Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_P04
(774 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39850-9|AAM45371.1| 440|Caenorhabditis elegans Polyq (poly glu... 73 2e-13
U39850-8|AAM45369.1| 558|Caenorhabditis elegans Polyq (poly glu... 73 2e-13
U39850-7|AAM45370.1| 573|Caenorhabditis elegans Polyq (poly glu... 73 2e-13
U39850-5|AAM45368.1| 670|Caenorhabditis elegans Polyq (poly glu... 73 2e-13
U39850-4|ABB51184.1| 672|Caenorhabditis elegans Polyq (poly glu... 73 2e-13
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 73 2e-13
AF016430-4|AAB65372.1| 594|Caenorhabditis elegans Hypothetical ... 71 9e-13
AL132860-27|CAB60521.1| 365|Caenorhabditis elegans Hypothetical... 69 3e-12
AC006620-4|AAF39778.1| 305|Caenorhabditis elegans Hypothetical ... 69 3e-12
AL023828-14|CAA19458.1| 269|Caenorhabditis elegans Hypothetical... 57 2e-08
U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical pr... 33 0.17
AF038604-4|AAO38680.1| 134|Caenorhabditis elegans Hypothetical ... 29 2.8
AF038604-3|AAB92012.1| 161|Caenorhabditis elegans Hypothetical ... 29 2.8
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical... 29 3.7
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 29 3.7
U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical pr... 28 6.4
U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical pr... 28 6.4
U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical pr... 28 6.4
>U39850-9|AAM45371.1| 440|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform f
protein.
Length = 440
Score = 72.9 bits (171), Expect = 2e-13
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = -1
Query: 654 VKPSSPVVDHNTRFSGIXPRDLARATKTXRDVQNDILGFVGTDTILIGHALENDLRALKL 475
VKP + V+D NT FSG+ + A T + + +V DTILIGH+LE+DL+A+++
Sbjct: 305 VKPPTDVLDPNTEFSGLTMEQINSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRV 364
Query: 474 LHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXRT-VQRGSNGHSPLEDARAAMDLVLLK 298
+H V+DT L+ R + + GH +EDA +DL+
Sbjct: 365 VHKNVIDTAILFRSTRDTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDLIFYG 424
Query: 297 VQQEQA 280
++ ++
Sbjct: 425 LRNPES 430
>U39850-8|AAM45369.1| 558|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform d
protein.
Length = 558
Score = 72.9 bits (171), Expect = 2e-13
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = -1
Query: 654 VKPSSPVVDHNTRFSGIXPRDLARATKTXRDVQNDILGFVGTDTILIGHALENDLRALKL 475
VKP + V+D NT FSG+ + A T + + +V DTILIGH+LE+DL+A+++
Sbjct: 423 VKPPTDVLDPNTEFSGLTMEQINSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRV 482
Query: 474 LHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXRT-VQRGSNGHSPLEDARAAMDLVLLK 298
+H V+DT L+ R + + GH +EDA +DL+
Sbjct: 483 VHKNVIDTAILFRSTRDTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDLIFYG 542
Query: 297 VQQEQA 280
++ ++
Sbjct: 543 LRNPES 548
>U39850-7|AAM45370.1| 573|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform e
protein.
Length = 573
Score = 72.9 bits (171), Expect = 2e-13
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = -1
Query: 654 VKPSSPVVDHNTRFSGIXPRDLARATKTXRDVQNDILGFVGTDTILIGHALENDLRALKL 475
VKP + V+D NT FSG+ + A T + + +V DTILIGH+LE+DL+A+++
Sbjct: 438 VKPPTDVLDPNTEFSGLTMEQINSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRV 497
Query: 474 LHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXRT-VQRGSNGHSPLEDARAAMDLVLLK 298
+H V+DT L+ R + + GH +EDA +DL+
Sbjct: 498 VHKNVIDTAILFRSTRDTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDLIFYG 557
Query: 297 VQQEQA 280
++ ++
Sbjct: 558 LRNPES 563
>U39850-5|AAM45368.1| 670|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform c
protein.
Length = 670
Score = 72.9 bits (171), Expect = 2e-13
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = -1
Query: 654 VKPSSPVVDHNTRFSGIXPRDLARATKTXRDVQNDILGFVGTDTILIGHALENDLRALKL 475
VKP + V+D NT FSG+ + A T + + +V DTILIGH+LE+DL+A+++
Sbjct: 535 VKPPTDVLDPNTEFSGLTMEQINSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRV 594
Query: 474 LHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXRT-VQRGSNGHSPLEDARAAMDLVLLK 298
+H V+DT L+ R + + GH +EDA +DL+
Sbjct: 595 VHKNVIDTAILFRSTRDTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDLIFYG 654
Query: 297 VQQEQA 280
++ ++
Sbjct: 655 LRNPES 660
>U39850-4|ABB51184.1| 672|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform g
protein.
Length = 672
Score = 72.9 bits (171), Expect = 2e-13
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = -1
Query: 654 VKPSSPVVDHNTRFSGIXPRDLARATKTXRDVQNDILGFVGTDTILIGHALENDLRALKL 475
VKP + V+D NT FSG+ + A T + + +V DTILIGH+LE+DL+A+++
Sbjct: 537 VKPPTDVLDPNTEFSGLTMEQINSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRV 596
Query: 474 LHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXRT-VQRGSNGHSPLEDARAAMDLVLLK 298
+H V+DT L+ R + + GH +EDA +DL+
Sbjct: 597 VHKNVIDTAILFRSTRDTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDLIFYG 656
Query: 297 VQQEQA 280
++ ++
Sbjct: 657 LRNPES 662
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 72.9 bits (171), Expect = 2e-13
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = -1
Query: 654 VKPSSPVVDHNTRFSGIXPRDLARATKTXRDVQNDILGFVGTDTILIGHALENDLRALKL 475
VKP + V+D NT FSG+ + A T + + +V DTILIGH+LE+DL+A+++
Sbjct: 1512 VKPPTDVLDPNTEFSGLTMEQINSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRV 1571
Query: 474 LHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXRT-VQRGSNGHSPLEDARAAMDLVLLK 298
+H V+DT L+ R + + GH +EDA +DL+
Sbjct: 1572 VHKNVIDTAILFRSTRDTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDLIFYG 1631
Query: 297 VQQEQA 280
++ ++
Sbjct: 1632 LRNPES 1637
>AF016430-4|AAB65372.1| 594|Caenorhabditis elegans Hypothetical
protein C05C8.5 protein.
Length = 594
Score = 70.9 bits (166), Expect = 9e-13
Identities = 43/140 (30%), Positives = 65/140 (46%)
Frame = -1
Query: 708 LXSIXVIAADGRLVYRSLVKPSSPVVDHNTRFSGIXPRDLARATKTXRDVQNDILGFVGT 529
L I ++ + +LVKP + D+ TR+SGI P + T T DVQ I +
Sbjct: 238 LTRISIVDEFENTILDTLVKPEGRITDYVTRWSGITPDMMEGVTTTLGDVQKAIQSLLPP 297
Query: 528 DTILIGHALENDLRALKLLHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXRTVQRGSNG 349
D IL+GH+LE+DL+A+K+ H +D + + + G
Sbjct: 298 DAILVGHSLEHDLQAMKMTHPFCLDVGHVLNYTNSNTEFRNSLKNLTELFLGAQIQSEFG 357
Query: 348 HSPLEDARAAMDLVLLKVQQ 289
H EDA AAM L LK+++
Sbjct: 358 HCSYEDAWAAMRLAQLKLEK 377
>AL132860-27|CAB60521.1| 365|Caenorhabditis elegans Hypothetical
protein Y56A3A.33 protein.
Length = 365
Score = 69.3 bits (162), Expect = 3e-12
Identities = 35/134 (26%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Frame = -1
Query: 699 IXVIAADGRLVYRSLVKPSSPVVDHNTRFSGIXPRDLARATKTXRDVQNDILGFVGTDTI 520
+ ++ G+++ + P V+ N+ FSG+ +D+ A + + + + ++T+
Sbjct: 200 VSLVDMKGKVLLDTFALPVFEVISFNSTFSGVTEKDMESAI-SLEACRLQLFQLINSETL 258
Query: 519 LIGHALENDLRALKLLHSAVVDTCALY---PHARGFPMXXXXXXXXXXXXXRTVQRGSNG 349
L+GH+LE+DL+AL+L+H V+DT L+ +R + + + VQ ++G
Sbjct: 259 LVGHSLESDLKALRLVHHNVIDTAVLFSIVDPSRSYILKLSLQNLAKKYLCKDVQSEASG 318
Query: 348 HSPLEDARAAMDLV 307
HS +ED+ M+L+
Sbjct: 319 HSSIEDSHTCMELL 332
>AC006620-4|AAF39778.1| 305|Caenorhabditis elegans Hypothetical
protein C51G7.1 protein.
Length = 305
Score = 69.3 bits (162), Expect = 3e-12
Identities = 35/134 (26%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Frame = -1
Query: 699 IXVIAADGRLVYRSLVKPSSPVVDHNTRFSGIXPRDLARATKTXRDVQNDILGFVGTDTI 520
+ ++ G+++ + P V+ N+ FSG+ +D+ A + + + + ++T+
Sbjct: 163 VSLVDMKGKVLLDTFALPVFEVISFNSTFSGVTEKDMESAI-SLEACRLQLFQLINSETL 221
Query: 519 LIGHALENDLRALKLLHSAVVDTCALY---PHARGFPMXXXXXXXXXXXXXRTVQRGSNG 349
L+GH+LE+DL+AL+L+H V+DT L+ +R + + + VQ ++G
Sbjct: 222 LVGHSLESDLKALRLVHHNVIDTAVLFSIVDPSRSYILKLSLQNLAKKYLCKDVQSEASG 281
Query: 348 HSPLEDARAAMDLV 307
HS +ED+ M+L+
Sbjct: 282 HSSIEDSHTCMELL 295
>AL023828-14|CAA19458.1| 269|Caenorhabditis elegans Hypothetical
protein Y17G7B.12 protein.
Length = 269
Score = 56.8 bits (131), Expect = 2e-08
Identities = 42/137 (30%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Frame = -1
Query: 708 LXSIXVIAADGRLVYRSLVKPSSPVVDHNTRFSGIXPRDLARATKTXRDVQNDILGFVGT 529
L I ++ G++VY VKP+ V D T SGI P ++ +A R Q ++ +
Sbjct: 121 LARISIVNELGKIVYDKFVKPTEKVTDFRTAVSGIRPENMIKAIPFDR-AQTEVSKLI-D 178
Query: 528 DTILIGHALENDLRALKLLH--SAVVDT--CALYPHARGFPMXXXXXXXXXXXXXRTVQR 361
I+IGHA+ ND R LKL H DT C + + +QR
Sbjct: 179 GRIVIGHAVHNDFRVLKLNHIRKLTRDTAKCTILKNMANHHGTPSLKKLAKEVLGIEIQR 238
Query: 360 GSNGHSPLEDARAAMDL 310
G H + DAR A+ L
Sbjct: 239 GE--HDSITDARVALRL 253
>U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical protein
F31E3.4 protein.
Length = 1131
Score = 33.5 bits (73), Expect = 0.17
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Frame = -1
Query: 675 RLVYRSLVKPSSPV--VDHNTRFSGIXPRDLARATK-----TXRDVQNDILGFVGTDTIL 517
R+++ VK + V VD+ T+FSGI DL T T + + + +
Sbjct: 947 RIIFDDHVKLTDDVEVVDYLTKFSGIVKADLCPTTSEKYLTTHKRLLLRMHVLIQRGVTF 1006
Query: 516 IGHALENDLRALK--LLHSAVVDTCAL 442
+GHAL ND L + S ++DT L
Sbjct: 1007 VGHALHNDFTVLNVHVAESQIIDTVTL 1033
>AF038604-4|AAO38680.1| 134|Caenorhabditis elegans Hypothetical
protein B0546.4b protein.
Length = 134
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = -3
Query: 478 VIAQRSCRYMCFISTRTRIPNAPITTRPIRGASGPYCTKRQQWSLAIGRC 329
+ R Y C + + +T++ G++GP ++ W++ GRC
Sbjct: 8 ICGARGSLYGCVVCNTYLTCSKELTSKAFTGSTGPATLFKRAWNVVYGRC 57
>AF038604-3|AAB92012.1| 161|Caenorhabditis elegans Hypothetical
protein B0546.4a protein.
Length = 161
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = -3
Query: 478 VIAQRSCRYMCFISTRTRIPNAPITTRPIRGASGPYCTKRQQWSLAIGRC 329
+ R Y C + + +T++ G++GP ++ W++ GRC
Sbjct: 8 ICGARGSLYGCVVCNTYLTCSKELTSKAFTGSTGPATLFKRAWNVVYGRC 57
>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
protein Y43F8B.3b protein.
Length = 1398
Score = 29.1 bits (62), Expect = 3.7
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Frame = -3
Query: 439 STRTRIPNAPITTRPIRGASGPYCTKRQQWSLAIGRC-----SSCYG-------FGAT*S 296
S+R++ P+ T P + +GPY R ++ GRC S C G F S
Sbjct: 65 SSRSQPPSGQSCTLPRQIGTGPYRIPRWYYNPVRGRCELFYWSGCCGNGNNFQTFQTCQS 124
Query: 295 TAGASEQSTQHIISTAYFAT 236
T AS Q+T S F+T
Sbjct: 125 TCEASSQTTSQTSSQIVFST 144
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 29.1 bits (62), Expect = 3.7
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Frame = -3
Query: 439 STRTRIPNAPITTRPIRGASGPYCTKRQQWSLAIGRC-----SSCYG-------FGAT*S 296
S+R++ P+ T P + +GPY R ++ GRC S C G F S
Sbjct: 65 SSRSQPPSGQSCTLPRQIGTGPYRIPRWYYNPVRGRCELFYWSGCCGNGNNFQTFQTCQS 124
Query: 295 TAGASEQSTQHIISTAYFAT 236
T AS Q+T S F+T
Sbjct: 125 TCEASSQTTSQTSSQIVFST 144
>U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical
protein R57.1b protein.
Length = 576
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -1
Query: 543 GFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPHARGF 421
G D + I H ND + LKL+ + AL + GF
Sbjct: 157 GSASADVVYINHGTANDFKNLKLMGVDIKGKIALMRYGHGF 197
>U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical
protein R57.1c protein.
Length = 751
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -1
Query: 543 GFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPHARGF 421
G D + I H ND + LKL+ + AL + GF
Sbjct: 157 GSASADVVYINHGTANDFKNLKLMGVDIKGKIALMRYGHGF 197
>U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical
protein R57.1a protein.
Length = 770
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -1
Query: 543 GFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPHARGF 421
G D + I H ND + LKL+ + AL + GF
Sbjct: 176 GSASADVVYINHGTANDFKNLKLMGVDIKGKIALMRYGHGF 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,508,358
Number of Sequences: 27780
Number of extensions: 322241
Number of successful extensions: 678
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -