Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_B13
(839 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 29 3.1
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 29 3.1
AF000263-10|AAM22070.1| 163|Caenorhabditis elegans Hypothetical... 29 3.1
AF000263-9|AAO21391.2| 184|Caenorhabditis elegans Hypothetical ... 29 3.1
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 29 3.1
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 29 3.1
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 28 7.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 7.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 7.2
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 28 7.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 7.2
Z75547-4|CAA99900.1| 201|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical pr... 28 9.5
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +1
Query: 76 SRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRS 204
SR + R R S+ +P+P RRR SP + P RRRRS
Sbjct: 429 SRSKSPPAPRRRRSPSQSKSPAPRRRR--SPSKSPQAPRRRRS 469
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +1
Query: 61 SFSVTSRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 201
S++ +RR RS R GRS + SPSRRR R + RRRR
Sbjct: 25 SWAREARRSRSRSRDRRGGRSR--SRSPSRRRTSRDRRDDRSSRRRR 69
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +1
Query: 61 SFSVTSRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 201
S++ +RR RS R GRS + SPSRRR R + RRRR
Sbjct: 53 SWAREARRSRSRSRDRRGGRSR--SRSPSRRRTSRDRRDDRSSRRRR 97
>AF000263-10|AAM22070.1| 163|Caenorhabditis elegans Hypothetical
protein T08B2.5d protein.
Length = 163
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +1
Query: 61 SFSVTSRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 201
S++ +RR RS R GRS + SPSRRR R + RRRR
Sbjct: 111 SWAREARRSRSRSRDRRGGRSR--SRSPSRRRTSRDRRDDRSSRRRR 155
>AF000263-9|AAO21391.2| 184|Caenorhabditis elegans Hypothetical
protein T08B2.5e protein.
Length = 184
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +1
Query: 61 SFSVTSRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 201
S++ +RR RS R GRS + SPSRRR R + RRRR
Sbjct: 132 SWAREARRSRSRSRDRRGGRSR--SRSPSRRRTSRDRRDDRSSRRRR 176
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +1
Query: 61 SFSVTSRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 201
S++ +RR RS R GRS + SPSRRR R + RRRR
Sbjct: 111 SWAREARRSRSRSRDRRGGRSR--SRSPSRRRTSRDRRDDRSSRRRR 155
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +1
Query: 61 SFSVTSRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 201
S++ +RR RS R GRS + SPSRRR R + RRRR
Sbjct: 112 SWAREARRSRSRSRDRRGGRSR--SRSPSRRRTSRDRRDDRSSRRRR 156
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -1
Query: 383 RENRADRLDGSEAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAKVXTP 219
R+ A+ +EA R R+ R R P PPR+N P PP + P
Sbjct: 63 RQQSAEERARAEADARRRERCRNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQP 117
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -1
Query: 383 RENRADRLDGSEAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAKVXTP 219
R+ A+ +EA R R+ R R P PPR+N P PP + P
Sbjct: 63 RQQSAEERARAEADARRRERCRNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQP 117
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -1
Query: 383 RENRADRLDGSEAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAKVXTP 219
R+ A+ +EA R R+ R R P PPR+N P PP + P
Sbjct: 63 RQQSAEERARAEADARRRERCRNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQP 117
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = -1
Query: 317 PRLQHGPPRVEPPRSNYTFAGAPFPPRAKVXTPPVIGSERLRLQVPGWRP 168
P + GPP PP G P PP PP+ G PG P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = -1
Query: 317 PRLQHGPPRVEPPRSNYTFAGAPFPPRAKVXTPPVIGSERLRLQVPGWRP 168
P + GPP PP G P PP PP+ G PG P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -1
Query: 356 GSEAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAKVXTPP 216
G+ G RQA + H PP V PP+ A P P + V PP
Sbjct: 259 GARHGSISRQATLTFVSHKPPPVNPPQP----AVPPKPAKISVADPP 301
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = -1
Query: 317 PRLQHGPPRVEPPRSNYTFAGAPFPPRAKVXTPPVIGSERLRLQVPGWRP 168
P + GPP PP G P PP PP+ G PG P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
>Z75547-4|CAA99900.1| 201|Caenorhabditis elegans Hypothetical
protein R11D1.3 protein.
Length = 201
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 547 VCXXVCSXXRSAQWWHCAVGSLP 479
+C V + SA+WW CA+ LP
Sbjct: 163 ICKKVVNQHVSAKWWGCALKLLP 185
>Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical
protein R09A8.1 protein.
Length = 1095
Score = 27.9 bits (59), Expect = 9.5
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Frame = -1
Query: 308 QHGPPRVEPPRSNYTFAGAPFPPRAKVXTPPVI-GSERLRLQVPGWRPGEQARRLEGDGA 132
Q+ P ++P + AGA PPRA V P I GS + + A+ + +
Sbjct: 691 QNSAPPIKPMKKE---AGALLPPRAVVYKLPAIKGSMKDAISAHKLLKKSYAKPIVDISS 747
Query: 131 VSSDR-----PDRDRALRTSQRRDVTLKEPNVSITIXDFRESF 18
S D DR+ + +R++ K+P S D R S+
Sbjct: 748 TSGDSDPEWWSDRELTADLNFKRELLSKKPRFSRKTFDERSSY 790
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,307,698
Number of Sequences: 27780
Number of extensions: 264334
Number of successful extensions: 996
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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