Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_N23
         (748 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

J04973-1|AAA35710.1|  453|Homo sapiens protein ( Human cytochrom...    56   1e-07
BC003136-1|AAH03136.1|  453|Homo sapiens ubiquinol-cytochrome c ...    56   1e-07
BC000484-1|AAH00484.1|  453|Homo sapiens UQCRC2 protein protein.       56   1e-07

>J04973-1|AAA35710.1|  453|Homo sapiens protein ( Human cytochrome
           bc-1 complex core protein II mRNA, complete cds. ).
          Length = 453

 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 28/89 (31%), Positives = 44/89 (49%)
 Frame = -1

Query: 367 SLSADAIKAXKNQLKTQVLNEADTGSSLAESLAAQGLYTGSVRSAVDIAKDIDQISNNDI 188
           +LS   ++A KN+LK   L   ++     E + +Q L  GS      + + ID ++N DI
Sbjct: 365 NLSNTDVQAAKNKLKAGYLMSVESSECFLEEVGSQALVAGSYMPPSTVLQQIDSVANADI 424

Query: 187 SQAVSNAAKNKISIGAVGNLAFVPYIDEL 101
             A       + S+ A GNL   P++DEL
Sbjct: 425 INAAKKFVSGQKSMAASGNLGHTPFVDEL 453


>BC003136-1|AAH03136.1|  453|Homo sapiens ubiquinol-cytochrome c
           reductase core protein II protein.
          Length = 453

 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 28/89 (31%), Positives = 44/89 (49%)
 Frame = -1

Query: 367 SLSADAIKAXKNQLKTQVLNEADTGSSLAESLAAQGLYTGSVRSAVDIAKDIDQISNNDI 188
           +LS   ++A KN+LK   L   ++     E + +Q L  GS      + + ID ++N DI
Sbjct: 365 NLSNTDVQAAKNKLKAGYLMSVESSECFLEEVGSQALVAGSYMPPSTVLQQIDSVANADI 424

Query: 187 SQAVSNAAKNKISIGAVGNLAFVPYIDEL 101
             A       + S+ A GNL   P++DEL
Sbjct: 425 INAAKKFVSGQKSMAASGNLGHTPFVDEL 453


>BC000484-1|AAH00484.1|  453|Homo sapiens UQCRC2 protein protein.
          Length = 453

 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 28/89 (31%), Positives = 44/89 (49%)
 Frame = -1

Query: 367 SLSADAIKAXKNQLKTQVLNEADTGSSLAESLAAQGLYTGSVRSAVDIAKDIDQISNNDI 188
           +LS   ++A KN+LK   L   ++     E + +Q L  GS      + + ID ++N DI
Sbjct: 365 NLSNTDVQAAKNKLKAGYLMSVESSECFLEEVGSQALVAGSYMPPSTVLQQIDSVANADI 424

Query: 187 SQAVSNAAKNKISIGAVGNLAFVPYIDEL 101
             A       + S+ A GNL   P++DEL
Sbjct: 425 INAAKKFVSGQKSMAASGNLGHTPFVDEL 453


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,863,160
Number of Sequences: 237096
Number of extensions: 1433553
Number of successful extensions: 2654
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2654
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)