Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_N04
(1285 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.037
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.34
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.60
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 2.4
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 7.4
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.3 bits (75), Expect = 0.037
Identities = 24/107 (22%), Positives = 25/107 (23%)
Frame = +3
Query: 960 PXXXXPPPPXXXXXPXXXXXXPPPXXXXPPXXXXTPXXPXPXPXXXPPXXXXXXXXXXPX 1139
P P P P P P P + P P P PP
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Query: 1140 PPXXXXXPXXXPXXXPPXPXXPXXXPXPXXXXXXTPXXPXXPPPTPP 1280
P P P PP P P P P P PP
Sbjct: 1106 KPSVAVPPVPAPSGAPPVP-KPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Score = 34.3 bits (75), Expect = 0.037
Identities = 27/108 (25%), Positives = 28/108 (25%), Gaps = 1/108 (0%)
Frame = +3
Query: 960 PXXXXPPPPXXXXXPXXXXXXPPPXXXXPPXXXXTPXXPXPXPXXXPPXXXXXXXXXXPX 1139
P PP P P P P PP + P P P P P
Sbjct: 1126 PSVAAPPVPVPSGAPPV----PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPV 1181
Query: 1140 P-PXXXXXPXXXPXXXPPXPXXPXXXPXPXXXXXXTPXXPXXPPPTPP 1280
P P P P PP P P P P P PP
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVP-PVPPPSTAPPVPTPSAGLPP 1228
Score = 31.9 bits (69), Expect = 0.20
Identities = 24/103 (23%), Positives = 25/103 (24%), Gaps = 2/103 (1%)
Frame = +3
Query: 975 PPPPXXXXXPXXXXXXPPPXXXXPPXXXXTPXXPXPXPXXXPPXXXXXXXXXXPXPPXXX 1154
P P P P PP + P P P P P P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG 1119
Query: 1155 XXPXXXP-XXXPPXPXXPXXXPXPXXXXXXTP-XXPXXPPPTP 1277
P P PP P P P P P PP P
Sbjct: 1120 APPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Score = 31.9 bits (69), Expect = 0.20
Identities = 25/108 (23%), Positives = 26/108 (24%), Gaps = 6/108 (5%)
Frame = +3
Query: 975 PPPPXXXXXPXXXXXXPP---PXXXXPPXXXXTPXXPXPXPXXXPPXXXXXXXXXXPXPP 1145
P P P PP P PP + P P P P P
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Query: 1146 XXXXXPXXXPXXXPPXP---XXPXXXPXPXXXXXXTPXXPXXPPPTPP 1280
P P PP P P P P PP PP
Sbjct: 1146 SVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 29.9 bits (64), Expect = 0.79
Identities = 26/110 (23%), Positives = 27/110 (24%), Gaps = 3/110 (2%)
Frame = +3
Query: 960 PXXXXPPPPXXXXXPXXXXXXPPPXXXXPPXXXXTPXXPXPXP-XXXPPXXXXXXXXXXP 1136
P PP P P P P PP + P P P PP P
Sbjct: 1107 PSVAVPPVPAPSGAPPV----PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Query: 1137 XPPXXXXXPXXXPXXXPPXPXXPXXXP--XPXXXXXXTPXXPXXPPPTPP 1280
P PP P P P P PP PP
Sbjct: 1163 KPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/79 (22%), Positives = 18/79 (22%)
Frame = +1
Query: 985 PXXPXSPXXXXPXPPXXXXXPPXXPXPPXXXPXXPXXXXPXXXXXXXXXXPXPPXXXXXX 1164
P P P P PP P P P P PP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Query: 1165 XXTPXXXXPPXXXPXLXXP 1221
TP PP P P
Sbjct: 1219 VPTPSAGLPPVPVPTAKAP 1237
Score = 29.1 bits (62), Expect = 1.4
Identities = 19/86 (22%), Positives = 19/86 (22%)
Frame = +3
Query: 1023 PPPXXXXPPXXXXTPXXPXPXPXXXPPXXXXXXXXXXPXPPXXXXXPXXXPXXXPPXPXX 1202
P P P P P P P P PP P P P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Query: 1203 PXXXPXPXXXXXXTPXXPXXPPPTPP 1280
P P P P PP
Sbjct: 1213 PSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 28.7 bits (61), Expect = 1.8
Identities = 23/103 (22%), Positives = 24/103 (23%), Gaps = 2/103 (1%)
Frame = +3
Query: 975 PPPPXXXXXPXXXXXXPPPXXXXPPXXXXTPXXPX-PXPXXXPPXXXXXXXXXXPXPPXX 1151
PP P P PP + P P P PP P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVA 1100
Query: 1152 XXXPXXXPXXXPPXPXXPXXXPXPXXXXXXTP-XXPXXPPPTP 1277
PP P P P P P PP P
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Score = 28.3 bits (60), Expect = 2.4
Identities = 21/101 (20%), Positives = 23/101 (22%)
Frame = +1
Query: 979 PXPXXPXSPXXXXPXPPXXXXXPPXXPXPPXXXPXXPXXXXPXXXXXXXXXXPXPPXXXX 1158
P P +P P P P P P P P P P
Sbjct: 999 PVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSG 1058
Query: 1159 XXXXTPXXXXPPXXXPXLXXPXXXXXXXHPXXPXXPPXPPP 1281
P P P + P P PP P P
Sbjct: 1059 APSAPPPVPAPSSEIPSIPAPSGAPPV--PAPSGIPPVPKP 1097
Score = 27.5 bits (58), Expect = 4.2
Identities = 24/101 (23%), Positives = 24/101 (23%), Gaps = 2/101 (1%)
Frame = +1
Query: 985 PXXPXSPXXXXPXPPXXXXXPPXXPXPPXXXPXXPXXXX--PXXXXXXXXXXPXPPXXXX 1158
P P P P P PP P P P P P P PP
Sbjct: 1140 PPVP-KPSVAAPPVPAPSGAPPV-PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEA 1197
Query: 1159 XXXXTPXXXXPPXXXPXLXXPXXXXXXXHPXXPXXPPXPPP 1281
P PP P P P P PP
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 26.6 bits (56), Expect = 7.4
Identities = 25/112 (22%), Positives = 27/112 (24%), Gaps = 1/112 (0%)
Frame = +1
Query: 949 PXXXPXXXXXPXPXXPXSPXXXXPXPPXXXXXPPXXPXPPXXXPXX-PXXXXPXXXXXXX 1125
P P P P +P P P PP P P P P P
Sbjct: 1122 PVPKPSVAAPPVPVPSGAP----PVPKPSVAAPPV-PAPSGAPPVPKPSVAAPPVPAPSS 1176
Query: 1126 XXXPXPPXXXXXXXXTPXXXXPPXXXPXLXXPXXXXXXXHPXXPXXPPXPPP 1281
P P P PP P + P P P PP
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.34
Identities = 27/112 (24%), Positives = 28/112 (25%), Gaps = 6/112 (5%)
Frame = +3
Query: 960 PXXXXPPPPXXXXXPXXXXXXPPPXXXX------PPXXXXTPXXPXPXPXXXPPXXXXXX 1121
P PPP PPP PP + P P PP
Sbjct: 370 PSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPT--PPSLPPSA 427
Query: 1122 XXXXPXPPXXXXXPXXXPXXXPPXPXXPXXXPXPXXXXXXTPXXPXXPPPTP 1277
P P P P P P P P P P P P P P
Sbjct: 428 PPSLP-PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 26.2 bits (55), Expect = 9.8
Identities = 13/47 (27%), Positives = 13/47 (27%)
Frame = +2
Query: 950 PXXXPXXXPXPXPXXPXPXXXXXPXPPXXXXPPXXXPXPPXXXPXPP 1090
P P P P P P PP P P P PP
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.3 bits (65), Expect = 0.60
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
Frame = +3
Query: 1134 PXPPXXXXXPXXXPXXXPPXPXXPXXX--PXPXXXXXXTPXXPXXPPPTPP 1280
P PP P P P P P P P P PPP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +3
Query: 1173 PXXXPPXPXXPXXXPXPXXXXXXTPXXPXXPPPTPP 1280
P PP P P P P PPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 27.5 bits (58), Expect = 4.2
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +3
Query: 1023 PPPXXXXPPXXXXTPXXPXPXPXXXPPXXXXXXXXXXPXPPXXXXXPXXXPXXXPP 1190
PPP PP P P P P PP P PP P PP
Sbjct: 732 PPP----PPPAVIVPT-PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.5 bits (58), Expect = 4.2
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 962 PXXXPXPXPXXPXPXXXXXPXPPXXXXPPXXXPXPPXXXPXPP 1090
P P P P P P PP P PP P PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGP-PPPPPPPGVAGAGPPPPPPPPP 783
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 2.4
Identities = 23/85 (27%), Positives = 23/85 (27%)
Frame = +3
Query: 1026 PPXXXXPPXXXXTPXXPXPXPXXXPPXXXXXXXXXXPXPPXXXXXPXXXPXXXPPXPXXP 1205
PP PP TP P PP PP P P PP P
Sbjct: 124 PPSAPAPP----TPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPI-PSSLPP----P 174
Query: 1206 XXXPXPXXXXXXTPXXPXXPPPTPP 1280
P P P PP PP
Sbjct: 175 AQPAAPVKSPPSAPSLPSAVPPMPP 199
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 7.4
Identities = 15/61 (24%), Positives = 15/61 (24%)
Frame = +3
Query: 960 PXXXXPPPPXXXXXPXXXXXXPPPXXXXPPXXXXTPXXPXPXPXXXPPXXXXXXXXXXPX 1139
P P P P PPP P P P P PP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Query: 1140 P 1142
P
Sbjct: 1746 P 1746
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,927,415
Number of Sequences: 5004
Number of extensions: 24684
Number of successful extensions: 176
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 102
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 699486656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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