Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_B04
         (851 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC077727-1|AAH77727.1|  541|Homo sapiens DKFZP564J0863 protein p...    35   0.33 
AK023383-1|BAB14552.1|  541|Homo sapiens protein ( Homo sapiens ...    35   0.33 
BC053508-1|AAH53508.1|  412|Homo sapiens ARL6IP2 protein protein.      33   1.3  
AK097588-1|BAC05111.1|  567|Homo sapiens protein ( Homo sapiens ...    33   1.3  
AK026946-1|BAB15598.1|  579|Homo sapiens protein ( Homo sapiens ...    33   1.3  
AF449187-2|AAM97341.1|  579|Homo sapiens ARL6IP2 protein.              33   1.3  
AF449187-1|AAM97342.1|  583|Homo sapiens ARL6IP2 protein.              33   1.3  
AC016995-1|AAX88950.1|  579|Homo sapiens unknown protein.              33   1.3  

>BC077727-1|AAH77727.1|  541|Homo sapiens DKFZP564J0863 protein
           protein.
          Length = 541

 Score = 35.1 bits (77), Expect = 0.33
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = -3

Query: 483 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIFHRGNR---DVITRLPYXAFTFLWR 319
           C ++     MTS+V++ N+SQN++ DD    Q+F    R   D I + P+    FL R
Sbjct: 156 CATIFALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVR 213


>AK023383-1|BAB14552.1|  541|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13321 fis, clone OVARC1001703, weakly similar to
           Mus musculus ARL-6 interacting protein-2 (Aip-2) mRNA.
           ).
          Length = 541

 Score = 35.1 bits (77), Expect = 0.33
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = -3

Query: 483 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIFHRGNR---DVITRLPYXAFTFLWR 319
           C ++     MTS+V++ N+SQN++ DD    Q+F    R   D I + P+    FL R
Sbjct: 156 CATIFALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVR 213


>BC053508-1|AAH53508.1|  412|Homo sapiens ARL6IP2 protein protein.
          Length = 412

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = -3

Query: 483 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIFHRGNR---DVITRLPYXAFTFLWR 319
           C +V     MTS+V++ N+SQN++ DD    Q+F    R   + I + P+    FL R
Sbjct: 16  CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIR 73


>AK097588-1|BAC05111.1|  567|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40269 fis, clone TESTI2026597. ).
          Length = 567

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = -3

Query: 483 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIFHRGNR---DVITRLPYXAFTFLWR 319
           C ++     MTS+V++ ++SQN++ DD    Q+F    R   D I + P+    FL R
Sbjct: 182 CATIFALSTMTSSVQIYSLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVR 239


>AK026946-1|BAB15598.1|  579|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23293 fis, clone HEP10514. ).
          Length = 579

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = -3

Query: 483 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIFHRGNR---DVITRLPYXAFTFLWR 319
           C +V     MTS+V++ N+SQN++ DD    Q+F    R   + I + P+    FL R
Sbjct: 187 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIR 244


>AF449187-2|AAM97341.1|  579|Homo sapiens ARL6IP2 protein.
          Length = 579

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = -3

Query: 483 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIFHRGNR---DVITRLPYXAFTFLWR 319
           C +V     MTS+V++ N+SQN++ DD    Q+F    R   + I + P+    FL R
Sbjct: 187 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIR 244


>AF449187-1|AAM97342.1|  583|Homo sapiens ARL6IP2 protein.
          Length = 583

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = -3

Query: 483 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIFHRGNR---DVITRLPYXAFTFLWR 319
           C +V     MTS+V++ N+SQN++ DD    Q+F    R   + I + P+    FL R
Sbjct: 187 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIR 244


>AC016995-1|AAX88950.1|  579|Homo sapiens unknown protein.
          Length = 579

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = -3

Query: 483 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIFHRGNR---DVITRLPYXAFTFLWR 319
           C +V     MTS+V++ N+SQN++ DD    Q+F    R   + I + P+    FL R
Sbjct: 187 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIR 244


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,731,409
Number of Sequences: 237096
Number of extensions: 2069451
Number of successful extensions: 11364
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11364
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)