Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_B08
(868 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 46 6e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 45 8e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 42 6e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 41 2e-05
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 41 2e-05
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 40 2e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 40 3e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 40 3e-05
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 40 4e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 39 5e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 39 5e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 39 5e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 39 5e-05
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 37 2e-04
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 36 5e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 36 5e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 36 5e-04
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 26 0.39
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 24 2.1
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.4
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 45.6 bits (103), Expect = 6e-07
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 233 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 406
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 407 GDYALRARVSNNGS 448
G Y V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 45.6 bits (103), Expect = 6e-07
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 233 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 406
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 407 GDYALRARVSNNGS 448
G Y V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 45.2 bits (102), Expect = 8e-07
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 233 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 406
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNNGS 448
G Y V++NGS
Sbjct: 85 GTYQTSVVVTHNGS 98
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Frame = +2
Query: 233 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 406
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWP--QRHADL 529
G Y V+++GS + + M + +P +H D+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDM 127
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 233 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 406
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNNGS 448
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 233 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 406
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNNGS 448
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 233 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 406
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNNGS 448
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 233 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 406
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNNGS 448
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 42.3 bits (95), Expect = 6e-06
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGEWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 448
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 40.7 bits (91), Expect = 2e-05
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +2
Query: 164 RTIGSLPPHSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CST 337
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 338 WLVXSERLWRPDVVLLNAA 394
V SE +W PD+VL N A
Sbjct: 95 LHVPSEHIWLPDIVLYNNA 113
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 40.7 bits (91), Expect = 2e-05
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 197 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VXSERLW 364
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 365 RPDVVLLNAA 394
PD+VL N A
Sbjct: 104 LPDIVLYNNA 113
Score = 22.2 bits (45), Expect = 6.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 510 PNDMQTCTFKFGPRMHNSDXMD 575
P D QTC KFG ++ +D
Sbjct: 153 PFDQQTCFMKFGSWTYDGIQID 174
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 40.3 bits (90), Expect = 2e-05
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGEWGCSTWL-VXSERLWRPDVVLLNAA 394
++ +W D +L W+ E+G L V S+ +WRPD+VL N A
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNA 117
Score = 22.2 bits (45), Expect = 6.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 510 PNDMQTCTFKFGPRMHNSDXMD 575
P D QTC KFG ++ +D
Sbjct: 157 PFDEQTCVMKFGSWTYDGFQVD 178
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.9 bits (89), Expect = 3e-05
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +2
Query: 194 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VXSERLWR 367
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 368 PDVVLLNAA 394
PD+VL N A
Sbjct: 113 PDIVLYNNA 121
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.9 bits (89), Expect = 3e-05
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +2
Query: 194 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VXSERLWR 367
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 368 PDVVLLNAA 394
PD+VL N A
Sbjct: 113 PDIVLYNNA 121
Score = 22.2 bits (45), Expect = 6.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 510 PNDMQTCTFKFGPRMHNSDXMD 575
P D QTC KFG ++ +D
Sbjct: 161 PFDEQTCVLKFGSWTYDGFKVD 182
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 39.5 bits (88), Expect = 4e-05
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGEWGCSTWL-VXSERLWRPDVVLLNAA 394
++ W D +L WN E+G L V SE +W PD+VL N A
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA 126
Score = 22.6 bits (46), Expect = 4.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 510 PNDMQTCTFKFGPRMHNSDXMD 575
P D Q+C KFG +N +D
Sbjct: 166 PFDEQSCIMKFGSWTYNGAQVD 187
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 39.1 bits (87), Expect = 5e-05
Identities = 31/118 (26%), Positives = 48/118 (40%), Gaps = 7/118 (5%)
Frame = +2
Query: 179 LPPHSK---IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLV 346
LP H K VV + +R + E + + + +W D RLS+ S +
Sbjct: 53 LPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIK 112
Query: 347 XSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSXIKRLDISTPISMQLDNWP 511
ER+WRPD N + + R+S +G + RL I M+L N+P
Sbjct: 113 MLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFP 170
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 39.1 bits (87), Expect = 5e-05
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +2
Query: 236 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVXSERLWRPDVVLLNAAAT---TA 406
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 407 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWP 511
R+ +G V RL I M L+N+P
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFP 138
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 39.1 bits (87), Expect = 5e-05
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +2
Query: 194 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVXSERLWR 367
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 368 PDVVLLNAAATTAGDYALR 424
PD+VL N A G+Y +R
Sbjct: 111 PDIVLFNNA---DGNYEVR 126
Score = 25.4 bits (53), Expect = 0.68
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 501 TIGPNDMQTCTFKFGPRMHNSDXMDFXI 584
T P D QTC KFG N D + +
Sbjct: 156 TYFPFDQQTCIMKFGSWTFNGDQVSLAL 183
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 39.1 bits (87), Expect = 5e-05
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 197 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPD 373
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 374 VVLLNAA 394
+L N A
Sbjct: 92 TILYNNA 98
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 37.1 bits (82), Expect = 2e-04
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 203 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVV 379
++ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 380 L 382
+
Sbjct: 122 M 122
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 35.9 bits (79), Expect = 5e-04
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +2
Query: 287 WIDKRLSWNAGEWGCSTWLVXSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 439
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 440 NGSVSXIKRLDISTPISMQLDNWPQRHADLHVQVRS 547
+GS++ RL I+ M L +P H+++ S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 35.9 bits (79), Expect = 5e-04
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +2
Query: 287 WIDKRLSWNAGEWGCSTWLVXSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 439
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 440 NGSVSXIKRLDISTPISMQLDNWPQRHADLHVQVRS 547
+GS++ RL I+ M L +P H+++ S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 35.9 bits (79), Expect = 5e-04
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +2
Query: 287 WIDKRLSWNAGEWGCSTWLVXSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 439
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 440 NGSVSXIKRLDISTPISMQLDNWPQRHADLHVQVRS 547
+GS++ RL I+ M L +P H+++ S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 26.2 bits (55), Expect = 0.39
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +3
Query: 510 PNDMQTCTFKFGPRMHNSDXMDFXIDKRIYSM 605
P D C FG +H+ + ++ +DK+ + M
Sbjct: 177 PYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.8 bits (49), Expect = 2.1
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +3
Query: 471 TLALQFLCS*TIGPNDMQTCTFKFGPRMHNSDXMDFXID 587
TL L + I P+D Q C + H +D M F D
Sbjct: 158 TLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWD 196
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 340 PSAAAPFPCVPTQS 299
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,103
Number of Sequences: 438
Number of extensions: 4805
Number of successful extensions: 74
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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