Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_M07
         (725 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039716-4|AAB96739.1|  616|Caenorhabditis elegans Aminopeptidas...    68   6e-12
AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical ...    64   1e-10
AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical...    30   1.9  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    28   7.8  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    28   7.8  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    28   7.8  

>AF039716-4|AAB96739.1|  616|Caenorhabditis elegans Aminopeptidase p
           protein 1 protein.
          Length = 616

 Score = 68.1 bits (159), Expect = 6e-12
 Identities = 45/123 (36%), Positives = 62/123 (50%)
 Frame = -1

Query: 497 SXPRRSWXEXGQILSNEPGXYKVGEYGIRHEDXIEIVAVDKGSDHPKAKNLRGDYDGRGV 318
           S P        Q+L+ EPG Y   +YGIR E+  E V     S   KA+N          
Sbjct: 506 SVPTGGELHASQVLTIEPGFYAKEKYGIRIENCYETVEAVVMS---KAQNFLT------- 555

Query: 317 SGFSTLTLVPNQRECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGLLKDLEWLEGQC 138
             F +LTLVP Q   +D  +L + EI+++N YH RVL  +   L++RG   +L+WL   C
Sbjct: 556 --FKSLTLVPIQTSIVDKSLLIEEEINWLNQYHARVLKEVGEHLQKRGKTDELKWLAEAC 613

Query: 137 IPI 129
            PI
Sbjct: 614 KPI 616


>AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical
            protein Y45G5AM.2 protein.
          Length = 1061

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 38/115 (33%), Positives = 59/115 (51%)
 Frame = -1

Query: 473  EXGQILSNEPGXYKVGEYGIRHEDXIEIVAVDKGSDHPKAKNLRGDYDGRGVSGFSTLTL 294
            E GQ+++ EPG Y  G YGIR  +  E V V    +          Y  R    F  LTL
Sbjct: 959  EAGQVMTIEPGYYSEGMYGIRIGNCYETVDVTLSQND--------QYFLR----FEPLTL 1006

Query: 293  VPNQRECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGLLKDLEWLEGQCIPI 129
            +P Q   ++ ++LT  EI+++N YH +V   +  IL++   +++ +WL   C PI
Sbjct: 1007 IPIQTSIVNKDLLTSEEINWLNKYHFKVFSKIGYILRKENRMEEYDWLFNACQPI 1061


>AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical
            protein Y47D3A.29 protein.
          Length = 1428

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -1

Query: 434  KVGEYGIRHEDXIEIVAVDKGSDHP 360
            K G++ +RH D +E V  + G+D+P
Sbjct: 1128 KSGKFNLRHNDIVEYVICEDGTDNP 1152


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/39 (33%), Positives = 13/39 (33%)
 Frame = +3

Query: 516 GPPXPLXXWXXPXTXPXPXXXPPPXGXXPXXXXXXPXXP 632
           GPP P      P     P   PPP G  P      P  P
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/39 (33%), Positives = 13/39 (33%)
 Frame = +3

Query: 516 GPPXPLXXWXXPXTXPXPXXXPPPXGXXPXXXXXXPXXP 632
           GPP P      P     P   PPP G  P      P  P
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/39 (33%), Positives = 13/39 (33%)
 Frame = +3

Query: 516 GPPXPLXXWXXPXTXPXPXXXPPPXGXXPXXXXXXPXXP 632
           GPP P      P     P   PPP G  P      P  P
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,296,299
Number of Sequences: 27780
Number of extensions: 238867
Number of successful extensions: 692
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)