Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_B04
         (851 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr...    43   6e-04
BT004893-1|AAO47871.1|  541|Drosophila melanogaster RE51884p pro...    29   6.1  
AY069079-1|AAL39224.1|  541|Drosophila melanogaster GH09383p pro...    29   6.1  
AE014297-3582|AAN14008.1|  541|Drosophila melanogaster CG6668-PB...    29   6.1  
AE014297-3581|AAF56318.1|  541|Drosophila melanogaster CG6668-PA...    29   6.1  

>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
           protein.
          Length = 1053

 Score = 42.7 bits (96), Expect = 6e-04
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
 Frame = +1

Query: 304 NTXSGTPQERECXIRKSCNNVS--VTSMEDLSHEEIVTSYVLAHVAQFDCRRHHMAFTNG 477
           N  +  P   EC    +   V+   T   ++  EEI  + VLAH+A  D R   + FT+ 
Sbjct: 111 NLLNSRPTAAECYAVYASRLVTQLTTKWRNMEIEEIAVTTVLAHMANIDSRLQRVLFTSN 170

Query: 478 NTTRNKLLQEIXKSQVKLRSHNRSNN 555
             TR+KL  E+       + H R +N
Sbjct: 171 VRTRSKLQAELKAFTFDKKRHARDDN 196


>BT004893-1|AAO47871.1|  541|Drosophila melanogaster RE51884p
           protein.
          Length = 541

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = -3

Query: 483 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIFHRGNRDVIT---RLPYXAFTFLWR 319
           C +V     M S+V++ N+SQN++ DD    Q+F    R  +    + P+    FL R
Sbjct: 135 CATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQRLQFLVR 192


>AY069079-1|AAL39224.1|  541|Drosophila melanogaster GH09383p
           protein.
          Length = 541

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = -3

Query: 483 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIFHRGNRDVIT---RLPYXAFTFLWR 319
           C +V     M S+V++ N+SQN++ DD    Q+F    R  +    + P+    FL R
Sbjct: 135 CATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQRLQFLVR 192


>AE014297-3582|AAN14008.1|  541|Drosophila melanogaster CG6668-PB,
           isoform B protein.
          Length = 541

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = -3

Query: 483 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIFHRGNRDVIT---RLPYXAFTFLWR 319
           C +V     M S+V++ N+SQN++ DD    Q+F    R  +    + P+    FL R
Sbjct: 135 CATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQRLQFLVR 192


>AE014297-3581|AAF56318.1|  541|Drosophila melanogaster CG6668-PA,
           isoform A protein.
          Length = 541

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = -3

Query: 483 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIFHRGNRDVIT---RLPYXAFTFLWR 319
           C +V     M S+V++ N+SQN++ DD    Q+F    R  +    + P+    FL R
Sbjct: 135 CATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQRLQFLVR 192


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,097,004
Number of Sequences: 53049
Number of extensions: 603767
Number of successful extensions: 1146
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)