Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_P23
         (822 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       30   1.9  
08_01_0059 - 394001-394708                                             30   2.6  
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886...    29   4.5  
11_06_0610 - 25449085-25453284                                         29   5.9  
04_04_0675 + 27183826-27184443                                         29   5.9  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 23/94 (24%), Positives = 26/94 (27%), Gaps = 2/94 (2%)
 Frame = -3

Query: 784 PP--EXXNXPRKXXPXXXXGRGXXPPXKPXPXKXXXKXPPPKKSXXPXXXXXXXXXXXXP 611
           PP  E  + P+             PP  P P       PPP K+  P            P
Sbjct: 291 PPGRESPSRPQSIAAAAVASPAPPPPPPPKPAAAAPPPPPPPKAAPP---PPPPKGPPPP 347

Query: 610 XXXXXEPPXXXXKXRXXXSPXXXXGXXPGPXXPP 509
                 PP    K      P    G   GP  PP
Sbjct: 348 PPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPP 381


>08_01_0059 - 394001-394708
          Length = 235

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 17/83 (20%), Positives = 26/83 (31%)
 Frame = -3

Query: 718 PPXKPXPXKXXXKXPPPKKSXXPXXXXXXXXXXXXPXXXXXEPPXXXXKXRXXXSPXXXX 539
           PP +  P       PPP+++  P            P      PP          +P    
Sbjct: 5   PPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPP------SHPLAPPPPH 58

Query: 538 GXXPGPXXPPXDPXPXVXVXSIY 470
              P P  PP  P P + +  ++
Sbjct: 59  ISPPAPVPPPPSPPPHIVIIVVF 81


>03_05_1153 +
           30787574-30787608,30787982-30788089,30788651-30788689,
           30789181-30789184,30789496-30789580,30789609-30790321
          Length = 327

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 19/77 (24%), Positives = 21/77 (27%)
 Frame = -3

Query: 718 PPXKPXPXKXXXKXPPPKKSXXPXXXXXXXXXXXXPXXXXXEPPXXXXKXRXXXSPXXXX 539
           PP  P P       PP K+   P            P     EPP    +      P    
Sbjct: 171 PPPPPPPAPEPEPEPPKKEEPQPPPPKEEEKPEPPPAVIIVEPPAPAPEPE-PEPPKKEP 229

Query: 538 GXXPGPXXPPXDPXPXV 488
              P P   P  P P V
Sbjct: 230 PPPPPPKQEPCPPPPKV 246


>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 16/57 (28%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
 Frame = -1

Query: 816  PPXXXAXPXXAPX-KXXTPXEXTXPXXXXXEGXXPXXSPPPXXXAXKXPPQKKAXXP 649
            PP   + P  AP      P +   P         P  SPPP       PP +K+  P
Sbjct: 1194 PPPVKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPEKSPPP 1250


>04_04_0675 + 27183826-27184443
          Length = 205

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -1

Query: 717 PXXSPPPXXXAXKXPPQKKAXXPXG 643
           P  SPPP   A   PP KK   P G
Sbjct: 111 PPASPPPLPPAPSSPPPKKRRLPDG 135


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,533,865
Number of Sequences: 37544
Number of extensions: 193888
Number of successful extensions: 681
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)