Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_M09
         (795 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U95760-1|AAB54001.1| 1547|Drosophila melanogaster Sno protein.         29   5.5  
AE014298-1863|AAF48240.1| 1547|Drosophila melanogaster CG1903-PB...    29   5.5  

>U95760-1|AAB54001.1| 1547|Drosophila melanogaster Sno protein.
          Length = 1547

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -1

Query: 111 QRAGSDSDLSDFNPFRGGSDSD 46
           QR+ +    SDFNPF  GSDSD
Sbjct: 873 QRSVASDASSDFNPFFSGSDSD 894


>AE014298-1863|AAF48240.1| 1547|Drosophila melanogaster CG1903-PB,
           isoform B protein.
          Length = 1547

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -1

Query: 111 QRAGSDSDLSDFNPFRGGSDSD 46
           QR+ +    SDFNPF  GSDSD
Sbjct: 873 QRSVASDASSDFNPFFSGSDSD 894


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.147    0.480 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,601,178
Number of Sequences: 53049
Number of extensions: 149682
Number of successful extensions: 277
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)