Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_N16
(1086 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 27 0.13
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 27 0.13
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 27 0.60
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 27 0.84
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 27 0.84
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 27 4.3
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 29 4.4
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 29 4.4
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 29 4.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.4
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 4.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 24 4.8
AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical... 24 8.5
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 26.6 bits (56), Expect(2) = 0.13
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 822 PPPPPPPP 799
PPPPPPPP
Sbjct: 609 PPPPPPPP 616
Score = 26.6 bits (56), Expect(2) = 0.13
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 819 PPPPPPPXXXXXGG 778
PPPPPPP GG
Sbjct: 649 PPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 26.6 bits (56), Expect(2) = 0.13
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 822 PPPPPPPP 799
PPPPPPPP
Sbjct: 435 PPPPPPPP 442
Score = 26.6 bits (56), Expect(2) = 0.13
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 819 PPPPPPPXXXXXGG 778
PPPPPPP GG
Sbjct: 475 PPPPPPPPPSGAGG 488
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 26.6 bits (56), Expect(2) = 0.60
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 822 PPPPPPPP 799
PPPPPPPP
Sbjct: 576 PPPPPPPP 583
Score = 24.2 bits (50), Expect(2) = 7.9
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 819 PPPPPPPXXXXXG 781
PPPPPPP G
Sbjct: 576 PPPPPPPPPMLGG 588
Score = 24.2 bits (50), Expect(2) = 0.60
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 819 PPPPPPPXXXXXG 781
PPPPPPP G
Sbjct: 589 PPPPPPPPGGLMG 601
Score = 22.6 bits (46), Expect(2) = 7.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 822 PPPPPPPP 799
P PPPPPP
Sbjct: 559 PIPPPPPP 566
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 26.6 bits (56), Expect(2) = 0.84
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 822 PPPPPPPP 799
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
Score = 24.2 bits (50), Expect(2) = 6.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 819 PPPPPPPXXXXXG 781
PPPPPPP G
Sbjct: 307 PPPPPPPPGRTPG 319
Score = 23.8 bits (49), Expect(2) = 0.84
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 816 PPPPPPXXXXXGG 778
PPPPPP GG
Sbjct: 344 PPPPPPGMRYPGG 356
Score = 23.0 bits (47), Expect(2) = 6.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 822 PPPPPPPP 799
PP PPPPP
Sbjct: 271 PPVPPPPP 278
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 26.6 bits (56), Expect(2) = 0.84
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 822 PPPPPPPP 799
PPPPPPPP
Sbjct: 297 PPPPPPPP 304
Score = 24.2 bits (50), Expect(2) = 6.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 819 PPPPPPPXXXXXG 781
PPPPPPP G
Sbjct: 297 PPPPPPPPGRTPG 309
Score = 23.8 bits (49), Expect(2) = 0.84
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 816 PPPPPPXXXXXGG 778
PPPPPP GG
Sbjct: 334 PPPPPPGMRYPGG 346
Score = 23.0 bits (47), Expect(2) = 6.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 822 PPPPPPPP 799
PP PPPPP
Sbjct: 261 PPVPPPPP 268
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 26.6 bits (56), Expect(2) = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 822 PPPPPPPP 799
PPPPPPPP
Sbjct: 767 PPPPPPPP 774
Score = 21.4 bits (43), Expect(2) = 3.7
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -1
Query: 816 PPPPPPXXXXXGG 778
PPPPPP G
Sbjct: 794 PPPPPPLPPISSG 806
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 26.6 bits (56), Expect(2) = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 822 PPPPPPPP 799
PPPPPPPP
Sbjct: 767 PPPPPPPP 774
Score = 21.4 bits (43), Expect(2) = 3.7
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -1
Query: 816 PPPPPPXXXXXGG 778
PPPPPP G
Sbjct: 794 PPPPPPLPPISSG 806
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 26.6 bits (56), Expect(2) = 4.3
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 822 PPPPPPPP 799
PPPPPPPP
Sbjct: 39 PPPPPPPP 46
Score = 21.4 bits (43), Expect(2) = 4.3
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 816 PPPPPPXXXXXG 781
PPPPPP G
Sbjct: 54 PPPPPPPSYAGG 65
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 29.5 bits (63), Expect = 4.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 822 PPPPPPPPXXXXXGG 778
PPPPPPPP GG
Sbjct: 65 PPPPPPPPAFGGLGG 79
Score = 29.1 bits (62), Expect = 5.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 824 PPPPPPPPXXXXXXGG 777
PPPPPPPP GG
Sbjct: 65 PPPPPPPPAFGGLGGG 80
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 29.5 bits (63), Expect = 4.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 822 PPPPPPPPXXXXXGG 778
PPPPPPPP GG
Sbjct: 65 PPPPPPPPAFGGLGG 79
Score = 29.1 bits (62), Expect = 5.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 824 PPPPPPPPXXXXXXGG 777
PPPPPPPP GG
Sbjct: 65 PPPPPPPPAFGGLGGG 80
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 29.5 bits (63), Expect = 4.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 822 PPPPPPPPXXXXXGG 778
PPPPPPPP GG
Sbjct: 65 PPPPPPPPAFGGLGG 79
Score = 29.1 bits (62), Expect = 5.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 824 PPPPPPPPXXXXXXGG 777
PPPPPPPP GG
Sbjct: 65 PPPPPPPPAFGGLGGG 80
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 4.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 822 PPPPPPPPXXXXXGG 778
PPPPPPPP GG
Sbjct: 769 PPPPPPPPPGGFKGG 783
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 4.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 822 PPPPPPPPXXXXXGG 778
PPPPPPPP GG
Sbjct: 769 PPPPPPPPPGGFKGG 783
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 823 PPPPPPPPXXXXXXGGXXKKK 761
PPPPPPPP G KK+
Sbjct: 51 PPPPPPPPPPMCGCGCGRKKR 71
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 822 PPPPPPPPXXXXXGGXXXKKK 760
PPPPPPPP G KK+
Sbjct: 51 PPPPPPPPPPMCGCGCGRKKR 71
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 4.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 822 PPPPPPPPXXXXXGG 778
PPPPPPPP GG
Sbjct: 352 PPPPPPPPPGGFKGG 366
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 23.8 bits (49), Expect(2) = 4.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 824 PPPPPPP 804
PPPPPPP
Sbjct: 122 PPPPPPP 128
Score = 23.8 bits (49), Expect(2) = 4.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 821 PPPPPPP 801
PPPPPPP
Sbjct: 138 PPPPPPP 144
>AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical
protein Y39G10AR.17 protein.
Length = 549
Score = 24.2 bits (50), Expect(2) = 8.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 819 PPPPPPPXXXXXG 781
PPPPPPP G
Sbjct: 346 PPPPPPPPHPQQG 358
Score = 22.6 bits (46), Expect(2) = 8.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 822 PPPPPPPP 799
PPPP PPP
Sbjct: 315 PPPPIPPP 322
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,116,336
Number of Sequences: 27780
Number of extensions: 216977
Number of successful extensions: 7854
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3006
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2918964402
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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