Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_O17
         (737 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0157 - 28079181-28079720                                         30   1.7  
07_03_1638 + 28299063-28299625,28301055-28301100,28301596-28301637     29   5.1  
03_03_0028 + 13893813-13893959,13894961-13895264,13896557-138967...    28   6.7  
10_01_0162 + 1820761-1821855                                           28   8.9  
09_04_0115 - 14789499-14790288,14792055-14792441,14792820-14793193     28   8.9  
08_02_0707 - 20212190-20214592                                         28   8.9  
02_02_0100 - 6783821-6784339,6784815-6784984,6785062-6785164,678...    28   8.9  

>05_07_0157 - 28079181-28079720
          Length = 179

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 20/56 (35%), Positives = 26/56 (46%)
 Frame = +2

Query: 113 RGAVHGGRDRQTVHAAEFACDPIVVEQGPVGGHADGASPWRELPQEVVPELDGVAR 280
           RG V   ++R  V AA FA   +V   G  GG  DGA   +     V+ E+   AR
Sbjct: 69  RGLVDHLQERLGVSAAAFAPAAVVAAPGAAGGGEDGAPAEKTEFDVVIEEVPSSAR 124


>07_03_1638 + 28299063-28299625,28301055-28301100,28301596-28301637
          Length = 216

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +2

Query: 17  LNASLCIYVGQAMVKLFLSVFILXLELVGPPVRGAVHGGRDRQTVHAAE 163
           L+ +   Y  +A+V+   +V    L  VG P+    HGG    TVHA +
Sbjct: 47  LHKNRVYYASEALVRRATAVARPRLAGVGTPIGKFTHGGAFHLTVHALD 95


>03_03_0028 +
           13893813-13893959,13894961-13895264,13896557-13896761,
           13897428-13897646,13897734-13897869,13899130-13899387,
           13899402-13899686
          Length = 517

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = +2

Query: 62  LFLSVFILXLELVGPPVRGAVHGGRDRQTVHAAEFAC--DPIVVEQGPVGGHADGASPWR 235
           L++S     +  + P V   VH G    T  A E+AC    +++  G VG   +  + W+
Sbjct: 364 LYVSSISSGIPALAPAVLMGVHDGDGVATKEALEWACAIPDLLLASGEVGRLLNDIAAWK 423

Query: 236 E 238
           E
Sbjct: 424 E 424


>10_01_0162 + 1820761-1821855
          Length = 364

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 94  ARRSTGARCGPRWTGPSDSSCRRI 165
           ARR  GAR    W+  +D  CRR+
Sbjct: 144 ARRERGARLAALWSALADRLCRRV 167


>09_04_0115 - 14789499-14790288,14792055-14792441,14792820-14793193
          Length = 516

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 228 GLAPSACPPTGPCSTTIGSHA 166
           G +P+A PPTGP S+   S A
Sbjct: 52  GASPAAAPPTGPASSPAASPA 72


>08_02_0707 - 20212190-20214592
          Length = 800

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -1

Query: 419 LSVPECIXLFALGGRQGGDGAAYDGSQDAPL 327
           LSVP  + LF +GG   GDG   DG    P+
Sbjct: 226 LSVPAVLGLFFVGGSDAGDGDG-DGGAVLPI 255


>02_02_0100 -
           6783821-6784339,6784815-6784984,6785062-6785164,
           6785291-6785454,6786781-6786821,6786933-6787129
          Length = 397

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 16/25 (64%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
 Frame = -1

Query: 383 GGRQGGDGAAY-DGSQD---APLGD 321
           GGR GGDG AY D S D   AP GD
Sbjct: 39  GGRDGGDGGAYGDASGDDGRAPGGD 63


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,185,871
Number of Sequences: 37544
Number of extensions: 322035
Number of successful extensions: 1121
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)