Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_P14
         (755 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       25   2.1  
09_02_0327 - 7284829-7284889,7284946-7286126                           22   4.5  
07_01_0080 + 587674-588510                                             24   6.4  
10_07_0134 + 13289641-13290216,13290435-13290914                       28   9.2  
03_05_0067 - 20460206-20460703,20461255-20461530                       28   9.2  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 25.4 bits (53), Expect(2) = 2.1
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 369 PPPXXXXNPPPXKPXFXKKKG 307
           PPP    +PPP  P   KK G
Sbjct: 356 PPPPKGPSPPPPPPPGGKKGG 376



 Score = 23.0 bits (47), Expect(2) = 2.1
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 504 GXPPPPPP 481
           G PPPPPP
Sbjct: 352 GPPPPPPP 359


>09_02_0327 - 7284829-7284889,7284946-7286126
          Length = 413

 Score = 22.2 bits (45), Expect(3) = 4.5
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = -3

Query: 366 PPXXXXNPPPXKPXFXKKKGG 304
           PP    NPPP  P      GG
Sbjct: 92  PPSDEENPPPNPPSLFDFIGG 112



 Score = 21.8 bits (44), Expect(3) = 4.5
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 510 GXGXPPPPPP 481
           G   PPPPPP
Sbjct: 50  GAHPPPPPPP 59



 Score = 21.4 bits (43), Expect(3) = 4.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 498 PPPPPPXXXKK 466
           PPPPPP   ++
Sbjct: 61  PPPPPPPRGRR 71


>07_01_0080 + 587674-588510
          Length = 278

 Score = 23.8 bits (49), Expect(2) = 6.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 369 PPPXXXXNPPPXKPXFXKK 313
           PPP     PPP  P F ++
Sbjct: 108 PPPPPPPPPPPPPPLFTRR 126



 Score = 23.0 bits (47), Expect(2) = 6.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 504 GXPPPPPP 481
           G PPPPPP
Sbjct: 102 GSPPPPPP 109


>10_07_0134 + 13289641-13290216,13290435-13290914
          Length = 351

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/56 (25%), Positives = 16/56 (28%)
 Frame = -3

Query: 498 PPPPPPXXXKKXXXXXXXFFFFXXXGAXXXXXXXXXPXXXXFXPPPXXXXNPPPXK 331
           PPPPPP   +        F+     G                 P P     PPP K
Sbjct: 249 PPPPPPPANESPVNRGIPFYASIGRGGAGGVDIDQLLLRGGHSPSPAAVTTPPPPK 304


>03_05_0067 - 20460206-20460703,20461255-20461530
          Length = 257

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/52 (26%), Positives = 16/52 (30%)
 Frame = -1

Query: 491 PPPPXXXKKXXXPXXXFFFXXXXGPPPXFFFLXXXXXXXXXPPXXXXKTPPP 336
           PPPP        P   +F      PPP +F            P      PPP
Sbjct: 4   PPPPPQWAMGPPPPPQYFQAGPPPPPPQYFQGAHPPAAMWGQPPPPQAAPPP 55


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,926,556
Number of Sequences: 37544
Number of extensions: 422656
Number of successful extensions: 5744
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5156
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)