Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_B02
         (874 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    27   0.56 
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    25   4.0  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           24   7.0  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   9.2  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.2  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 27.5 bits (58), Expect = 0.56
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +2

Query: 530  SELPQFDENTYELAYNSGSTLAMRG----KYNEALSXLXRAEQACSXTVIHDGXTD 685
            +E P +  N   LAYNS S   + G    K  +++  L R E + S  V+  G TD
Sbjct: 969  NEFPSWASNKEYLAYNSPSATFLGGLTQPKQAKSVIGLFRRESSGSGGVVIGGVTD 1024


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 1/18 (5%)
 Frame = -3

Query: 491 PCWLSSHLH-THQWCSSV 441
           PCW+  HLH   QW   V
Sbjct: 442 PCWIEIHLHGPLQWLDKV 459


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -3

Query: 479 SSHLHTHQWCSSVDHGINCSSLGIAXSGIKFEPLIPLKQVSTQGHYQQ 336
           + +LH HQ  SS     + SS+  + S     P  PL  V  + ++ +
Sbjct: 100 TGYLHQHQQSSSSSSSSSSSSMSSSSSSSFSSPDSPLSLVMKKPYHDE 147


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 500 QQRPCWLSSHLH 465
           ++ PCW+  HLH
Sbjct: 720 KETPCWVEVHLH 731


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 148  TADSTK*AESISLQSGMLSPTPQLQGGS 231
            T+ ++   ++ SLQ+G+LSP   L G +
Sbjct: 3274 TSSTSGYRDNYSLQTGLLSPDGSLSGNA 3301


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,805
Number of Sequences: 2352
Number of extensions: 13230
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)