Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_N11
(834 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 26 0.43
U40956-1|AAA81756.1| 516|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 30 2.3
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 30 2.3
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 29 5.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 5.4
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 5.4
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 5.4
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 5.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 7.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 7.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 7.2
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 28 7.2
AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical ... 28 7.2
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 7.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 9.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 9.5
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 25.8 bits (54), Expect(2) = 0.43
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPP 592
PPP GG PPPP
Sbjct: 539 PPPPPVGMANGGPPPPPP 556
Score = 25.0 bits (52), Expect(2) = 7.5
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPPP 595
PPP G PPPPP
Sbjct: 538 PPPPPPVGMANGGPPPPPP 556
Score = 25.0 bits (52), Expect(2) = 0.43
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 566 GGGXXPPPPPXSXFFF 613
GG PPPPP F F
Sbjct: 574 GGPPPPPPPPPPSFMF 589
Score = 21.4 bits (43), Expect(2) = 7.5
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +2
Query: 572 GXXPPPPPXSXFFFXFXKK 628
G PPPPP F F K
Sbjct: 574 GGPPPPPPPPPPSFMFNGK 592
>U40956-1|AAA81756.1| 516|Caenorhabditis elegans Hypothetical
protein ZK402.5 protein.
Length = 516
Score = 31.5 bits (68), Expect = 0.77
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1
Query: 645 FFXXFFFXXKXKKKXEXGGGGGXXPPP 565
FF FF+ K +KK GGG PPP
Sbjct: 463 FFSFFFWDEKIRKKISRGGGLNSSPPP 489
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPPP 595
PPP GGG PPPPP
Sbjct: 40 PPPPPPPCGGGYEAPPPPP 58
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPPPXS 601
PPP GG PPPPP S
Sbjct: 41 PPPPPPCGGGYEAPPPPPPPS 61
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPPP 595
PPP GGG PPPPP
Sbjct: 35 PPPACGNPCGGGFGPPPPP 53
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 594 GGGGGXXPPPPXXXXXGGG 538
GGGGG PPP GGG
Sbjct: 266 GGGGGYPQPPPQQGGGGGG 284
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPPP 595
PPP GG PPPPP
Sbjct: 125 PPPPRKSRAGGSSPPPPPP 143
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPPP 595
PPP GG PPPPP
Sbjct: 126 PPPRKSRAGGSSPPPPPPP 144
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPPP 595
PPP GG PPPPP
Sbjct: 124 PPPPPRKSRAGGSSPPPPP 142
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPPP 595
PPP G G PPPPP
Sbjct: 235 PPPPLPPVGAGAPPPPPPP 253
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPPP 595
PPP G G PPPPP
Sbjct: 221 PPPPLPPVGAGAPPPPPPP 239
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPPP 595
PPP G G PPPPP
Sbjct: 221 PPPPLPPVGAGAPPPPPPP 239
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPPPXSXF 607
PPP GG PPPPP F
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGF 780
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPPPXSXF 607
PPP G G PPPPP F
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPGMF 793
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPPPXSXFF 610
PPP GG PPPPP F
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPPPXSXF 607
PPP GG PPPPP F
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGF 780
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPPPXSXF 607
PPP G G PPPPP F
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPGMF 793
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPPPXSXFF 610
PPP GG PPPPP F
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPPGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPPPXSXF 607
PPP GG PPPPP F
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGF 363
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPPPXSXF 607
PPP G G PPPPP F
Sbjct: 354 PPPPPPPGGFKGGPPPPPPPGMF 376
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPPPXSXFF 610
PPP GG PPPPP F
Sbjct: 353 PPPPPPPPGGFKGGPPPPPPPGMF 376
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 594 GGGGGXXPPPPXXXXXGGG 538
GGG G PPPP GGG
Sbjct: 24 GGGCGCAPPPPPACGCGGG 42
>AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical
protein Y50D4C.3 protein.
Length = 605
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 521 FFFFXLPPPXXXXXGGGGXXPPPPPXS 601
+FF PP GG PPPPP S
Sbjct: 472 YFFQQGPPRGGQFHGGSQQGPPPPPPS 498
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 594 GGGGGXXPPPPXXXXXGGGR 535
GGG G PPPP GG R
Sbjct: 205 GGGSGRFPPPPPPYGGGGRR 224
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPPP 595
PPP G G PPPPP
Sbjct: 350 PPPPRYPSAGPGMYPPPPP 368
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 539 PPPXXXXXGGGGXXPPPPP 595
PPP G G PPPPP
Sbjct: 360 PPPPRYPSAGPGMYPPPPP 378
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,903,354
Number of Sequences: 27780
Number of extensions: 148501
Number of successful extensions: 1057
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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