Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_P18
(980 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0490 + 22672241-22674679 27 0.13
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 1.7
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 26 1.7
07_01_0080 + 587674-588510 30 3.2
03_05_0732 - 27232299-27232535,27232717-27232746,27233094-272331... 30 3.2
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 30 3.2
07_03_0890 - 22332768-22333382 29 4.3
04_04_0057 + 22410167-22411330 29 4.3
01_02_0031 + 10364487-10365407 27 5.2
07_03_1382 - 26170563-26170631,26171151-26171843 24 5.3
09_06_0192 - 21450158-21450276,21451084-21451573,21451750-214518... 29 5.7
03_02_0631 + 9969841-9969868,9969965-9970082,9970186-9970828,997... 29 7.5
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 29 7.5
04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544... 28 9.9
03_06_0771 - 36152554-36153215,36153320-36153818,36153924-36153956 28 9.9
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 28 9.9
>01_05_0490 + 22672241-22674679
Length = 812
Score = 26.6 bits (56), Expect(2) = 0.13
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 653 PPPPPPPP 630
PPPPPPPP
Sbjct: 608 PPPPPPPP 615
Score = 26.6 bits (56), Expect(2) = 0.13
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = -1
Query: 650 PPPPPPPXXXXXXXXXXXXXXGDTPKNPPP 561
PPPPPPP P PPP
Sbjct: 641 PPPPPPPTTRRSRKPPQPPSRPAPPPPPPP 670
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 653 PPPPPPPPXXXXXXXXXXXXXXGDTPKNPPP 561
PPPPPPPP P PPP
Sbjct: 544 PPPPPPPPPPPSGNKPAFSPPPPPPPPPPPP 574
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 653 PPPPPPPPXXXXXXXXXXXXXXGDTPKNPPP 561
PPPPPPPP P PPP
Sbjct: 665 PPPPPPPPRSSSRTPTGAATSSKGPPPPPPP 695
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 653 PPPPPPPPXXXXXXXXXXXXXXGDTPKNPPP 561
PPPPPPPP P PPP
Sbjct: 689 PPPPPPPPLPPANRTNGPGVPSAPPPPPPPP 719
Score = 25.8 bits (54), Expect(2) = 1.7
Identities = 11/38 (28%), Positives = 12/38 (31%)
Frame = -1
Query: 647 PPPPPPXXXXXXXXXXXXXXGDTPKNPPPXXGXKKKXG 534
PPPPPP P PPP + G
Sbjct: 689 PPPPPPPPLPPANRTNGPGVPSAPPPPPPPPPANRSNG 726
Score = 23.4 bits (48), Expect(2) = 1.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 653 PPPPPPPP 630
P PPPPPP
Sbjct: 663 PAPPPPPP 670
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 26.2 bits (55), Expect(2) = 1.7
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = -1
Query: 650 PPPPPPPXXXXXXXXXXXXXXGDTPKNPPP 561
PPPPPPP T +PPP
Sbjct: 377 PPPPPPPMSPSCLLPPIIPAPTFTYSSPPP 406
Score = 23.0 bits (47), Expect(2) = 1.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 653 PPPPPPPP 630
PP PPPPP
Sbjct: 374 PPNPPPPP 381
>07_01_0080 + 587674-588510
Length = 278
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 653 PPPPPPPPXXXXXXXXXXXXXXGDTPKNPPP 561
PPPPPPPP P PPP
Sbjct: 91 PPPPPPPPPSSGSPPPPPPPPPPPPPPPPPP 121
>03_05_0732 -
27232299-27232535,27232717-27232746,27233094-27233155,
27233975-27234005,27234618-27234713,27234881-27234969,
27235687-27236263
Length = 373
Score = 29.9 bits (64), Expect = 3.2
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = -1
Query: 653 PPPPPPPPXXXXXXXXXXXXXXGD--TPKNPPPXXG 552
PPPPPPPP + TP PPP G
Sbjct: 54 PPPPPPPPPLPQPQHHHDAVSTDESRTPPPPPPPMG 89
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 653 PPPPPPPPXXXXXXXXXXXXXXGDTPKNPPP 561
PPPPPPPP P PPP
Sbjct: 349 PPPPPPPPPPPPPPPPPKLNTAPKPPPPPPP 379
>07_03_0890 - 22332768-22333382
Length = 204
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -1
Query: 653 PPPPPPPPXXXXXXXXXXXXXXGDTPKNPPP 561
PPPPPPPP DTP PPP
Sbjct: 84 PPPPPPPP-----PPERAVPEAADTPPPPPP 109
>04_04_0057 + 22410167-22411330
Length = 387
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 653 PPPPPPPPXXXXXXXXXXXXXXGDTPKNPPP 561
PPPPPPPP P PPP
Sbjct: 181 PPPPPPPPPAAAAASPSPERSPRCQPSPPPP 211
>01_02_0031 + 10364487-10365407
Length = 306
Score = 26.6 bits (56), Expect(2) = 5.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 653 PPPPPPPP 630
PPPPPPPP
Sbjct: 169 PPPPPPPP 176
Score = 21.0 bits (42), Expect(2) = 5.2
Identities = 9/30 (30%), Positives = 9/30 (30%)
Frame = -1
Query: 650 PPPPPPPXXXXXXXXXXXXXXGDTPKNPPP 561
PPPPP P PPP
Sbjct: 181 PPPPPAPMLPLAPPPTHVTPAMPLSSMPPP 210
>07_03_1382 - 26170563-26170631,26171151-26171843
Length = 253
Score = 23.8 bits (49), Expect(2) = 5.3
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 653 PPPPPPP 633
PPPPPPP
Sbjct: 184 PPPPPPP 190
Score = 23.8 bits (49), Expect(2) = 5.3
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 650 PPPPPPP 630
PPPPPPP
Sbjct: 200 PPPPPPP 206
>09_06_0192 -
21450158-21450276,21451084-21451573,21451750-21451862,
21451992-21452376,21452461-21452529,21453165-21453264,
21454465-21454637,21454737-21454782,21454879-21454954,
21455160-21455196,21455799-21456041
Length = 616
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -1
Query: 731 KKKKKKKKXXXXXXXXXXXXXXFXXXPPPPPPPP 630
+K+KKK + PPPPPPPP
Sbjct: 6 RKRKKKGRPSLLDLQKRTLRLEKLQEPPPPPPPP 39
>03_02_0631 +
9969841-9969868,9969965-9970082,9970186-9970828,
9971146-9971935,9972002-9972051,9972618-9972704
Length = 571
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = -1
Query: 650 PPPPPPPXXXXXXXXXXXXXXGDTPKNPPP 561
PP PPPP D P+ PPP
Sbjct: 42 PPAPPPPRPRRAFGTVRSSNAHDAPEKPPP 71
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 653 PPPPPPPPXXXXXXXXXXXXXXGDTPKNPPP 561
P PPPPPP D P PPP
Sbjct: 117 PRPPPPPPPHPPEDPPPHPPHPPDHPPPPPP 147
>04_04_0137 -
23053148-23053798,23053911-23054146,23054268-23054458,
23054587-23056010
Length = 833
Score = 28.3 bits (60), Expect = 9.9
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 653 PPPPPPPPXXXXXXXXXXXXXXGDTPKNPPP 561
PPPPPPPP P PPP
Sbjct: 367 PPPPPPPPPPPPAVTQQQDVKTSCGPAVPPP 397
>03_06_0771 - 36152554-36153215,36153320-36153818,36153924-36153956
Length = 397
Score = 28.3 bits (60), Expect = 9.9
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 653 PPPPPPPPXXXXXXXXXXXXXXGDTPKNPPP 561
PPPPPPPP D P PPP
Sbjct: 355 PPPPPPPP--PPPPVYYSSYVMLDRPPPPPP 383
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 28.3 bits (60), Expect = 9.9
Identities = 17/63 (26%), Positives = 19/63 (30%)
Frame = -1
Query: 728 KKKKKKKXXXXXXXXXXXXXXFXXXPPPPPPPPXXXXXXXXXXXXXXGDTPKNPPPXXGX 549
KKKK+ + PPPPPPPP PPP
Sbjct: 101 KKKKRHHHHHPPPPPPPHLLHYYGHPPPPPPPPPPFKGDHYGGVYQNWQQNGPPPPPDHV 160
Query: 548 KKK 540
KK
Sbjct: 161 LKK 163
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,212,163
Number of Sequences: 37544
Number of extensions: 122599
Number of successful extensions: 5840
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3395
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2858396560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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