Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_M07
         (725 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC22G7.01c ||SPAPJ696.03c|aminopeptidase |Schizosaccharomyces ...    65   1e-11
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos...    29   0.68 
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M...    27   2.7  
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces...    26   4.8  
SPBC16D10.01c ||SPBC418.03c|conserved fungal protein|Schizosacch...    26   6.3  

>SPAC22G7.01c ||SPAPJ696.03c|aminopeptidase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 598

 Score = 64.9 bits (151), Expect = 1e-11
 Identities = 39/115 (33%), Positives = 56/115 (48%)
 Frame = -1

Query: 473 EXGQILSNEPGXYKVGEYGIRHEDXIEIVAVDKGSDHPKAKNLRGDYDGRGVSGFSTLTL 294
           + G + SNEPG Y+ G +G R E+ + I  V          N    + GR   G   LTL
Sbjct: 498 QAGMVTSNEPGFYEDGHFGYRVENCVYITEV----------NTENRFAGRTYLGLKDLTL 547

Query: 293 VPNQRECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGLLKDLEWLEGQCIPI 129
            P+ ++ ID  +L+  E+ Y+N YH  V  TLSP+L     +   +WL     PI
Sbjct: 548 APHCQKLIDPSLLSPEEVKYLNEYHSEVYTTLSPMLS----VSAKKWLSKHTSPI 598


>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1649

 Score = 29.1 bits (62), Expect = 0.68
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -1

Query: 299 TLVPNQRECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGLLKDLEWL 150
           TL+  Q   +D  +L   E   ++    ++L  L+P   E+  LK LEWL
Sbjct: 68  TLLGEQSVQVDRVLLNRTENEKIDLECVQILRLLAPFFTEKNALKVLEWL 117


>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 309

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 14/45 (31%), Positives = 14/45 (31%)
 Frame = +3

Query: 498 PXKTPXGPPXPLXXWXXPXTXPXPXXXPPPXGXXPXXXXXXPXXP 632
           P   P  PP PL       T   P    PP G  P      P  P
Sbjct: 195 PPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESPKFP 239


>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 451

 Score = 26.2 bits (55), Expect = 4.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 473 EXGQILSNEPGXYKVGEYGIRHEDXI 396
           + G + + EPG Y   E GIR ED +
Sbjct: 406 QKGNVFTVEPGIYIPDEIGIRIEDAV 431


>SPBC16D10.01c ||SPBC418.03c|conserved fungal
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 336

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 18/88 (20%), Positives = 41/88 (46%)
 Frame = -1

Query: 398 IEIVAVDKGSDHPKAKNLRGDYDGRGVSGFSTLTLVPNQRECIDAEILTDFEISYVNAYH 219
           +E + +DKG D    K ++G Y        + L + P+  E  + E+ T   +  ++A +
Sbjct: 105 LERLLIDKGEDADLKKKIQGAYCSIAELFMTDLCMQPDAEE--NCELYTKLALQ-IDATN 161

Query: 218 RRVLDTLSPILKERGLLKDLEWLEGQCI 135
              L TL+ +   +  +++ +    +C+
Sbjct: 162 AEALQTLASMRISQQKIEEAKDALSKCL 189


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,172,773
Number of Sequences: 5004
Number of extensions: 40390
Number of successful extensions: 112
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)