Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_O06
         (781 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    29   5.4  
AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p pro...    29   5.4  
AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA...    29   5.4  
AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB...    29   5.4  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    29   5.4  
AY089614-1|AAL90352.1|  417|Drosophila melanogaster RE28792p pro...    29   9.5  
AY060989-1|AAL28537.1|  222|Drosophila melanogaster GM14833p pro...    29   9.5  
AE014297-2366|AAF55430.3|  787|Drosophila melanogaster CG5836-PA...    29   9.5  

>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 20/79 (25%), Positives = 21/79 (26%)
 Frame = +1

Query: 541 RPPXXXXPXAPXXQXXXXAXXXXXPGXXLXQXPLXHXPXPXFXPXXGPAXXPXXXXPXXX 720
           RPP    P AP             P       P    P P + P   P   P    P   
Sbjct: 153 RPPPQPTPSAPAPSYGPPQPQPPAPQPPSPPSP---QPGPEYLPPDQPKPRPTPSRPQPP 209

Query: 721 PXPXPXXXFXXXVXXPPXP 777
           P P P          PP P
Sbjct: 210 PPPPPRPQPTPGYGPPPPP 228


>AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p
           protein.
          Length = 1458

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 238 HAPHHALCSHDHSGSGVRSQVLERLEM 318
           H PHH    H H+G+G   Q  E+L++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQL 689


>AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA,
           isoform A protein.
          Length = 1458

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 238 HAPHHALCSHDHSGSGVRSQVLERLEM 318
           H PHH    H H+G+G   Q  E+L++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQL 689


>AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB,
            isoform B protein.
          Length = 1740

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 238  HAPHHALCSHDHSGSGVRSQVLERLEM 318
            H PHH    H H+G+G   Q  E+L++
Sbjct: 945  HHPHHHPLQHPHAGAGDPRQTQEQLQL 971


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 20/79 (25%), Positives = 21/79 (26%)
 Frame = +1

Query: 541 RPPXXXXPXAPXXQXXXXAXXXXXPGXXLXQXPLXHXPXPXFXPXXGPAXXPXXXXPXXX 720
           RPP    P AP             P       P    P P + P   P   P    P   
Sbjct: 153 RPPPQPTPSAPAPSYGPPQPQPPAPQPPSPPSP---QPGPEYLPPDQPKPRPTPSRPQPP 209

Query: 721 PXPXPXXXFXXXVXXPPXP 777
           P P P          PP P
Sbjct: 210 PPPPPRPQPTPGYGPPPPP 228


>AY089614-1|AAL90352.1|  417|Drosophila melanogaster RE28792p
           protein.
          Length = 417

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 19/62 (30%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
 Frame = +3

Query: 597 PPXXVPGAXSX--PXXPXXXAXPXFPXXXGSXXGXXXXXXXPXPXPPAPXXXXXXXXXPP 770
           PP  +PG      P  P   A P  P   G+  G       P P P AP         PP
Sbjct: 353 PP--IPGTLPPLIPPPPGTSAPPMPPWGGGAYSGWGGGYAPPPPPPCAPPPPALSLSQPP 410

Query: 771 XP 776
            P
Sbjct: 411 PP 412


>AY060989-1|AAL28537.1|  222|Drosophila melanogaster GM14833p
           protein.
          Length = 222

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 19/62 (30%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
 Frame = +3

Query: 597 PPXXVPGAXSX--PXXPXXXAXPXFPXXXGSXXGXXXXXXXPXPXPPAPXXXXXXXXXPP 770
           PP  +PG      P  P   A P  P   G+  G       P P P AP         PP
Sbjct: 158 PP--IPGTLPPLIPPPPGTSAPPMPPWGGGAYSGWGGGYAPPPPPPCAPPPPALSLSQPP 215

Query: 771 XP 776
            P
Sbjct: 216 PP 217


>AE014297-2366|AAF55430.3|  787|Drosophila melanogaster CG5836-PA
           protein.
          Length = 787

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 19/62 (30%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
 Frame = +3

Query: 597 PPXXVPGAXSX--PXXPXXXAXPXFPXXXGSXXGXXXXXXXPXPXPPAPXXXXXXXXXPP 770
           PP  +PG      P  P   A P  P   G+  G       P P P AP         PP
Sbjct: 723 PP--IPGTLPPLIPPPPGTSAPPMPPWGGGAYSGWGGGYAPPPPPPCAPPPPALSLSQPP 780

Query: 771 XP 776
            P
Sbjct: 781 PP 782


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,758,456
Number of Sequences: 53049
Number of extensions: 278309
Number of successful extensions: 907
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)