Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_M07
(725 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0747 - 5724586-5724648,5725229-5725309,5725564-5725656,572... 65 5e-11
11_05_0099 - 19044772-19044837,19044896-19045051,19045529-190456... 57 1e-08
06_03_1033 - 27035977-27036144,27036420-27036544,27036695-270367... 57 1e-08
11_05_0100 - 19056465-19056470,19057043-19057276,19058391-190585... 55 7e-08
07_01_0080 + 587674-588510 30 2.2
07_01_0130 - 963856-965454 29 3.8
02_02_0547 + 11399769-11399852,11399906-11400088,11400474-114005... 29 3.8
01_06_0685 - 31218716-31218873,31218974-31219266,31219366-312195... 29 5.0
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 28 8.7
>07_01_0747 -
5724586-5724648,5725229-5725309,5725564-5725656,
5725775-5725929,5726023-5726131,5726291-5726481,
5727463-5727614,5728453-5728728,5729415-5729587,
5730023-5730298,5730839-5730958,5731051-5731176,
5731629-5731970
Length = 718
Score = 65.3 bits (152), Expect = 5e-11
Identities = 38/115 (33%), Positives = 58/115 (50%)
Frame = -1
Query: 473 EXGQILSNEPGXYKVGEYGIRHEDXIEIVAVDKGSDHPKAKNLRGDYDGRGVSGFSTLTL 294
+ G I+SNEPG Y+ +GIR E+ + + K NL + G GF LT
Sbjct: 618 QKGMIVSNEPGYYEDNSFGIRIENLLLV----------KEVNLPNSFGGVSYLGFEKLTF 667
Query: 293 VPNQRECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGLLKDLEWLEGQCIPI 129
VP Q + +D +L+ EI+++N YH V + +SP+L L+WL P+
Sbjct: 668 VPIQSKLVDLSLLSPSEINWINEYHDEVWEKVSPLLSGH----SLDWLRKNTRPL 718
>11_05_0099 -
19044772-19044837,19044896-19045051,19045529-19045653,
19045773-19045844,19045947-19046051,19046509-19046563,
19047334-19047414,19047499-19047633,19048279-19048342,
19048844-19048911,19049082-19049168,19050247-19050501,
19050616-19050738,19050866-19051150,19051712-19051851,
19052385-19052445,19052537-19052637,19052807-19052870,
19053020-19053127
Length = 716
Score = 57.2 bits (132), Expect = 1e-08
Identities = 36/110 (32%), Positives = 54/110 (49%)
Frame = -1
Query: 458 LSNEPGXYKVGEYGIRHEDXIEIVAVDKGSDHPKAKNLRGDYDGRGVSGFSTLTLVPNQR 279
+++EPG Y+ G +GIR E+ + + K N + ++ +G F +T P Q
Sbjct: 599 VTDEPGYYEDGSFGIRLENVLIV----------KEANTKYNFGDKGYLAFEHITWAPYQT 648
Query: 278 ECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGLLKDLEWLEGQCIPI 129
+ ID +LT EI +VNAYH L P L E ++ EWL PI
Sbjct: 649 KLIDTTLLTPAEIEWVNAYHADCRKILQPYLNE----QEKEWLRKATEPI 694
>06_03_1033 -
27035977-27036144,27036420-27036544,27036695-27036766,
27036872-27036976,27037513-27037567,27038196-27038276,
27039109-27039159,27039531-27039594,27040783-27040850,
27040993-27041079,27041401-27041655,27041768-27041890,
27042013-27042297,27042948-27043087,27043696-27043759,
27043929-27044048
Length = 620
Score = 57.2 bits (132), Expect = 1e-08
Identities = 36/110 (32%), Positives = 54/110 (49%)
Frame = -1
Query: 458 LSNEPGXYKVGEYGIRHEDXIEIVAVDKGSDHPKAKNLRGDYDGRGVSGFSTLTLVPNQR 279
+++EPG Y+ G +GIR E+ + + K N + ++ +G F +T P Q
Sbjct: 521 VTDEPGYYEDGSFGIRLENVLIV----------KEANTKFNFGDKGYLAFEHITWTPYQT 570
Query: 278 ECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGLLKDLEWLEGQCIPI 129
+ ID +LT EI +VNAYH L P L E ++ EWL PI
Sbjct: 571 KLIDTTLLTPAEIEWVNAYHSDCRKILQPYLNE----QEKEWLRKATEPI 616
>11_05_0100 -
19056465-19056470,19057043-19057276,19058391-19058546,
19059639-19059763,19059912-19059983,19060080-19060184,
19060691-19060745,19061576-19061656,19062806-19062869,
19064715-19064782,19064947-19065033,19066121-19066285,
19066310-19066429,19066485-19066607,19066738-19067019,
19067936-19068075,19068234-19068335,19068802-19068874,
19069061-19069171
Length = 722
Score = 54.8 bits (126), Expect = 7e-08
Identities = 35/111 (31%), Positives = 54/111 (48%)
Frame = -1
Query: 458 LSNEPGXYKVGEYGIRHEDXIEIVAVDKGSDHPKAKNLRGDYDGRGVSGFSTLTLVPNQR 279
+++EPG Y+ G +GIR E+ + + + N + ++ +G F +T P Q
Sbjct: 547 VTDEPGYYQDGSFGIRLENVLIV----------QDANTKFNFGDKGYLAFEHITWAPYQT 596
Query: 278 ECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGLLKDLEWLEGQCIPIT 126
+ IDA +L EI +VN YH L P L E ++ EWL PIT
Sbjct: 597 KLIDATLLAPAEIEWVNTYHSDCRRILQPYLNE----QEKEWLRKATEPIT 643
>07_01_0080 + 587674-588510
Length = 278
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +3
Query: 477 PXSSGXGPXKTPXGPPXPLXXWXXPXTXPXPXXXPPPXGXXP 602
P G G + P PP P P P P PPP P
Sbjct: 80 PRLGGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPPPPPPPP 121
>07_01_0130 - 963856-965454
Length = 532
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -1
Query: 203 TLSPILKERGLLKDLEWLEGQCIPITRK*TLKKLGSLVQQICKIWFLCESER 48
T S L RGL D E L+ +C+PI +K T+ + ++ C++ E ++
Sbjct: 416 TRSYFLLRRGLGDDFE-LKTKCVPIPKKNTVVQQYCVISDYCRVGVAHEEDQ 466
>02_02_0547 +
11399769-11399852,11399906-11400088,11400474-11400578,
11400690-11400773,11400938-11401053,11401158-11401259,
11401339-11401452,11401540-11401596,11401681-11401873,
11402261-11402335,11402425-11402460,11402509-11402574,
11402575-11402688
Length = 442
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = -1
Query: 491 PRRSWXEXGQILSNEPGXYKVGEYGIRHEDXIEIVAVDKGSDHPKAKNLRGDYDGR 324
PRR W + + LS+EP GI + I+ AV K SD K + YDGR
Sbjct: 115 PRRLWGDPSEDLSSEPRYLVTFTVGITQKANID-AAVKKFSD--KFTIMLFHYDGR 167
>01_06_0685 -
31218716-31218873,31218974-31219266,31219366-31219559,
31219666-31220409,31221504-31221824
Length = 569
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 479 WXEXGQILSNEPGXYKVGEYGIRH 408
W + G L N PG + +G+YG RH
Sbjct: 106 WLD-GTYLRNGPGLWNLGDYGFRH 128
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +3
Query: 498 PXKTPXGPPXPLXXWXXPXTXPXPXXXPPPXGXXP 602
P TP PP P+ P P P PP P
Sbjct: 147 PTPTPTRPPVPVWAAPLPARTPTPTPSAPPRAAAP 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,036,976
Number of Sequences: 37544
Number of extensions: 288646
Number of successful extensions: 797
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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