Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_P24
         (769 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69337-1|CAA93269.1|  401|Caenorhabditis elegans ribosomal prote...   256   1e-68
Z69336-1|CAA93268.1|  401|Caenorhabditis elegans ribosomal prote...   256   1e-68
Z66495-15|CAH04728.1|  303|Caenorhabditis elegans Hypothetical p...   256   1e-68
Z66495-14|CAH04729.1|  353|Caenorhabditis elegans Hypothetical p...   256   1e-68
Z66495-12|CAA91277.1|  401|Caenorhabditis elegans Hypothetical p...   256   1e-68
Z49936-8|CAH10798.1|  303|Caenorhabditis elegans Hypothetical pr...   256   1e-68
Z49936-7|CAH10799.1|  353|Caenorhabditis elegans Hypothetical pr...   256   1e-68
Z49936-6|CAA90183.1|  401|Caenorhabditis elegans Hypothetical pr...   256   1e-68
Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical pr...    29   3.6  

>Z69337-1|CAA93269.1|  401|Caenorhabditis elegans ribosomal protein
           L3 protein.
          Length = 401

 Score =  256 bits (628), Expect = 1e-68
 Identities = 118/165 (71%), Positives = 138/165 (83%)
 Frame = -1

Query: 589 WHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 410
           WHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+    +
Sbjct: 235 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTE 294

Query: 409 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 230
           +GK   NN STE+DL++K+ITPMGGFP YG VN D++M++G  +GPKKR+ITLRKSL   
Sbjct: 295 EGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQ 351

Query: 229 TKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
           TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 352 TKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396


>Z69336-1|CAA93268.1|  401|Caenorhabditis elegans ribosomal protein
           L3 protein.
          Length = 401

 Score =  256 bits (628), Expect = 1e-68
 Identities = 118/165 (71%), Positives = 138/165 (83%)
 Frame = -1

Query: 589 WHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 410
           WHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+    +
Sbjct: 235 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTE 294

Query: 409 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 230
           +GK   NN STE+DL++K+ITPMGGFP YG VN D++M++G  +GPKKR+ITLRKSL   
Sbjct: 295 EGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQ 351

Query: 229 TKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
           TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 352 TKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396


>Z66495-15|CAH04728.1|  303|Caenorhabditis elegans Hypothetical
           protein F13B10.2d protein.
          Length = 303

 Score =  256 bits (628), Expect = 1e-68
 Identities = 118/165 (71%), Positives = 138/165 (83%)
 Frame = -1

Query: 589 WHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 410
           WHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+    +
Sbjct: 137 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTE 196

Query: 409 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 230
           +GK   NN STE+DL++K+ITPMGGFP YG VN D++M++G  +GPKKR+ITLRKSL   
Sbjct: 197 EGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQ 253

Query: 229 TKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
           TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 254 TKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298


>Z66495-14|CAH04729.1|  353|Caenorhabditis elegans Hypothetical
           protein F13B10.2c protein.
          Length = 353

 Score =  256 bits (628), Expect = 1e-68
 Identities = 118/165 (71%), Positives = 138/165 (83%)
 Frame = -1

Query: 589 WHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 410
           WHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+    +
Sbjct: 187 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTE 246

Query: 409 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 230
           +GK   NN STE+DL++K+ITPMGGFP YG VN D++M++G  +GPKKR+ITLRKSL   
Sbjct: 247 EGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQ 303

Query: 229 TKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
           TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 304 TKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348


>Z66495-12|CAA91277.1|  401|Caenorhabditis elegans Hypothetical
           protein F13B10.2a protein.
          Length = 401

 Score =  256 bits (628), Expect = 1e-68
 Identities = 118/165 (71%), Positives = 138/165 (83%)
 Frame = -1

Query: 589 WHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 410
           WHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+    +
Sbjct: 235 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTE 294

Query: 409 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 230
           +GK   NN STE+DL++K+ITPMGGFP YG VN D++M++G  +GPKKR+ITLRKSL   
Sbjct: 295 EGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQ 351

Query: 229 TKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
           TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 352 TKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396


>Z49936-8|CAH10798.1|  303|Caenorhabditis elegans Hypothetical
           protein F13B10.2d protein.
          Length = 303

 Score =  256 bits (628), Expect = 1e-68
 Identities = 118/165 (71%), Positives = 138/165 (83%)
 Frame = -1

Query: 589 WHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 410
           WHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+    +
Sbjct: 137 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTE 196

Query: 409 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 230
           +GK   NN STE+DL++K+ITPMGGFP YG VN D++M++G  +GPKKR+ITLRKSL   
Sbjct: 197 EGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQ 253

Query: 229 TKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
           TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 254 TKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298


>Z49936-7|CAH10799.1|  353|Caenorhabditis elegans Hypothetical
           protein F13B10.2c protein.
          Length = 353

 Score =  256 bits (628), Expect = 1e-68
 Identities = 118/165 (71%), Positives = 138/165 (83%)
 Frame = -1

Query: 589 WHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 410
           WHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+    +
Sbjct: 187 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTE 246

Query: 409 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 230
           +GK   NN STE+DL++K+ITPMGGFP YG VN D++M++G  +GPKKR+ITLRKSL   
Sbjct: 247 EGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQ 303

Query: 229 TKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
           TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 304 TKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348


>Z49936-6|CAA90183.1|  401|Caenorhabditis elegans Hypothetical
           protein F13B10.2a protein.
          Length = 401

 Score =  256 bits (628), Expect = 1e-68
 Identities = 118/165 (71%), Positives = 138/165 (83%)
 Frame = -1

Query: 589 WHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 410
           WHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+    +
Sbjct: 235 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTE 294

Query: 409 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 230
           +GK   NN STE+DL++K+ITPMGGFP YG VN D++M++G  +GPKKR+ITLRKSL   
Sbjct: 295 EGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQ 351

Query: 229 TKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
           TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 352 TKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396


>Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical
           protein D2013.8a protein.
          Length = 1087

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
 Frame = +2

Query: 8   FFFALSNVYFHGRHLRLRSSRWGCGSRSFF--ANTILLE---CTH 127
           +F  +  VY+  R +++ +SRWG    S F  A+T+L+    C H
Sbjct: 279 YFVCMIYVYYSSRKIQMVASRWGLAFASSFTVASTLLMTTGICAH 323


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,287,356
Number of Sequences: 27780
Number of extensions: 346618
Number of successful extensions: 868
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)