Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_B02
(874 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105583-1|AAI05584.1| 560|Homo sapiens SRP72 protein protein. 154 5e-37
BC046143-1|AAH46143.1| 559|Homo sapiens Similar to signal recog... 154 5e-37
BC040134-1|AAH40134.1| 559|Homo sapiens SRP72 protein protein. 154 5e-37
BC032609-1|AAH32609.1| 559|Homo sapiens SRP72 protein protein. 154 5e-37
BC017057-1|AAH17057.1| 559|Homo sapiens SRP72 protein protein. 154 5e-37
AF077019-1|AAC27324.1| 671|Homo sapiens signal recognition part... 154 5e-37
AF069765-1|AAC97490.1| 671|Homo sapiens signal recognition part... 154 5e-37
AF038851-1|AAQ13423.1| 671|Homo sapiens putative signal recogni... 153 8e-37
BX537991-1|CAD97950.1| 626|Homo sapiens hypothetical protein pr... 137 4e-32
BC130339-1|AAI30340.1| 554|Homo sapiens tetratricopeptide repea... 36 0.14
BC126331-1|AAI26332.1| 554|Homo sapiens tetratricopeptide repea... 36 0.14
AK022633-1|BAB14143.1| 554|Homo sapiens protein ( Homo sapiens ... 36 0.14
>BC105583-1|AAI05584.1| 560|Homo sapiens SRP72 protein protein.
Length = 560
Score = 154 bits (373), Expect = 5e-37
Identities = 89/227 (39%), Positives = 124/227 (54%), Gaps = 3/227 (1%)
Frame = +2
Query: 131 KLQGKILQIAPNEQKAFHCKVVCSLQLHNFKEALATLTNAKNSALAADLL-FEKAYAQYR 307
K KILQI ++ A HCKVVC +Q +FKEAL + N LA + L FEKAY +YR
Sbjct: 32 KTVNKILQINKDDVTALHCKVVCLIQNGSFKEALNVI-NTHTKVLANNSLSFEKAYCEYR 90
Query: 308 LNSPKEALQTVDSAPELTPALKELRAQILYRLXQYQDCYNLYRDLLKNTTDEYEDERKXX 487
LN + AL+T++SA + T LKEL Q+LYRL +Y +C +YRDL++N+ D+Y++ERK
Sbjct: 91 LNRIENALKTIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTN 150
Query: 488 XXXXXXXXXXXXP-TSELPQFDENTYELAYNSGSTLAMRGKYNEALSXLXRAEQACSXTV 664
E E T+EL YN+ L +G+ N+A+ L +AE C ++
Sbjct: 151 LSAVVAAQSNWEKVVPENLGLQEGTHELCYNTACALIGQGQLNQAMKILQKAEDLCRRSL 210
Query: 665 IHD-GXTDEXANXXPAXIXGPQAYCLQPNNXEKEPAXIYXNILKGXP 802
D T+E A I G AY LQ +E +Y I+K P
Sbjct: 211 SEDTDGTEEDPQAELAIIHGQMAYILQLQGRTEEALQLYNQIIKLKP 257
>BC046143-1|AAH46143.1| 559|Homo sapiens Similar to signal
recognition particle 72kDa protein.
Length = 559
Score = 154 bits (373), Expect = 5e-37
Identities = 89/227 (39%), Positives = 124/227 (54%), Gaps = 3/227 (1%)
Frame = +2
Query: 131 KLQGKILQIAPNEQKAFHCKVVCSLQLHNFKEALATLTNAKNSALAADLL-FEKAYAQYR 307
K KILQI ++ A HCKVVC +Q +FKEAL + N LA + L FEKAY +YR
Sbjct: 32 KTVNKILQINKDDVTALHCKVVCLIQNGSFKEALNVI-NTHTKVLANNSLSFEKAYCEYR 90
Query: 308 LNSPKEALQTVDSAPELTPALKELRAQILYRLXQYQDCYNLYRDLLKNTTDEYEDERKXX 487
LN + AL+T++SA + T LKEL Q+LYRL +Y +C +YRDL++N+ D+Y++ERK
Sbjct: 91 LNRIENALKTIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTN 150
Query: 488 XXXXXXXXXXXXP-TSELPQFDENTYELAYNSGSTLAMRGKYNEALSXLXRAEQACSXTV 664
E E T+EL YN+ L +G+ N+A+ L +AE C ++
Sbjct: 151 LSAVVAAQSNWEKVVPENLGLQEGTHELCYNTACALIGQGQLNQAMKILQKAEDLCRRSL 210
Query: 665 IHD-GXTDEXANXXPAXIXGPQAYCLQPNNXEKEPAXIYXNILKGXP 802
D T+E A I G AY LQ +E +Y I+K P
Sbjct: 211 SEDTDGTEEDPQAELAIIHGQMAYILQLQGRTEEALQLYNQIIKLKP 257
>BC040134-1|AAH40134.1| 559|Homo sapiens SRP72 protein protein.
Length = 559
Score = 154 bits (373), Expect = 5e-37
Identities = 89/227 (39%), Positives = 124/227 (54%), Gaps = 3/227 (1%)
Frame = +2
Query: 131 KLQGKILQIAPNEQKAFHCKVVCSLQLHNFKEALATLTNAKNSALAADLL-FEKAYAQYR 307
K KILQI ++ A HCKVVC +Q +FKEAL + N LA + L FEKAY +YR
Sbjct: 32 KTVNKILQINKDDVTALHCKVVCLIQNGSFKEALNVI-NTHTKVLANNSLSFEKAYCEYR 90
Query: 308 LNSPKEALQTVDSAPELTPALKELRAQILYRLXQYQDCYNLYRDLLKNTTDEYEDERKXX 487
LN + AL+T++SA + T LKEL Q+LYRL +Y +C +YRDL++N+ D+Y++ERK
Sbjct: 91 LNRIENALKTIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTN 150
Query: 488 XXXXXXXXXXXXP-TSELPQFDENTYELAYNSGSTLAMRGKYNEALSXLXRAEQACSXTV 664
E E T+EL YN+ L +G+ N+A+ L +AE C ++
Sbjct: 151 LSAVVAAQSNWEKVVPENLGLQEGTHELCYNTACALIGQGQLNQAMKILQKAEDLCRRSL 210
Query: 665 IHD-GXTDEXANXXPAXIXGPQAYCLQPNNXEKEPAXIYXNILKGXP 802
D T+E A I G AY LQ +E +Y I+K P
Sbjct: 211 SEDTDGTEEDPQAELAIIHGQMAYILQLQGRTEEALQLYNQIIKLKP 257
>BC032609-1|AAH32609.1| 559|Homo sapiens SRP72 protein protein.
Length = 559
Score = 154 bits (373), Expect = 5e-37
Identities = 89/227 (39%), Positives = 124/227 (54%), Gaps = 3/227 (1%)
Frame = +2
Query: 131 KLQGKILQIAPNEQKAFHCKVVCSLQLHNFKEALATLTNAKNSALAADLL-FEKAYAQYR 307
K KILQI ++ A HCKVVC +Q +FKEAL + N LA + L FEKAY +YR
Sbjct: 32 KTVNKILQINKDDVTALHCKVVCLIQNGSFKEALNVI-NTHTKVLANNSLSFEKAYCEYR 90
Query: 308 LNSPKEALQTVDSAPELTPALKELRAQILYRLXQYQDCYNLYRDLLKNTTDEYEDERKXX 487
LN + AL+T++SA + T LKEL Q+LYRL +Y +C +YRDL++N+ D+Y++ERK
Sbjct: 91 LNRIENALKTIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTN 150
Query: 488 XXXXXXXXXXXXP-TSELPQFDENTYELAYNSGSTLAMRGKYNEALSXLXRAEQACSXTV 664
E E T+EL YN+ L +G+ N+A+ L +AE C ++
Sbjct: 151 LSAVVAAQSNWEKVVPENLGLQEGTHELCYNTACALIGQGQLNQAMKILQKAEDLCRRSL 210
Query: 665 IHD-GXTDEXANXXPAXIXGPQAYCLQPNNXEKEPAXIYXNILKGXP 802
D T+E A I G AY LQ +E +Y I+K P
Sbjct: 211 SEDTDGTEENPQAELAIIHGQMAYILQLQGRTEEALQLYNQIIKLKP 257
>BC017057-1|AAH17057.1| 559|Homo sapiens SRP72 protein protein.
Length = 559
Score = 154 bits (373), Expect = 5e-37
Identities = 89/227 (39%), Positives = 124/227 (54%), Gaps = 3/227 (1%)
Frame = +2
Query: 131 KLQGKILQIAPNEQKAFHCKVVCSLQLHNFKEALATLTNAKNSALAADLL-FEKAYAQYR 307
K KILQI ++ A HCKVVC +Q +FKEAL + N LA + L FEKAY +YR
Sbjct: 32 KTVNKILQINKDDVTALHCKVVCLIQNGSFKEALNVI-NTHTKVLANNSLSFEKAYCEYR 90
Query: 308 LNSPKEALQTVDSAPELTPALKELRAQILYRLXQYQDCYNLYRDLLKNTTDEYEDERKXX 487
LN + AL+T++SA + T LKEL Q+LYRL +Y +C +YRDL++N+ D+Y++ERK
Sbjct: 91 LNRIENALKTIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTN 150
Query: 488 XXXXXXXXXXXXP-TSELPQFDENTYELAYNSGSTLAMRGKYNEALSXLXRAEQACSXTV 664
E E T+EL YN+ L +G+ N+A+ L +AE C ++
Sbjct: 151 LSAVVAAQSNWEKVVPENLGLQEGTHELCYNTACALIGQGQLNQAMKILQKAEDLCRRSL 210
Query: 665 IHD-GXTDEXANXXPAXIXGPQAYCLQPNNXEKEPAXIYXNILKGXP 802
D T+E A I G AY LQ +E +Y I+K P
Sbjct: 211 SEDTDGTEEDPQAELAIIHGQMAYILQLQGRTEEALQLYNQIIKLKP 257
>AF077019-1|AAC27324.1| 671|Homo sapiens signal recognition
particle 72 protein.
Length = 671
Score = 154 bits (373), Expect = 5e-37
Identities = 89/227 (39%), Positives = 124/227 (54%), Gaps = 3/227 (1%)
Frame = +2
Query: 131 KLQGKILQIAPNEQKAFHCKVVCSLQLHNFKEALATLTNAKNSALAADLL-FEKAYAQYR 307
K KILQI ++ A HCKVVC +Q +FKEAL + N LA + L FEKAY +YR
Sbjct: 32 KTVNKILQINKDDVTALHCKVVCLIQNGSFKEALNVI-NTHTKVLANNSLSFEKAYCEYR 90
Query: 308 LNSPKEALQTVDSAPELTPALKELRAQILYRLXQYQDCYNLYRDLLKNTTDEYEDERKXX 487
LN + AL+T++SA + T LKEL Q+LYRL +Y +C +YRDL++N+ D+Y++ERK
Sbjct: 91 LNRIENALKTIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTN 150
Query: 488 XXXXXXXXXXXXP-TSELPQFDENTYELAYNSGSTLAMRGKYNEALSXLXRAEQACSXTV 664
E E T+EL YN+ L +G+ N+A+ L +AE C ++
Sbjct: 151 LSAVVAAQSNWEKVVPENLGLQEGTHELCYNTACALIGQGQLNQAMKILQKAEDLCRRSL 210
Query: 665 IHD-GXTDEXANXXPAXIXGPQAYCLQPNNXEKEPAXIYXNILKGXP 802
D T+E A I G AY LQ +E +Y I+K P
Sbjct: 211 SEDTDGTEEDPQAELAIIHGQMAYILQLQGRTEEALQLYNQIIKLKP 257
>AF069765-1|AAC97490.1| 671|Homo sapiens signal recognition
particle 72 protein.
Length = 671
Score = 154 bits (373), Expect = 5e-37
Identities = 89/227 (39%), Positives = 124/227 (54%), Gaps = 3/227 (1%)
Frame = +2
Query: 131 KLQGKILQIAPNEQKAFHCKVVCSLQLHNFKEALATLTNAKNSALAADLL-FEKAYAQYR 307
K KILQI ++ A HCKVVC +Q +FKEAL + N LA + L FEKAY +YR
Sbjct: 32 KTVNKILQINKDDVTALHCKVVCLIQNGSFKEALNVI-NTHTKVLANNSLSFEKAYCEYR 90
Query: 308 LNSPKEALQTVDSAPELTPALKELRAQILYRLXQYQDCYNLYRDLLKNTTDEYEDERKXX 487
LN + AL+T++SA + T LKEL Q+LYRL +Y +C +YRDL++N+ D+Y++ERK
Sbjct: 91 LNRIENALKTIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTN 150
Query: 488 XXXXXXXXXXXXP-TSELPQFDENTYELAYNSGSTLAMRGKYNEALSXLXRAEQACSXTV 664
E E T+EL YN+ L +G+ N+A+ L +AE C ++
Sbjct: 151 LSAVVAAQSNWEKVVPENLGLQEGTHELCYNTACALIGQGQLNQAMKILQKAEDLCRRSL 210
Query: 665 IHD-GXTDEXANXXPAXIXGPQAYCLQPNNXEKEPAXIYXNILKGXP 802
D T+E A I G AY LQ +E +Y I+K P
Sbjct: 211 SEDTDGTEEDPQAELAIIHGQMAYILQLQGRTEEALQLYNQIIKLKP 257
>AF038851-1|AAQ13423.1| 671|Homo sapiens putative signal
recognition particle protein.
Length = 671
Score = 153 bits (371), Expect = 8e-37
Identities = 89/227 (39%), Positives = 123/227 (54%), Gaps = 3/227 (1%)
Frame = +2
Query: 131 KLQGKILQIAPNEQKAFHCKVVCSLQLHNFKEALATLTNAKNSALAADLL-FEKAYAQYR 307
K KILQI ++ A HCKVVC +Q +FKEAL + N LA + L FEKAY +YR
Sbjct: 32 KTVNKILQINKDDVTALHCKVVCLIQNGSFKEALNVI-NTHTKVLANNSLSFEKAYCEYR 90
Query: 308 LNSPKEALQTVDSAPELTPALKELRAQILYRLXQYQDCYNLYRDLLKNTTDEYEDERKXX 487
LN + AL+T++SA + T LKEL Q+LYRL +Y +C +YRDL++N+ D+Y++ERK
Sbjct: 91 LNRIENALKTIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTN 150
Query: 488 XXXXXXXXXXXXP-TSELPQFDENTYELAYNSGSTLAMRGKYNEALSXLXRAEQACSXTV 664
E E T+EL YN+ L +G+ N+A+ L AE C ++
Sbjct: 151 LSAVVAAQSNWEKVVPENLGLQEGTHELCYNTACALIGQGQLNQAMKILQEAEDLCRRSL 210
Query: 665 IHD-GXTDEXANXXPAXIXGPQAYCLQPNNXEKEPAXIYXNILKGXP 802
D T+E A I G AY LQ +E +Y I+K P
Sbjct: 211 SEDTDGTEEDPQAELAIIHGQMAYILQLQGRTEEALQLYNQIIKLKP 257
>BX537991-1|CAD97950.1| 626|Homo sapiens hypothetical protein
protein.
Length = 626
Score = 137 bits (332), Expect = 4e-32
Identities = 75/183 (40%), Positives = 106/183 (57%), Gaps = 2/183 (1%)
Frame = +2
Query: 131 KLQGKILQIAPNEQKAFHCKVVCSLQLHNFKEALATLTNAKNSALAADLL-FEKAYAQYR 307
K KILQI ++ A HCKVVC +Q +FKEAL + N LA + L FEKAY +YR
Sbjct: 38 KTVNKILQINKDDVTALHCKVVCLIQNGSFKEALNVI-NTHTKVLANNSLSFEKAYCEYR 96
Query: 308 LNSPKEALQTVDSAPELTPALKELRAQILYRLXQYQDCYNLYRDLLKNTTDEYEDERKXX 487
LN + AL+T++SA + T LKEL Q+LYRL +Y +C +YRDL++N+ D+Y++ERK
Sbjct: 97 LNRIENALKTIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTN 156
Query: 488 XXXXXXXXXXXXP-TSELPQFDENTYELAYNSGSTLAMRGKYNEALSXLXRAEQACSXTV 664
E E T+EL YN+ L +G+ N+A+ L +AE C ++
Sbjct: 157 LSAVVAAQSNWEKVVPENLGLQEGTHELCYNTACALIGQGQLNQAMKILQKAEDLCRRSL 216
Query: 665 IHD 673
D
Sbjct: 217 SED 219
>BC130339-1|AAI30340.1| 554|Homo sapiens tetratricopeptide repeat
domain 26 protein.
Length = 554
Score = 36.3 bits (80), Expect = 0.14
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Frame = +2
Query: 149 LQIAPNEQKAFHCKVVCSLQLHNFKEALATLTNAKNSALAADLLFEKAYAQYRLNSPKEA 328
LQ P+ A + K +L+N + A A L + ++A ++ F K ++ L +
Sbjct: 212 LQQIPDSTIALNLKACNHFRLYNGRAAEAELKSLMDNA-SSSFEFAKELIRHNLVVFRGG 270
Query: 329 LQTVDSAPELTPALKELRAQ-ILYRLXQ--YQDCYNLYRDLLKNTTDEY 466
+ P L + E R ++Y L Q Q+ YNL +DL T EY
Sbjct: 271 EGALQVLPPLVDVIPEARLNLVIYYLRQDDVQEAYNLIKDLEPTTPQEY 319
>BC126331-1|AAI26332.1| 554|Homo sapiens tetratricopeptide repeat
domain 26 protein.
Length = 554
Score = 36.3 bits (80), Expect = 0.14
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Frame = +2
Query: 149 LQIAPNEQKAFHCKVVCSLQLHNFKEALATLTNAKNSALAADLLFEKAYAQYRLNSPKEA 328
LQ P+ A + K +L+N + A A L + ++A ++ F K ++ L +
Sbjct: 212 LQQIPDSTIALNLKACNHFRLYNGRAAEAELKSLMDNA-SSSFEFAKELIRHNLVVFRGG 270
Query: 329 LQTVDSAPELTPALKELRAQ-ILYRLXQ--YQDCYNLYRDLLKNTTDEY 466
+ P L + E R ++Y L Q Q+ YNL +DL T EY
Sbjct: 271 EGALQVLPPLVDVIPEARLNLVIYYLRQDDVQEAYNLIKDLEPTTPQEY 319
>AK022633-1|BAB14143.1| 554|Homo sapiens protein ( Homo sapiens
cDNA FLJ12571 fis, clone NT2RM4000950. ).
Length = 554
Score = 36.3 bits (80), Expect = 0.14
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Frame = +2
Query: 149 LQIAPNEQKAFHCKVVCSLQLHNFKEALATLTNAKNSALAADLLFEKAYAQYRLNSPKEA 328
LQ P+ A + K +L+N + A A L + ++A ++ F K ++ L +
Sbjct: 212 LQQIPDSTIALNLKACNHFRLYNGRAAEAELKSLMDNA-SSSFEFAKELIRHNLVVFRGG 270
Query: 329 LQTVDSAPELTPALKELRAQ-ILYRLXQ--YQDCYNLYRDLLKNTTDEY 466
+ P L + E R ++Y L Q Q+ YNL +DL T EY
Sbjct: 271 EGALQVLPPLVDVIPEARLNLVIYYLRQDDVQEAYNLIKDLEPTTPQEY 319
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,805,209
Number of Sequences: 237096
Number of extensions: 1894286
Number of successful extensions: 4139
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4129
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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