Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_O15
         (761 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a...    31   0.68 
AF025460-2|AAF02169.3|  545|Caenorhabditis elegans Prion-like-(q...    30   2.1  
U32305-18|AAK18852.2|  719|Caenorhabditis elegans Hypothetical p...    29   2.7  
AF100656-3|AAF99968.1|  265|Caenorhabditis elegans Hypothetical ...    29   3.6  
AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical ...    28   6.3  
Z81593-10|CAI94504.1|  349|Caenorhabditis elegans Hypothetical p...    28   8.3  
Z27081-3|CAH19085.1|  869|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z27081-2|CAA81607.2|  937|Caenorhabditis elegans Hypothetical pr...    28   8.3  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    28   8.3  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    28   8.3  

>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 192 protein.
          Length = 2957

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 17/78 (21%), Positives = 34/78 (43%)
 Frame = -2

Query: 529 PSSLGMAKGVSPPYFQVNDESQASRFISGHSTHTPLPSSNSPPH*RGRHGHKPSHHRL*S 350
           P+ + M  GV PP++  ++      +  G  T+ P P    PP  +    ++  +H+  +
Sbjct: 122 PNQMAMYGGVPPPHYPSSNGPSQQGYRPGPVTNGPPPQGQYPPPPQAPQNYQQMYHQQRA 181

Query: 349 QNRR**FSNS*GTGPQGF 296
           Q ++         GP G+
Sbjct: 182 QQQQ--AGQQQAQGPPGY 197


>AF025460-2|AAF02169.3|  545|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 41
           protein.
          Length = 545

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -2

Query: 559 SSEAPSAYLTPSSLGMAKGVSPPYFQVNDESQA-SRFISGHSTHTPLPSSNSPP 401
           SS A S+  TPSS    K  SPP+ Q +    A  R ++  S H P P ++S P
Sbjct: 51  SSAASSSTSTPSSSSHHKKSSPPHHQKSAAPSAPPRDVT--SAHAPPPPASSAP 102


>U32305-18|AAK18852.2|  719|Caenorhabditis elegans Hypothetical
           protein B0336.3 protein.
          Length = 719

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 23/81 (28%), Positives = 36/81 (44%)
 Frame = -2

Query: 697 LXFRVHQPXSSIPGFXTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSL 518
           L  + + P S+ P   + T PDL         P      PG++   SS +PSA     S 
Sbjct: 73  LTSKSYMPASTAPTSASATAPDLKKEKAPAEKPSKPTAPPGVQK--SSSSPSA-SKAESR 129

Query: 517 GMAKGVSPPYFQVNDESQASR 455
            + K +SPP  +  ++ + SR
Sbjct: 130 PLRKRISPPPSENREKEKQSR 150


>AF100656-3|AAF99968.1|  265|Caenorhabditis elegans Hypothetical
           protein F49F1.1 protein.
          Length = 265

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 11/43 (25%), Positives = 24/43 (55%)
 Frame = -2

Query: 670 SSIPGFXTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPS 542
           + +P   T  TP+LT++++ P+T   K     + P  +++ P+
Sbjct: 171 TGVPLVLTTLTPELTTVTVEPITSTLKPTTTTITPTTTTKLPT 213


>AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical
           protein W03G1.5 protein.
          Length = 471

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 11/18 (61%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
 Frame = -2

Query: 412 NSPPH*RGRHGHK-PSHH 362
           + PPH  GRHGH  P HH
Sbjct: 385 HGPPHCPGRHGHHGPPHH 402


>Z81593-10|CAI94504.1|  349|Caenorhabditis elegans Hypothetical
           protein T20B3.15 protein.
          Length = 349

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = -3

Query: 270 VFDPSCYFSTPPFDTVLYDNIRTVLKDKKTALLSASIQASLPSSEIYRQLVDPRHV-SSD 94
           ++D +C F+   +  + YD I T  + +    LS S  AS+ S    R L+    V S  
Sbjct: 235 IYDETCVFNYDNYCYIPYDQINTSKQGQSICELSGSNLASIRSGNENRFLMSTVSVFSIF 294

Query: 93  SFGVYVKS*SLIL 55
           + G +  S  LIL
Sbjct: 295 AIGGFAFSDDLIL 307


>Z27081-3|CAH19085.1|  869|Caenorhabditis elegans Hypothetical
           protein M01A8.2b protein.
          Length = 869

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = -2

Query: 580 PGLKPPLSSEA-PSAYLTPSSLGMAKGVSPPYFQVNDESQASRFISGHSTHTPLPSSNSP 404
           P + PP ++E  P     PS+   +KG  P       + Q  R  S  ST T      +P
Sbjct: 409 PVVSPPTTAEKKPVVSSIPSTSSASKGPFPTSSFAGGKLQGPRKTSSSSTTTSAKKQKNP 468

Query: 403 P 401
           P
Sbjct: 469 P 469


>Z27081-2|CAA81607.2|  937|Caenorhabditis elegans Hypothetical
           protein M01A8.2a protein.
          Length = 937

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = -2

Query: 580 PGLKPPLSSEA-PSAYLTPSSLGMAKGVSPPYFQVNDESQASRFISGHSTHTPLPSSNSP 404
           P + PP ++E  P     PS+   +KG  P       + Q  R  S  ST T      +P
Sbjct: 477 PVVSPPTTAEKKPVVSSIPSTSSASKGPFPTSSFAGGKLQGPRKTSSSSTTTSAKKQKNP 536

Query: 403 P 401
           P
Sbjct: 537 P 537


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18b protein.
          Length = 1459

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 565  PLSSEAPSAYLTPSSLGMAKGVSPP 491
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18a protein.
          Length = 1456

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 565  PLSSEAPSAYLTPSSLGMAKGVSPP 491
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,505,931
Number of Sequences: 27780
Number of extensions: 317277
Number of successful extensions: 995
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)