Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_N05
(869 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 38 0.012
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 35 0.066
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 35 0.066
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 33 0.27
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.27
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.35
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 32 0.61
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 32 0.61
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical ... 31 1.1
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 31 1.1
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 31 1.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 1.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 1.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 1.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 1.9
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.5
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 30 2.5
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 30 2.5
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 30 2.5
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 30 2.5
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 30 2.5
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 30 2.5
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 30 2.5
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.3
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 3.3
U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protei... 29 3.3
U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protei... 29 3.3
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 3.3
U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protei... 29 3.3
U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protei... 29 3.3
U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protei... 29 3.3
U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protei... 29 3.3
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 3.3
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 29 3.3
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 3.3
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 4.3
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 29 5.7
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 5.7
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 5.7
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 5.7
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 5.7
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 5.7
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 29 5.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.7
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 5.7
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 29 5.7
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 7.5
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 28 7.5
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 28 7.5
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 28 7.5
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 28 7.5
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 10.0
Z69383-13|CAA93404.2| 181|Caenorhabditis elegans Hypothetical p... 28 10.0
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 10.0
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/64 (34%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGG---XXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGX 698
PP G+ R P GEP GG P PP R AP PG G G +G
Sbjct: 183 PPGQPGQPGQRGPPGEPGALLPGGDAPPGPSGPPGRPGAPGQPGKAGSPGQDGSNGDAGV 242
Query: 697 XPRP 686
P
Sbjct: 243 AGEP 246
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 35.1 bits (77), Expect = 0.066
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXX-PGXXXPRGXXGGXXGSGXXP 692
PP G GEP G P P PG P G G GS P
Sbjct: 142 PPGRPGPDGENGGAGEPGRDGLAGRPGARGSPGPRGPSGNPGADGPAGQLGPQGGSNVAP 201
Query: 691 RPAXEP 674
PA EP
Sbjct: 202 SPAGEP 207
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 35.1 bits (77), Expect = 0.066
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXX-PGXXXPRGXXGGXXGSGXXP 692
PP G GEP G P P PG P G G GS P
Sbjct: 195 PPGRPGPDGENGGAGEPGRDGLAGRPGARGSPGPRGPSGNPGADGPAGQLGPQGGSNVAP 254
Query: 691 RPAXEP 674
PA EP
Sbjct: 255 SPAGEP 260
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 33.1 bits (72), Expect = 0.27
Identities = 26/88 (29%), Positives = 27/88 (30%), Gaps = 3/88 (3%)
Frame = +3
Query: 615 PXNSPPXXXPX---PPXFXXXXXGSXAGRGSXPDPXXPPXXPRGXXXPGXXGAXXRGGGW 785
P PP P P G G DP PP G G G GG
Sbjct: 130 PGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGG- 188
Query: 786 RGXXPPXGFXXGSPPGSLWXXLPXXAGG 869
+G P G G PPG P GG
Sbjct: 189 QGGPPGHGGMGGPPPGQGGPGGPGGPGG 216
Score = 27.9 bits (59), Expect = 10.0
Identities = 25/86 (29%), Positives = 26/86 (30%), Gaps = 1/86 (1%)
Frame = +3
Query: 615 PXNSPPXXXPXPPXFXXXXXGSXAGRGSXPDPXXP-PXXPRGXXXPGXXGAXXRGGGWRG 791
P PP P P G G G P P P+G GGG
Sbjct: 106 PGGVPPQAQPFNPH-GGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDP 164
Query: 792 XXPPXGFXXGSPPGSLWXXLPXXAGG 869
PP G G PPG P GG
Sbjct: 165 RGPPGGM--GGPPGHGGMGGPPGHGG 188
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 33.1 bits (72), Expect = 0.27
Identities = 26/88 (29%), Positives = 27/88 (30%), Gaps = 3/88 (3%)
Frame = +3
Query: 615 PXNSPPXXXPX---PPXFXXXXXGSXAGRGSXPDPXXPPXXPRGXXXPGXXGAXXRGGGW 785
P PP P P G G DP PP G G G GG
Sbjct: 410 PGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGG- 468
Query: 786 RGXXPPXGFXXGSPPGSLWXXLPXXAGG 869
+G P G G PPG P GG
Sbjct: 469 QGGPPGHGGMGGPPPGQGGPGGPGGPGG 496
Score = 27.9 bits (59), Expect = 10.0
Identities = 25/86 (29%), Positives = 26/86 (30%), Gaps = 1/86 (1%)
Frame = +3
Query: 615 PXNSPPXXXPXPPXFXXXXXGSXAGRGSXPDPXXP-PXXPRGXXXPGXXGAXXRGGGWRG 791
P PP P P G G G P P P+G GGG
Sbjct: 386 PGGVPPQAQPFNPH-GGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDP 444
Query: 792 XXPPXGFXXGSPPGSLWXXLPXXAGG 869
PP G G PPG P GG
Sbjct: 445 RGPPGGM--GGPPGHGGMGGPPGHGG 468
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.7 bits (71), Expect = 0.35
Identities = 24/72 (33%), Positives = 26/72 (36%)
Frame = +3
Query: 615 PXNSPPXXXPXPPXFXXXXXGSXAGRGSXPDPXXPPXXPRGXXXPGXXGAXXRGGGWRGX 794
P + PP PP G+ G G P PP P G PG G G G G
Sbjct: 382 PQSGPPGAFAPPPS----AFGAPQGPGG-PGGYGPPP-PGGPGAPGSYGPPQGGPGGFGP 435
Query: 795 XPPXGFXXGSPP 830
PP G PP
Sbjct: 436 PPPGGPGAYGPP 447
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 31.9 bits (69), Expect = 0.61
Identities = 19/64 (29%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAP-XXPGXXXPRGXXGGXXGSGXXPR 689
P GK G P P P+ PPP P PG P G G G+G
Sbjct: 81 PGRPGKPGAPGLPGNPGHPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGNPGS 140
Query: 688 PAXE 677
P +
Sbjct: 141 PGQD 144
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 31.9 bits (69), Expect = 0.61
Identities = 19/64 (29%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAP-XXPGXXXPRGXXGGXXGSGXXPR 689
P GK G P P P+ PPP P PG P G G G+G
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGNPGS 173
Query: 688 PAXE 677
P +
Sbjct: 174 PGQD 177
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPR 689
P G P GEP G P P PG P G GG GS P
Sbjct: 187 PDGDSGPNGEAGPNGEPGAPGKDGEKGKGEPGPAGPPGPPGPGGPPGDAGG-AGSDGAPG 245
Query: 688 PAXEP 674
P P
Sbjct: 246 PQGPP 250
>AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical
protein Y81G3A.5 protein.
Length = 323
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +3
Query: 684 AGRGSXPDPXXPPXXPRGXXXPGXXGAXXRGGGWRGXXPPXGFXXGSPPGS 836
AG P P PP P PG G G G G PP G P G+
Sbjct: 143 AGPMGSPGPDGPPGVPGATGNPGSLGESSLGAGSPG--PPGGVGPPGPNGT 191
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 607 PXTPXIXXPPXXPXPXXXXXXXXVPAPAAXXXXTPPXPRXPP 732
P P + P P P V PA TPP P PP
Sbjct: 341 PDAPKVEEPEPAPTPAPAPAEDPVVTPAPEELTTPPPPAPPP 382
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/61 (36%), Positives = 22/61 (36%)
Frame = +3
Query: 651 PXFXXXXXGSXAGRGSXPDPXXPPXXPRGXXXPGXXGAXXRGGGWRGXXPPXGFXXGSPP 830
P F G P P PP P G PG G RGG RG P G PP
Sbjct: 133 PEFCFDCPAGPPGAVGGPGPKGPPGPPGG---PGELGGPGRGGN-RGPPGPRG-----PP 183
Query: 831 G 833
G
Sbjct: 184 G 184
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/61 (36%), Positives = 22/61 (36%)
Frame = +3
Query: 651 PXFXXXXXGSXAGRGSXPDPXXPPXXPRGXXXPGXXGAXXRGGGWRGXXPPXGFXXGSPP 830
P F G P P PP P G PG G RGG RG P G PP
Sbjct: 133 PEFCFDCPAGPPGAVGGPGPKGPPGPPGG---PGELGGPGRGGN-RGPPGPRG-----PP 183
Query: 831 G 833
G
Sbjct: 184 G 184
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPR 689
PP G GG P P G P PPPR P G G+G P
Sbjct: 273 PPPPTGSPPPPPAGGSPPP-PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
Query: 688 P 686
P
Sbjct: 332 P 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPR 689
PP G GG P P G P PPPR P G G+G P
Sbjct: 294 PPPPTGSPPPPPAGGSPPP-PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
Query: 688 P 686
P
Sbjct: 353 P 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPR 689
PP G GG P P G P PPPR P G G+G P
Sbjct: 279 PPPPTGSPPPPPAGGSPPP-PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
Query: 688 P 686
P
Sbjct: 338 P 338
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPR 689
PP G PGG P P G P PPP P G P GG P
Sbjct: 720 PPITGGPPPPPPPGGLP---PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 688 P 686
P
Sbjct: 777 P 777
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Frame = -2
Query: 829 GGEPXXXPXGGXXPLH--PPPRXXAPXXPGXXXPRGXXGGXXGSGXXPRP 686
GG P P GG P+ PPP P P GG G P P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -2
Query: 832 PGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPRPAXEP 674
P P P G P PPP P G P G SG P P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPR 689
PP G PGG P P G P PPP P G P GG P
Sbjct: 720 PPITGGPPPPPPPGGLP---PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 688 P 686
P
Sbjct: 777 P 777
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Frame = -2
Query: 829 GGEPXXXPXGGXXPLH--PPPRXXAPXXPGXXXPRGXXGGXXGSGXXPRP 686
GG P P GG P+ PPP P P GG G P P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -2
Query: 832 PGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPRPAXEP 674
P P P G P PPP P G P G SG P P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPR 689
PP G PGG P P G P PPP P G P GG P
Sbjct: 303 PPITGGPPPPPPPGGLP---PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Query: 688 P 686
P
Sbjct: 360 P 360
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Frame = -2
Query: 829 GGEPXXXPXGGXXPLH--PPPRXXAPXXPGXXXPRGXXGGXXGSGXXPRP 686
GG P P GG P+ PPP P P GG G P P
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -2
Query: 832 PGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPRPAXEP 674
P P P G P PPP P G P G SG P P P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 622 IXXPPXXPXPXXXXXXXXVPAPAAXXXXTPPXPRXPPGG 738
I PP P P P P PP P PPGG
Sbjct: 560 IPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGG 598
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/54 (33%), Positives = 21/54 (38%)
Frame = +3
Query: 621 NSPPXXXPXPPXFXXXXXGSXAGRGSXPDPXXPPXXPRGXXXPGXXGAXXRGGG 782
+SP P P G+ G GS P P P P PG GA + GG
Sbjct: 169 SSPGPAGPAGPPGPPGPDGAPGG-GSGPGPAGPAGPPGPDGNPGSAGADGQPGG 221
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/62 (30%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHP-PPRXXAPXXPGXXXPRGXXGGXXGSGXXPR 689
P G+ G P GG P HP P P G P G G G R
Sbjct: 115 PGKPGRPGAPGAWGMPGNPGKGGSGPCHPVVPTPCKPCPGGRPGPPGPPGRPGSDGQPGR 174
Query: 688 PA 683
PA
Sbjct: 175 PA 176
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/54 (33%), Positives = 21/54 (38%)
Frame = +3
Query: 621 NSPPXXXPXPPXFXXXXXGSXAGRGSXPDPXXPPXXPRGXXXPGXXGAXXRGGG 782
+SP P P G+ G GS P P P P PG GA + GG
Sbjct: 169 SSPGPAGPAGPPGPPGPDGAPGG-GSGPGPAGPAGPPGPDGNPGSAGADGQPGG 221
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAP-XXPGXXXPRGXXGGXXGSGXXPR 689
P G+ G P P P PPP P PG P G G +G R
Sbjct: 116 PGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGR 175
Query: 688 PAXE 677
P +
Sbjct: 176 PGTD 179
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXG--GXXGSGXX 695
PP G+ P GEP G + P AP PG P G G G G+
Sbjct: 190 PPGPAGEAGAPGPAGEP------GTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGP 243
Query: 694 PRP 686
P P
Sbjct: 244 PGP 246
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXP-GXXXPRGXXGGXXGSGXXPR 689
P GK G P P P+ PPP P P G P G G +G
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGA 173
Query: 688 PAXE 677
P +
Sbjct: 174 PGQD 177
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXP-GXXXPRGXXGGXXGSGXXPR 689
P GK G P P P+ PPP P P G P G G +G
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGA 173
Query: 688 PAXE 677
P +
Sbjct: 174 PGND 177
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXP-GXXXPRGXXGGXXGSGXXPR 689
P GK G P P P+ PPP P P G P G G +G
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGA 173
Query: 688 PAXE 677
P +
Sbjct: 174 PGND 177
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.5
Identities = 25/74 (33%), Positives = 25/74 (33%)
Frame = -2
Query: 802 GGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPRPAXEPXXXXXXXGGXGXXXGGE 623
GG PPP AP G G GG G G P PA P GG G GG
Sbjct: 43 GGGGGCAPPP---APCGGGCGGGGGGCGG--GGGCAPPPA--PCGGGCGGGGGGCGGGGG 95
Query: 622 XXGXXEXXXXAGXG 581
G G G
Sbjct: 96 GCGGGGGCGGGGGG 109
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.5
Identities = 25/74 (33%), Positives = 25/74 (33%)
Frame = -2
Query: 802 GGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPRPAXEPXXXXXXXGGXGXXXGGE 623
GG PPP AP G G GG G G P PA P GG G GG
Sbjct: 43 GGGGGCAPPP---APCGGGCGGGGGGCGG--GGGCAPPPA--PCGGGCGGGGGGCGGGGG 95
Query: 622 XXGXXEXXXXAGXG 581
G G G
Sbjct: 96 GCGGGGGCGGGGGG 109
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAP-XXPGXXXPRGXXGGXXGSGXXPR 689
P G+ G P P P PPP P PG P G G +G R
Sbjct: 111 PGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGR 170
Query: 688 PAXE 677
P +
Sbjct: 171 PGTD 174
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXG--GXXGSGXX 695
PP G+ P GEP G + P AP PG P G G G G+
Sbjct: 185 PPGPAGEAGAPGPAGEP------GTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGP 238
Query: 694 PRP 686
P P
Sbjct: 239 PGP 241
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +3
Query: 684 AGRGSXPDPXXPPXXPRGXXXPGXXGAXXRGGGWRGXXPPXG 809
AG P P PP P G PG G GG RG P G
Sbjct: 149 AGPAGGPGPKGPPGPPGGHGEPGPAGR----GGPRGPPGPGG 186
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/66 (28%), Positives = 21/66 (31%), Gaps = 2/66 (3%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXG--GXXGSGXXP 692
PA +PG P G P P P PG P G G G G+ P
Sbjct: 210 PAVCEPVQKGEPGSTGEPGPVGPPGPSGQPGNDGTPGQPGPKGPPGPDGKPGADGNPGQP 269
Query: 691 RPAXEP 674
P P
Sbjct: 270 GPVGPP 275
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/66 (28%), Positives = 21/66 (31%), Gaps = 2/66 (3%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXG--GXXGSGXXP 692
PA +PG P G P P P PG P G G G G+ P
Sbjct: 210 PAVCEPVQKGEPGSTGEPGPVGPPGPSGQPGNDGTPGQPGPKGPPGPDGKPGADGNPGQP 269
Query: 691 RPAXEP 674
P P
Sbjct: 270 GPVGPP 275
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAP-XXPGXXXPRGXXGGXXGSGXXPR 689
P G+ G P P P PPP P PG P G G +G R
Sbjct: 111 PGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGR 170
Query: 688 PAXE 677
P +
Sbjct: 171 PGTD 174
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXG--GXXGSGXX 695
PP G+ P GEP G + P AP PG P G G G G+
Sbjct: 185 PPGPAGEAGAPGPAGEP------GTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGP 238
Query: 694 PRP 686
P P
Sbjct: 239 PGP 241
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXP-GXXXPRGXXGGXXGSGXXPR 689
P GK G P P P+ PPP P P G P G G +G
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGA 173
Query: 688 PAXE 677
P +
Sbjct: 174 PGND 177
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXP-GXXXPRGXXGGXXGSGXXPR 689
P GK G P P P+ PPP P P G P G G +G
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGA 173
Query: 688 PAXE 677
P +
Sbjct: 174 PGND 177
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAP-XXPGXXXPRGXXGGXXGSGXXPR 689
P GK G P P P+ PPP P PG P G G +G
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGSNGNPGS 173
Query: 688 PAXE 677
P +
Sbjct: 174 PGQD 177
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/85 (27%), Positives = 24/85 (28%)
Frame = -2
Query: 835 DPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPRPAXEPXXXXXX 656
+P P P P PP P PG P G G G G P P
Sbjct: 155 EPSTPPPCQPCPAGPP-GPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPG--PAGPPGN 211
Query: 655 XGGXGXXXGGEXXGXXEXXXXAGXG 581
G G G G AG G
Sbjct: 212 DGQPGQPGGPGQDGASSAGGEAGPG 236
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/63 (28%), Positives = 20/63 (31%), Gaps = 3/63 (4%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAP---XXPGXXXPRGXXGGXXGSGX 698
P G P G+ GG P PP P PG P G GG G
Sbjct: 237 PAGPPGPAGPAGPDGQSGSGSAGGPGPKGPPGPAGQPGSDGNPGTAGPPGNPGGEGEKGI 296
Query: 697 XPR 689
P+
Sbjct: 297 CPK 299
Score = 27.9 bits (59), Expect = 10.0
Identities = 19/81 (23%), Positives = 20/81 (24%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPR 689
P G P G P G P PP P PG G +G P
Sbjct: 179 PGEPGGPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQPGQPGGPGQDGASSAGGEAGPGPA 238
Query: 688 PAXEPXXXXXXXGGXGXXXGG 626
P G G G
Sbjct: 239 GPPGPAGPAGPDGQSGSGSAG 259
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXG--GXXGSGXX 695
P GK + P G P P G P PP PG P G G G GS
Sbjct: 211 PTGEPGKVINGAPPGPPG--PPGPPGPQGPPGPPGKDGQPGKAGPPGLPGDPGEKGSDGL 268
Query: 694 PRP 686
P P
Sbjct: 269 PGP 271
>U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protein
166, isoform b protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/60 (30%), Positives = 22/60 (36%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPRP 686
P GK + PG G P P AP PG P+G G G+G +P
Sbjct: 213 PGAPGKV-NEVPGPAGAPGAPGPDGPAGPAGSPGAPGNPGSQGPQGPAGDNGGAGSPGQP 271
>U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protein
166, isoform a protein.
Length = 363
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/60 (30%), Positives = 22/60 (36%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPRP 686
P GK + PG G P P AP PG P+G G G+G +P
Sbjct: 275 PGAPGKV-NEVPGPAGAPGAPGPDGPAGPAGSPGAPGNPGSQGPQGPAGDNGGAGSPGQP 333
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXP-GXXXPRGXXGGXXGSGXXPR 689
P G+ G P P P PPP P P G P G G +G R
Sbjct: 118 PGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGR 177
Query: 688 PAXE 677
P +
Sbjct: 178 PGTD 181
>U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protein
170 protein.
Length = 300
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/60 (30%), Positives = 22/60 (36%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPRP 686
P GK + PG G P P AP PG P+G G G+G +P
Sbjct: 212 PGAPGKV-NEVPGPAGAPGAPGPDGPAGPAGSPGAPGNPGSQGPQGPAGDNGGAGSPGQP 270
>U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protein
169 protein.
Length = 300
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/60 (30%), Positives = 22/60 (36%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPRP 686
P GK + PG G P P AP PG P+G G G+G +P
Sbjct: 212 PGAPGKV-NEVPGPAGAPGAPGPDGPAGPAGSPGAPGNPGSQGPQGPAGDNGGAGSPGQP 270
>U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protein
168 protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/60 (30%), Positives = 22/60 (36%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPRP 686
P GK + PG G P P AP PG P+G G G+G +P
Sbjct: 213 PGAPGKV-NEVPGPAGAPGAPGPDGPAGPAGSPGAPGNPGSQGPQGPAGDNGGAGSPGQP 271
>U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protein
167 protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/60 (30%), Positives = 22/60 (36%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPRP 686
P GK + PG G P P AP PG P+G G G+G +P
Sbjct: 213 PGAPGKV-NEVPGPAGAPGAPGPDGPAGPAGSPGAPGNPGSQGPQGPAGDNGGAGSPGQP 271
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/66 (28%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXG--GXXGSGXXP 692
P G+ GG P G P PP AP P G G G G+ P
Sbjct: 238 PGQPGRPGKNAQGGSSRPGPPGPAGPPGPPGNNGAPGGGYGVGPPGPPGPSGRPGAPGQP 297
Query: 691 RPAXEP 674
P +P
Sbjct: 298 GPDGQP 303
Score = 27.9 bits (59), Expect = 10.0
Identities = 22/85 (25%), Positives = 22/85 (25%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPR 689
PP G PG G P PP P PG P G G G
Sbjct: 257 PPGPAGPPG--PPGNNGAPGGGYGVGPPGPPGPSGRPGAPGQPGPDGQPGAPGNDGTPGT 314
Query: 688 PAXEPXXXXXXXGGXGXXXGGEXXG 614
A GG G G G
Sbjct: 315 DAAYCPCPGRGGGGGGYGAGAHHGG 339
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/67 (31%), Positives = 23/67 (34%), Gaps = 3/67 (4%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXP-GXXXPRGXXG--GXXGSGXX 695
P GK G P P P+ PPP P P G P G G G GS
Sbjct: 119 PGRPGKAGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPAGPPGPPGPAGDAGSDGSPGA 178
Query: 694 PRPAXEP 674
P +P
Sbjct: 179 PGSDGQP 185
Score = 27.9 bits (59), Expect = 10.0
Identities = 18/73 (24%), Positives = 20/73 (27%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPRP 686
P GK PG P G P P + PG P+G G G P
Sbjct: 209 PGEDGKSEPITPGAPGPAGPPGPQGPPGAPGQPGHDGQPGTPGPKGPNGNPGAPGADGNP 268
Query: 685 AXEPXXXXXXXGG 647
GG
Sbjct: 269 GTPGVAGVAGSGG 281
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXP-GXXXPRGXXGGXXGSGXXPR 689
P G+ G P P P PPP P P G P G G +G R
Sbjct: 118 PGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGR 177
Query: 688 PAXE 677
P +
Sbjct: 178 PGTD 181
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 735 GXXXPGXXGAXXRGGGWRGXXPPXGFXXGSPPGSLW 842
G PG G RGGGW G + G P W
Sbjct: 242 GQQGPGGWGGGGRGGGWGGWGRGSRWGWGRPSWGGW 277
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXP 749
PP GK + P GEP G L PP P P
Sbjct: 190 PPGPPGKQGPKGPNGEPGAPGTPGGNALPGPPGPPGPQGP 229
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 7/60 (11%)
Frame = -2
Query: 832 PGGEPXXXPXGGXXPLHPPPRXXAP--XXPGXXXPRGXXG-----GXXGSGXXPRPAXEP 674
PG P G P+ PP + AP PG P G G G GS P P +P
Sbjct: 252 PGTPGPAGPPGPPGPIGPPGQPGAPGSSQPGPQGPPGDPGIDGAPGNPGSPGEPGPPGQP 311
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSG 701
PP G P G+P G P PP P G G G GSG
Sbjct: 266 PPGPQGPPGLAGPDGQPGHGGGGQPGPQGPPGDDGHPGEDGGAGGPGQPGQDGGSG 321
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = -2
Query: 832 PGGEPXXXPXGGXX-PLHPPPRXXAPXXPGXXXPRGXXGGXXG 707
P P P GG P+ P AP PG P G GG G
Sbjct: 765 PVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = -2
Query: 832 PGGEPXXXPXGGXX-PLHPPPRXXAPXXPGXXXPRGXXGGXXG 707
P P P GG P+ P AP PG P G GG G
Sbjct: 765 PVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
>Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical
protein W08D2.6 protein.
Length = 358
Score = 28.7 bits (61), Expect = 5.7
Identities = 24/95 (25%), Positives = 27/95 (28%), Gaps = 1/95 (1%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPR 689
P G+ H G P G P PP PG +G GG G R
Sbjct: 261 PKGQKGETGHPGAQGTP-----GHNGPTGPPGDAGPDGGPGPQGEQGADGGPGSEGKVGR 315
Query: 688 PAXE-PXXXXXXXGGXGXXXGGEXXGXXEXXXXAG 587
P + G G GG G E G
Sbjct: 316 PGRDAEYCHCPARGSHGGSSGGGGGGGGEYKATGG 350
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPR 689
PP P G P P G PL PP P P G G G P
Sbjct: 133 PPCKPCPEGPPGPAGPPG--PQGNKGPLGPPG-PPGPEGPNGTAGNKGPAGPPGPGGKPG 189
Query: 688 PAXEP 674
PA P
Sbjct: 190 PAGPP 194
Score = 27.9 bits (59), Expect = 10.0
Identities = 23/82 (28%), Positives = 24/82 (29%), Gaps = 2/82 (2%)
Frame = -2
Query: 853 GKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAP-XXPGXXXPRGXXGGXXGSGXXPRPAXE 677
GK G P P P+ PPP P PG P G G G P E
Sbjct: 108 GKPGAPGLNGNPGRPPKEPCEPITPPPCKPCPEGPPGPAGPPGPQGNKGPLGPPGPPGPE 167
Query: 676 -PXXXXXXXGGXGXXXGGEXXG 614
P G G G G
Sbjct: 168 GPNGTAGNKGPAGPPGPGGKPG 189
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXP-GXXXPRGXXGGXXGSGXXPR 689
P GK G P P P+ PPP P P G P G G +G
Sbjct: 119 PGRPGKPGAPGLPGNPGKPPVQPCEPITPPPCKPCPDGPAGPPGPPGAPGDAGTNGAPGA 178
Query: 688 PAXE 677
P +
Sbjct: 179 PGGD 182
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = -2
Query: 832 PGGEPXXXPXGGXX-PLHPPPRXXAPXXPGXXXPRGXXGGXXG 707
P P P GG P+ P AP PG P G GG G
Sbjct: 765 PVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 28.7 bits (61), Expect = 5.7
Identities = 24/82 (29%), Positives = 24/82 (29%), Gaps = 2/82 (2%)
Frame = -2
Query: 853 GKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAP-XXPGXXXPRGXXGGXXGSGXXPRPAXE 677
GK G P P PL PPP P PG P G G G P E
Sbjct: 110 GKPGAPGLNGNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPE 169
Query: 676 -PXXXXXXXGGXGXXXGGEXXG 614
P G G G G
Sbjct: 170 GPNGEPGNKGPAGPPGPGGKPG 191
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPR 689
PP P G P P G PL PP P P G G G P
Sbjct: 135 PPCKPCPEGPPGPAGPPG--PDGNKGPLGPPG-PPGPEGPNGEPGNKGPAGPPGPGGKPG 191
Query: 688 PAXEP 674
PA P
Sbjct: 192 PAGPP 196
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = -2
Query: 832 PGGEPXXXPXGGXX-PLHPPPRXXAPXXPGXXXPRGXXGGXXG 707
P P P GG P+ P AP PG P G GG G
Sbjct: 765 PVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Frame = -2
Query: 868 PPAXXGKXX-HRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSG 701
PP G H DPG P G P PP P G RG G SG
Sbjct: 211 PPGEPGPPGAHGDPGDLGEEGPPGLPGPKGPPGASGIPGNDGPPGARGQPGLSGDSG 267
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/64 (32%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Frame = +3
Query: 648 PPXFXXXXXGSXAGRGSXPDPXXPPXXPRGXXXPGXXGAXXRGGG--WRGXXPPXGFXXG 821
PP G GRG P P RG P G GG RG P G
Sbjct: 1451 PPMRGMPPLGMMRGRGGPPPPRGMNSPMRGMPPPMRGGGPPMRGGPPMRGGPP---MFRG 1507
Query: 822 SPPG 833
PPG
Sbjct: 1508 GPPG 1511
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Frame = +3
Query: 684 AGRGSXPDPXXPPXXPRGXXXPGXXGAXXRGG--GWRGXXPPXGFXXGSPPG 833
AG P P PP P PG G + G G P G PPG
Sbjct: 207 AGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGPPG 258
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/56 (26%), Positives = 17/56 (30%)
Frame = +3
Query: 615 PXNSPPXXXPXPPXFXXXXXGSXAGRGSXPDPXXPPXXPRGXXXPGXXGAXXRGGG 782
P P P PP A + P P PP PG G + GG
Sbjct: 248 PGGPGPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDGG 303
Score = 27.9 bits (59), Expect = 10.0
Identities = 21/76 (27%), Positives = 23/76 (30%)
Frame = -2
Query: 868 PPAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAPXXPGXXXPRGXXGGXXGSGXXPR 689
PP G + P G P G PPP P PG P G G G +
Sbjct: 182 PPGPPGPDGNAGPAGAPGVPGPDGDAGSPPPPGPPGP--PG---PPGNDGQPGAPGQDGQ 236
Query: 688 PAXEPXXXXXXXGGXG 641
P GG G
Sbjct: 237 PGAPGTNTVNSPGGPG 252
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/67 (29%), Positives = 22/67 (32%), Gaps = 3/67 (4%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAP-XXPGXXXPRGXXG--GXXGSGXX 695
P GK G P P P+ PPP P PG P G G G G
Sbjct: 112 PGRPGKPGVAGLPGNPGRPPQAPCDPITPPPCKPCPQGPPGVQGPPGPAGDAGLDGQPGG 171
Query: 694 PRPAXEP 674
P +P
Sbjct: 172 PGQDGQP 178
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 28.3 bits (60), Expect = 7.5
Identities = 21/71 (29%), Positives = 24/71 (33%), Gaps = 7/71 (9%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPP-----PRXXAPXXPGXXXPRGXXG--GXXG 707
P G+ P G P G P PP P+ P PG PRG G G G
Sbjct: 181 PGQPGQPGPHGPNGHPGKP--GSQGPPGPPGHSDEPKPGQPGQPGRAGPRGPRGVAGIKG 238
Query: 706 SGXXPRPAXEP 674
P +P
Sbjct: 239 KDGAPGSPGQP 249
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/64 (26%), Positives = 17/64 (26%)
Frame = +3
Query: 642 PXPPXFXXXXXGSXAGRGSXPDPXXPPXXPRGXXXPGXXGAXXRGGGWRGXXPPXGFXXG 821
P P F AG P P PP P G G G PP
Sbjct: 132 PTPADFCFECPPGPAGNAGNPGPKGPPGQPGAPGEQGPNGRPGAPGAPGPQGPPGTAGND 191
Query: 822 SPPG 833
PG
Sbjct: 192 GTPG 195
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 3/61 (4%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAP-XXPGXXXPRGXXG--GXXGSGXX 695
P GK G P P P+ PPP P PG P G G G GS
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGL 173
Query: 694 P 692
P
Sbjct: 174 P 174
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 3/61 (4%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAP-XXPGXXXPRGXXG--GXXGSGXX 695
P GK G P P P+ PPP P PG P G G G GS
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCEPITPPPWKPCPQGPPGPPGPPGPPGDSGEPGSPGL 173
Query: 694 P 692
P
Sbjct: 174 P 174
Score = 27.9 bits (59), Expect = 10.0
Identities = 25/81 (30%), Positives = 29/81 (35%), Gaps = 16/81 (19%)
Frame = -2
Query: 868 PPAXXGKXXHRD----PGGEPXXX----PXGGXXPLHPPPRXX------APXXPGXXXPR 731
PP G H++ P GEP P G P PP +P PG P
Sbjct: 191 PPGAPGAPEHQESQECPRGEPLIPGEPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGPN 250
Query: 730 GXXG--GXXGSGXXPRPAXEP 674
G G G G+ P PA P
Sbjct: 251 GPDGQPGADGNPGAPGPAGPP 271
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 3/61 (4%)
Frame = -2
Query: 865 PAXXGKXXHRDPGGEPXXXPXGGXXPLHPPPRXXAP-XXPGXXXPRGXXG--GXXGSGXX 695
P GK G P P P+ PPP P PG P G G G GS
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGL 173
Query: 694 P 692
P
Sbjct: 174 P 174
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.9 bits (59), Expect = 10.0
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +1
Query: 592 PXXXXPXTPXIXXPPXXPXPXXXXXXXXVPAPAAXXXXTPPXPRXPP 732
P P P P P P PAPAA PP P P
Sbjct: 85 PPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSP 131
>Z69383-13|CAA93404.2| 181|Caenorhabditis elegans Hypothetical
protein F13E9.8 protein.
Length = 181
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 784 HPPPRXXAPXXPGXXXPRGXXGGXXGSG 701
HP P P PG RG GG G G
Sbjct: 130 HPGPPHGGPGGPGGPGGRGGRGGHGGPG 157
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/54 (29%), Positives = 17/54 (31%), Gaps = 2/54 (3%)
Frame = +1
Query: 580 PLXXPXXXXPXTPXIXXPPXXPXPXXXXXXXXVPAPAAXXXXTPPXP--RXPPG 735
P P P +P P P P P P PP P R PPG
Sbjct: 217 PSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPG 270
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,579,665
Number of Sequences: 27780
Number of extensions: 217047
Number of successful extensions: 1299
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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