Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_B02
         (874 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical p...    82   6e-16
Z75526-7|CAE17729.1|  325|Caenorhabditis elegans Hypothetical pr...    32   0.47 
Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical pr...    30   2.5  
AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical ...    30   2.5  
AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical ...    30   2.5  
AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical ...    30   2.5  
AL021171-3|CAB54258.1|  749|Caenorhabditis elegans Hypothetical ...    30   2.5  
AL021171-2|CAA15957.1|  747|Caenorhabditis elegans Hypothetical ...    30   2.5  
AF003138-5|AAL77178.1|  488|Caenorhabditis elegans Hypothetical ...    29   4.3  
AF003138-4|ABD94108.1|  400|Caenorhabditis elegans Hypothetical ...    29   4.3  
AF003138-3|AAM15568.1|  504|Caenorhabditis elegans Hypothetical ...    29   4.3  
AF003138-2|AAM15567.1|  546|Caenorhabditis elegans Hypothetical ...    29   4.3  
Z66512-9|CAA91328.3|  253|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z48638-12|CAA88573.3|  253|Caenorhabditis elegans Hypothetical p...    28   7.6  
U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical
           protein F08D12.1 protein.
          Length = 694

 Score = 81.8 bits (193), Expect = 6e-16
 Identities = 55/215 (25%), Positives = 93/215 (43%)
 Frame = +2

Query: 143 KILQIAPNEQKAFHCKVVCSLQLHNFKEALATLTNAKNSALAADLLFEKAYAQYRLNSPK 322
           K+++  P E  AF CK+V  +QL  + +AL  +       +   + FEKAY  YR +   
Sbjct: 34  KLIRKYPKETFAFKCKLVAQIQLSQYADALELIRKTPAHQMG-HVGFEKAYIHYRQDELD 92

Query: 323 EALQTVDSAPELTPALKELRAQILYRLXQYQDCYNLYRDLLKNTTDEYEDERKXXXXXXX 502
           EA++ +++  +      EL+AQ+ Y+   YQ  Y++Y  LLKN +D+  DE +       
Sbjct: 93  EAIKELNTCDKDDVKALELKAQVFYKQENYQQAYDIYLYLLKNHSDD-SDELRRANFLAV 151

Query: 503 XXXXXXXPTSELPQFDENTYELAYNSGSTLAMRGKYNEALSXLXRAEQACSXTVIHDGXT 682
                     +     E++Y   YN         K  +AL  L +A + C  +   +   
Sbjct: 152 QARLEAQGVKQAVAETEDSYSQLYNRACVEIEAEKLPQALESLEKALKTCRKSFEDEDRE 211

Query: 683 DEXANXXPAXIXGPQAYCLQPNNXEKEPAXIYXNI 787
           ++        I   +AY LQ    + E   IY  +
Sbjct: 212 EDEIEEELDSIRVQKAYVLQRMGQKAEALAIYEKV 246


>Z75526-7|CAE17729.1|  325|Caenorhabditis elegans Hypothetical
           protein C06H2.7 protein.
          Length = 325

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +2

Query: 203 LQLHNFKEALATLTNAKNSALAADLLFEKAYAQYRLNSPK-EALQTVDSAPELTPALKEL 379
           L +  F E +AT+ N K+  +   LLF +    +RLN  +  A  T  S P +   + E 
Sbjct: 197 LNIGKFDEMVATVNNIKDLRIRQQLLFFQLITIFRLNIARINASVTAASLPLIVECINEW 256

Query: 380 RA 385
           RA
Sbjct: 257 RA 258


>Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical protein
            F36H2.1c protein.
          Length = 1071

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -3

Query: 266  LTLNSWHWLMLLEPP*SCGVGE-SIPLCNEMLSAHLVLSAVF 144
            +T+++WHW MLL    S G+   S+ L ++      VLS VF
Sbjct: 996  MTVHTWHWAMLLAQALSLGLYMISLILFDQYFDRQFVLSWVF 1037


>Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical protein
            F36H2.1b protein.
          Length = 1035

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -3

Query: 266  LTLNSWHWLMLLEPP*SCGVGE-SIPLCNEMLSAHLVLSAVF 144
            +T+++WHW MLL    S G+   S+ L ++      VLS VF
Sbjct: 960  MTVHTWHWAMLLAQALSLGLYMISLILFDQYFDRQFVLSWVF 1001


>Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical protein
            F36H2.1a protein.
          Length = 1074

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -3

Query: 266  LTLNSWHWLMLLEPP*SCGVGE-SIPLCNEMLSAHLVLSAVF 144
            +T+++WHW MLL    S G+   S+ L ++      VLS VF
Sbjct: 999  MTVHTWHWAMLLAQALSLGLYMISLILFDQYFDRQFVLSWVF 1040


>AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical
            protein F36H2.1c protein.
          Length = 1071

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -3

Query: 266  LTLNSWHWLMLLEPP*SCGVGE-SIPLCNEMLSAHLVLSAVF 144
            +T+++WHW MLL    S G+   S+ L ++      VLS VF
Sbjct: 996  MTVHTWHWAMLLAQALSLGLYMISLILFDQYFDRQFVLSWVF 1037


>AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical
            protein F36H2.1b protein.
          Length = 1035

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -3

Query: 266  LTLNSWHWLMLLEPP*SCGVGE-SIPLCNEMLSAHLVLSAVF 144
            +T+++WHW MLL    S G+   S+ L ++      VLS VF
Sbjct: 960  MTVHTWHWAMLLAQALSLGLYMISLILFDQYFDRQFVLSWVF 1001


>AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical
            protein F36H2.1a protein.
          Length = 1074

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -3

Query: 266  LTLNSWHWLMLLEPP*SCGVGE-SIPLCNEMLSAHLVLSAVF 144
            +T+++WHW MLL    S G+   S+ L ++      VLS VF
Sbjct: 999  MTVHTWHWAMLLAQALSLGLYMISLILFDQYFDRQFVLSWVF 1040


>AL021171-3|CAB54258.1|  749|Caenorhabditis elegans Hypothetical
           protein H04D03.2b protein.
          Length = 749

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 615 SLYFPRIAKVLPELYANSYVFSSNCGSSD 529
           S++FPR     PE Y   YV  S+C  S+
Sbjct: 285 SIFFPRDRDYPPEFYTEPYVVLSSCSESE 313


>AL021171-2|CAA15957.1|  747|Caenorhabditis elegans Hypothetical
           protein H04D03.2a protein.
          Length = 747

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 615 SLYFPRIAKVLPELYANSYVFSSNCGSSD 529
           S++FPR     PE Y   YV  S+C  S+
Sbjct: 285 SIFFPRDRDYPPEFYTEPYVVLSSCSESE 313


>AF003138-5|AAL77178.1|  488|Caenorhabditis elegans Hypothetical
           protein F12B6.2b protein.
          Length = 488

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 162 GAICSILPCSF*SSFIVTALAKFI 91
           G +C+I  CSF  SF++ AL  ++
Sbjct: 222 GCVCAICACSFAQSFVLVALVTYL 245


>AF003138-4|ABD94108.1|  400|Caenorhabditis elegans Hypothetical
           protein F12B6.2d protein.
          Length = 400

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 162 GAICSILPCSF*SSFIVTALAKFI 91
           G +C+I  CSF  SF++ AL  ++
Sbjct: 264 GCVCAICACSFAQSFVLVALVTYL 287


>AF003138-3|AAM15568.1|  504|Caenorhabditis elegans Hypothetical
           protein F12B6.2c protein.
          Length = 504

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 162 GAICSILPCSF*SSFIVTALAKFI 91
           G +C+I  CSF  SF++ AL  ++
Sbjct: 222 GCVCAICACSFAQSFVLVALVTYL 245


>AF003138-2|AAM15567.1|  546|Caenorhabditis elegans Hypothetical
           protein F12B6.2a protein.
          Length = 546

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 162 GAICSILPCSF*SSFIVTALAKFI 91
           G +C+I  CSF  SF++ AL  ++
Sbjct: 264 GCVCAICACSFAQSFVLVALVTYL 287


>Z66512-9|CAA91328.3|  253|Caenorhabditis elegans Hypothetical
           protein ZK892.5 protein.
          Length = 253

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -1

Query: 190 FAMKCFLLIWCYLQYFALQLLKLF 119
           F  KC LL++  L YFA   LKLF
Sbjct: 84  FTKKCALLVFLTLLYFAAASLKLF 107


>Z48638-12|CAA88573.3|  253|Caenorhabditis elegans Hypothetical
           protein ZK892.5 protein.
          Length = 253

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -1

Query: 190 FAMKCFLLIWCYLQYFALQLLKLF 119
           F  KC LL++  L YFA   LKLF
Sbjct: 84  FTKKCALLVFLTLLYFAAASLKLF 107


>U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical protein
            F02C9.3 protein.
          Length = 1064

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -3

Query: 266  LTLNSWHWLMLLEPP*SCGV-GESIPLCNEMLSAHLVLSAVF 144
            LT+++WHWLML+    S G+   S+   ++      V S VF
Sbjct: 989  LTVHTWHWLMLVAQALSLGLYVVSLITLDQFFDRKFVFSWVF 1030


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,257,643
Number of Sequences: 27780
Number of extensions: 297911
Number of successful extensions: 919
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)