Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_N23
         (748 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0648 - 30844289-30844341,30844536-30844648,30845435-308454...    33   0.32 
01_01_0908 + 7158172-7158356,7159436-7159866,7159953-7161061,716...    32   0.56 
03_01_0260 - 1999462-1999488,1999748-1999930,2000940-2001146,200...    29   5.2  
11_01_0017 - 129261-129335,129352-129426,129565-129645,129929-13...    28   6.9  
01_06_1410 + 37116414-37116695,37116796-37116902,37117148-371176...    28   9.1  

>01_06_0648 -
           30844289-30844341,30844536-30844648,30845435-30845484,
           30845572-30845642,30845725-30845797,30846744-30846841,
           30846936-30847002,30847150-30847230,30847312-30847479,
           30847563-30847730,30847813-30848109,30848205-30848426,
           30849287-30849325
          Length = 499

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 18/83 (21%), Positives = 38/83 (45%)
 Frame = -1

Query: 364 LSADAIKAXKNQLKTQVLNEADTGSSLAESLAAQGLYTGSVRSAVDIAKDIDQISNNDIS 185
           ++ + +   K   K+ VL   ++    +E +  Q L  G  +      KD++ I+ NDIS
Sbjct: 405 VTQEQLDRAKQATKSAVLMNLESRVVASEDIGRQILTYGERKPIEHFLKDLEAITLNDIS 464

Query: 184 QAVSNAAKNKISIGAVGNLAFVP 116
                   + +++ + G++  VP
Sbjct: 465 STAKKIISSPLTLASWGDVIHVP 487


>01_01_0908 +
           7158172-7158356,7159436-7159866,7159953-7161061,
           7161372-7162820
          Length = 1057

 Score = 31.9 bits (69), Expect = 0.56
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = -1

Query: 367 SLSADAIKAXKNQLKTQVLNEADTGSSLAESLAAQGLYTGSVRSAVDIAKDIDQISNNDI 188
           ++  D +K+ KN+ K +  +  D GSSL   L  +   TGSV   V  A     +SN  +
Sbjct: 423 TVGEDGLKSSKNKTKRKYSDVVDDGSSLMNWLNGKKKRTGSVHHTV--AHPAGNLSNKKV 480

Query: 187 SQAVS 173
           +   S
Sbjct: 481 TPTAS 485


>03_01_0260 -
           1999462-1999488,1999748-1999930,2000940-2001146,
           2001895-2002359
          Length = 293

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
 Frame = -1

Query: 481 QRPDSTLATATMDCSALFYLYLKTKLSRRK--SCS*GLKTSLSADAIKAXKNQLKTQVLN 308
           +RPD   ATA     A  Y +L+ +  RR+  +   G + + +  A    K +     L 
Sbjct: 45  KRPDDPNATADFQRLASSYNFLRDESLRRQFDARLRGRREAAARAAASGVKRRKAVSDLE 104

Query: 307 EADTGSSLAESL-AAQGLYTGSVRSAVDIAKDIDQ 206
           E +  +S  +++ AA+       R A D+ +++++
Sbjct: 105 ERERAASTGQAVDAAEAARREDKRKAADVKRELEE 139


>11_01_0017 -
           129261-129335,129352-129426,129565-129645,129929-130040,
           130131-131177,131256-131347,131773-131943,132150-132253,
           132367-132501,132583-132724,132803-133059,133126-133337,
           133417-133454
          Length = 846

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 512 AKAIGXIXPXAAAGFNVSYSDNGLFGVVL 426
           AKA+    P   AG+   Y D+G+ G VL
Sbjct: 177 AKAVQKSIPRPPAGYKYPYGDSGIIGYVL 205


>01_06_1410 +
           37116414-37116695,37116796-37116902,37117148-37117649,
           37118211-37118326,37119007-37119211
          Length = 403

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 216 SLAMSTAERTEPVYKPCAANDSASDDPVSASFNTCVFN 329
           SLA +  ++ +P    C+AN + SD  + A    C FN
Sbjct: 206 SLASNICDQLDPASPKCSANSTMSDLVLPARDIICAFN 243


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,558,963
Number of Sequences: 37544
Number of extensions: 277361
Number of successful extensions: 584
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)