Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_N13
         (1241 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    30   3.9  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    30   3.9  
AY551964-1|AAS65428.1|  795|Caenorhabditis elegans enhancer of p...    29   5.2  
AL132904-22|CAC35840.2|  795|Caenorhabditis elegans Hypothetical...    29   5.2  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    29   6.8  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    29   6.8  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    29   6.8  
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ...    29   6.8  
AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical ...    29   9.0  

>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = -1

Query: 287 PPPXXXXGAPXXGGGKXXXXPPXPPPP 207
           PPP    G P  G G     PP PPPP
Sbjct: 633 PPPPPPMGLPAVGAGAPP--PPPPPPP 657


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = -1

Query: 287 PPPXXXXGAPXXGGGKXXXXPPXPPPP 207
           PPP    G P  G G     PP PPPP
Sbjct: 459 PPPPPPMGLPAVGAG--APPPPPPPPP 483


>AY551964-1|AAS65428.1|  795|Caenorhabditis elegans enhancer of
           polycomb protein.
          Length = 795

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +2

Query: 209 GGGGXGGXXXIXPPLXXXPPXXXGGG 286
           GGGG GG   + PPL    P   G G
Sbjct: 659 GGGGGGGVVKLKPPLQELSPPLSGNG 684


>AL132904-22|CAC35840.2|  795|Caenorhabditis elegans Hypothetical
           protein Y111B2A.11 protein.
          Length = 795

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +2

Query: 209 GGGGXGGXXXIXPPLXXXPPXXXGGG 286
           GGGG GG   + PPL    P   G G
Sbjct: 659 GGGGGGGVVKLKPPLQELSPPLSGNG 684


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = -1

Query: 287 PPPXXXXGAPXXGGGKXXXXPPXPPPP 207
           PPP    G P   GG     PP PPPP
Sbjct: 743 PPPPPPGGLPPISGG----PPPPPPPP 765


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = -1

Query: 287 PPPXXXXGAPXXGGGKXXXXPPXPPPP 207
           PPP    G P   GG     PP PPPP
Sbjct: 743 PPPPPPGGLPPISGG----PPPPPPPP 765


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = -1

Query: 287 PPPXXXXGAPXXGGGKXXXXPPXPPPP 207
           PPP    G P   GG     PP PPPP
Sbjct: 326 PPPPPPGGLPPISGG----PPPPPPPP 348


>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
           protein Y48G9A.4 protein.
          Length = 1115

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -3

Query: 285 PPPXXXGGXXXRGGXXXXXPPXPPPP 208
           PPP    G     G     PP PPPP
Sbjct: 542 PPPPPIAGLLAANGTNVPIPPPPPPP 567


>AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical
            protein Y63D3A.5 protein.
          Length = 486

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 18/70 (25%), Positives = 22/70 (31%)
 Frame = +1

Query: 838  GXKXPGFFSRPPXXTXFSPPXXKKKXGXGRXPXXXQKXPXVXXPPPAVFXSPGGSXXXVX 1017
            G   P  F  P   +   PP           P      P    PPP+ F +P G      
Sbjct: 349  GAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGG 408

Query: 1018 FFFXAXPPGG 1047
              +   PPGG
Sbjct: 409  --YGPPPPGG 416


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,405,286
Number of Sequences: 27780
Number of extensions: 314005
Number of successful extensions: 1727
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3443371140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)