQHGPPRVEPP 279
M G+ E + A AA R NR A ++G A R A + P VE
Sbjct: 1 MGGRKDAGDEEDGEAGAATVFRRNRGAAGVEGGVAEPREVVATSAGARETRQWRPEVEQW 60
Query: 278 RSNYTFAG---AP-FPPRAKVXTP--PVIGSERLRLQVPGWRPGEQARRLEGDGAVSSDR 117
R + FAG +P PR T V R + P P + RRLE GA +
Sbjct: 61 RQRHCFAGENASPVLSPRNGGLTEGEEVAARPREKTARPDGAPARRERRLEAAGAEEREG 120
Query: 116 PDRDRA 99
R+RA
Sbjct: 121 RRRERA 126
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/85 (27%), Positives = 30/85 (35%), Gaps = 1/85 (1%)
Frame = -1
Query: 467 QVPAETTMAGKHLR*PEGEASAVAAHPVRENRADRLDGSEAGRRVRQAARPRL-QHGPPR 291
Q P T G H P + S A P + + + +Q P Q GPP
Sbjct: 3 QPPPPTMNGGHHAAPPPPQVSG--APPPPHGHYQQQPPPQPYCQQQQPLPPHYYQAGPPH 60
Query: 290 VEPPRSNYTFAGAPFPPRAKVXTPP 216
PP+ G P PP + PP
Sbjct: 61 APPPQQPPAMWGQPPPPPPQYAPPP 85
>07_01_0568 -
4216898-4216911,4216997-4217024,4217265-4217335,
4218026-4218140,4218245-4218314,4218552-4218646,
4219320-4219379,4219476-4219547,4219676-4219819
Length = 222
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 290 VEPPRSNYTFAGAPFPPRAKVXTPP 216
+ PP + TFAGAP PP + PP
Sbjct: 2 ITPPVAGDTFAGAPPPPSQEEDAPP 26
>11_01_0315 -
2347254-2347345,2347485-2347895,2348182-2349633,
2349688-2350045,2350818-2351177,2351321-2351419,
2351856-2351948,2352078-2352215,2352389-2352476,
2352682-2352770,2353113-2353178,2353370-2353481,
2354702-2354901
Length = 1185
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -1
Query: 410 ASAVAAHPVRENRADRLDGSEAGRRVRQA-ARPRLQHGPPRVEPPR--SNYTFAGAPFPP 240
A AV HP + A S R R++ R+EPPR S+ F +P PP
Sbjct: 422 AVAVFPHPPSQRAAAAAGASRVPAIASSPRGRRRIEGSGRRIEPPRPPSHRGFRPSPPPP 481
Query: 239 RAKVXTPPV 213
+PP+
Sbjct: 482 GVAYNSPPL 490
>10_07_0053 -
12406958-12407011,12407012-12407168,12407280-12407410,
12407592-12407727,12407953-12408224,12408604-12408893,
12408984-12409285,12409359-12409424,12409506-12409571,
12409855-12409926,12410013-12410084,12410207-12410281,
12410367-12410438,12410531-12410663,12411556-12411655
Length = 665
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1
Query: 130 TAPSPSRRRACSPGRH 177
TAP PSR R SPGRH
Sbjct: 237 TAPPPSRNRKKSPGRH 252
>07_03_1387 +
26202975-26203274,26203363-26203449,26203541-26203648,
26203708-26203980,26205242-26205355,26205900-26206268
Length = 416
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 52 TLGSFSVTSRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRH 177
T S V++RRC V A+ R+ + P+ +RRR +P RH
Sbjct: 23 TAASRGVSARRCSVAPAQVRARGPTEWWPAAARRRR-APRRH 63
>06_03_1501 +
30612643-30613310,30613396-30613501,30613732-30613934,
30614211-30614502
Length = 422
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 351 RTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHGCFGRYLHXIXGREPTA 497
+ VE + LADWV + G T TG C+G L + ++P+A
Sbjct: 190 KNVEMLSEHLADWVSEEDGKKIVFHTFSNTGWLCYGVILENLQRQDPSA 238
>04_04_0146 + 23106325-23108154
Length = 609
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -1
Query: 341 RRVRQAARPRLQHG-PPRVEPPRSNYTFAGAPFPPRAKVXTPPVIGSERLRLQVP 180
R +R RPR P + PP +A P PP+A P ++ + + L +P
Sbjct: 3 RALRLRHRPRRPPPVPAQAPPPSPRPWYAAPPPPPQAAAADPLLVAASEVALALP 57
>03_05_0750 -
27383848-27383940,27384016-27384137,27384525-27384578,
27384682-27384783,27386838-27387087
Length = 206
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 64 FSVT-SRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTW 189
FS T SRRCD SA G + S +RRRAC R W
Sbjct: 26 FSGTISRRCDAVSAVG--GANSGNGWSKARRRACGSSRERDGW 66
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 97 SARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 201
+ + R + +PSPS RR+ S R P +RR R
Sbjct: 505 TVEEKDARGKSRSPSPSARRSKSRSRSPIKYRRSR 539
>09_04_0667 - 19323771-19323858,19324022-19324076,19324582-19325185
Length = 248
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 93 PQRAIAVRAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRXD 230
P+ VR + G V + L AP L AL+ DY+W+ +
Sbjct: 12 PELRALVREVVGECRVQVRSVAALRDAPEMYLALSALSVDYQWQVE 57
>09_04_0379 - 17094540-17094868,17095354-17095717
Length = 230
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 427 VSRKVRHPRSRPTQSARTGRTASTVRRPADG 335
+ R++RH +PT AR G + +PA G
Sbjct: 179 IPRRIRHDLEKPTDGARAGGRKRGIGKPAFG 209
>08_01_0585 + 5187545-5187961
Length = 138
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +1
Query: 67 SVTSRRCDVRSARSRSGRSEDTAPSPS---RRRACSPGRHPGTWRRRR 201
+++SRR + R + E P P+ RRR C G PG R+R
Sbjct: 75 TLSSRRLAAKRRRPHAAIEERRRPRPAAAERRRPCVAGGRPGKKERKR 122
>07_03_1285 +
25477542-25477625,25477776-25477832,25477973-25478040,
25478187-25478391,25478429-25478586,25478865-25478940,
25479065-25479124,25479186-25479236,25479663-25479741,
25480183-25480271
Length = 308
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Frame = -2
Query: 499 CAVGSLPXXLCKYRPKQPWPVSICVSRKVRHPR------SRPTQSARTGRTASTVRRPAD 338
C G +P +C+ +P PV CV H + S QS + +ST ++ A+
Sbjct: 118 CKCG-MPLCICEAPKPEPVPVKFCVPPPNEHMQQSISTTSSSAQSNPRPKKSSTNQQSAE 176
Query: 337 GSAKRRDHASSTD 299
S K+ SS++
Sbjct: 177 SSVKKASATSSSN 189
>07_03_0565 - 19561078-19561425,19562253-19563746
Length = 613
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 142 PSRRRACSPGRHPGTWRRRR-SLPITGGVXTFALGGKGAPAKV*FERGGSTLGGPCWR 312
P RR +P H T +RRR S+ + + A G+G F R +T GG W+
Sbjct: 385 PGRRSVAAPPSHMATPQRRRNSVDVPRRLPACASVGRGEGGV--FGRHATTTGGARWK 440
>03_02_0045 -
5251234-5251305,5251362-5251419,5252256-5252539,
5252836-5253019,5253564-5253814,5253921-5254024,
5254143-5254281
Length = 363
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 320 RPRLQHGPPRVEPPRSNYTFAGAPFPPRAKVXTPPVIGS 204
R RL+ G R+ P R + + A P PP TPP G+
Sbjct: 10 RRRLRGGGHRLLPSRPSTSAASQPPPPPPSAATPPPPGA 48
>09_02_0622 -
11310941-11311472,11312776-11312813,11312875-11312926,
11313891-11314270
Length = 333
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -1
Query: 200 RLRLQVPG--WRPGEQARRLEGDGAVSSDRPDRDR 102
R R PG WR E A RL+G G S+D R R
Sbjct: 21 RWRRGGPGLAWRSAEAAGRLDGGGGASADATGRRR 55
>07_03_0860 + 22057309-22058453,22059833-22059964,22060328-22060412,
22061666-22061867,22062273-22062344,22062509-22062573,
22062682-22062741,22063033-22064379,22064463-22064607,
22064688-22067442,22068540-22068630,22068655-22068873
Length = 2105
Score = 28.3 bits (60), Expect = 8.1
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Frame = -1
Query: 362 LDGSEAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAKVXTPPVIGSERLRLQV 183
L G+ A + +Q P +QH +++PP + AG P+ P A T + G + +
Sbjct: 715 LHGANAPQVAQQMYIPTIQHHH-QLQPPTMMHQAAGIPYGPAAHQLT-QMSGMMNVGV-A 771
Query: 182 PGWRPGEQARRLEG---DGAVSSDRPDRDRALRTSQRRD 75
P + P + + + G V PD L+ +R D
Sbjct: 772 PQFTPQQPNKYVTGPTRKTTVKITHPDTHEELKLDKRMD 810
>07_01_0217 +
1620625-1621419,1621982-1622152,1622581-1622865,
1623113-1623262
Length = 466
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -1
Query: 434 HLR*PEGEASAVAAHPVRENRADRLDGSEAGRRVRQAARPRLQ 306
HLR P G A A A ++ R+DG E GR V PRL+
Sbjct: 106 HLRPPPGGAFAALATATIQSC--RVDGGELGRLVSSPQCPRLE 146
>05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149
Length = 297
Score = 28.3 bits (60), Expect = 8.1
Identities = 28/105 (26%), Positives = 45/105 (42%)
Frame = -1
Query: 416 GEASAVAAHPVRENRADRLDGSEAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPR 237
GEA+A AA + D DG EA +R RP+L+ PP + + P +
Sbjct: 165 GEAAASAAKQEAKGNGDG-DG-EAAPLLR---RPQLRSDYSTHRPPPGGRSRGRSRHPRK 219
Query: 236 AKVXTPPVIGSERLRLQVPGWRPGEQARRLEGDGAVSSDRPDRDR 102
A+ +P + G +R P WR ++ R++ P +R
Sbjct: 220 AESTSPSISGGDRGSRSGP-WRQLKRWRKVASRAVQRKSLPAGER 263
>01_05_0147 +
18597194-18597643,18598347-18598681,18600073-18600147,
18600325-18600427,18601554-18601642,18602953-18603064,
18604093-18604146,18604271-18604319,18606236-18606347,
18606389-18606436,18607000-18607327
Length = 584
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +1
Query: 97 SARSRSGRSE---DTAPSPSRRRACSPGRHPGTWRRRRS 204
S RSR S+ D+A SPS A SP R P R RS
Sbjct: 21 SRRSRDASSDPDPDSASSPSPSSASSPSRSPDRRSRSRS 59
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,849,327
Number of Sequences: 37544
Number of extensions: 407795
Number of successful extensions: 2012
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1999
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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