Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_M02
         (750 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0130 - 963856-965454                                             30   2.3  
09_06_0249 - 21853325-21853484,21853523-21853902,21854012-21854185     28   6.9  

>07_01_0130 - 963856-965454
          Length = 532

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = -1

Query: 267 KQTHYSEY*YSHDNFKLRLYASFLRKIYHRMNDRIKSLMNLSEFKTRDQNRFPIGA--HG 94
           +Q  Y  Y Y  D+F  R   +   +I    ND++   + LS+F +  + R PIG   HG
Sbjct: 83  RQDMYRGY-YILDSF--RFPEAHEEEIMSENNDKVSYSLALSKFNSAKRARIPIGTRRHG 139

Query: 93  VRGQ 82
            RG+
Sbjct: 140 DRGE 143


>09_06_0249 - 21853325-21853484,21853523-21853902,21854012-21854185
          Length = 237

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 17/61 (27%), Positives = 26/61 (42%)
 Frame = -2

Query: 644 RRIEVRSLRPRMXLFLXXYMSYGLRXRRFVYETWSRLSIGRHFLSTVVIDATNANHSSFD 465
           RR+E     PR+ L L   +S   R   F+   W    + RH L+    D ++ +    D
Sbjct: 111 RRVESLERGPRLHLSLIVEVSRADRVLGFICSAWHDELVVRHVLTLRDADGSSTSSGGRD 170

Query: 464 F 462
           F
Sbjct: 171 F 171


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,481,459
Number of Sequences: 37544
Number of extensions: 291791
Number of successful extensions: 544
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 544
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)