Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_M10
         (806 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    33   0.27 
12_02_1174 - 26696869-26698191                                         31   0.82 

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 26/133 (19%), Positives = 31/133 (23%)
 Frame = +2

Query: 401 PXXXPXXXLPXSPXXPXPXXXAXPXXXPXXXPXXGXXXXSXXXPXXXSXXPXXPPXXXLX 580
           P   P    P  P  P P         P   P           P      P   P   + 
Sbjct: 559 PAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVP 618

Query: 581 PXPGPXRXLXSXGXXPSPXXXXXPXXXPRGXXXXLXXPXVXXPXPSXXXPXGAPXXXVXX 760
           P P P   L +    P P     P   P         P +    P+   P   P      
Sbjct: 619 PPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPPRSSSRT 678

Query: 761 XAXSVXXPXGGPP 799
              +     G PP
Sbjct: 679 PTGAATSSKGPPP 691


>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 30/133 (22%), Positives = 32/133 (24%)
 Frame = +2

Query: 401 PXXXPXXXLPXSPXXPXPXXXAXPXXXPXXXPXXGXXXXSXXXPXXXSXXPXXPPXXXLX 580
           P   P    P  P  P P     P   P   P       S   P         PP     
Sbjct: 150 PSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPK 209

Query: 581 PXPGPXRXLXSXGXXPSPXXXXXPXXXPRGXXXXLXXPXVXXPXPSXXXPXGAPXXXVXX 760
           P P P     S    P P     P   P G    +  P    P P    P   P      
Sbjct: 210 PQPPPTLPPPS----PPPPPPTVPPRTP-GDTPAVVEPKPQPPPPPPRAPVKMPRVLEPK 264

Query: 761 XAXSVXXPXGGPP 799
            +     P   PP
Sbjct: 265 PSPPPPSPLPPPP 277


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,021,142
Number of Sequences: 37544
Number of extensions: 120842
Number of successful extensions: 302
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 300
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)