Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_L19
(720 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 178 3e-45
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 178 3e-45
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 178 3e-45
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 178 3e-45
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 178 3e-45
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 178 3e-45
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 178 3e-45
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 178 3e-45
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 178 3e-45
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 172 2e-43
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 169 2e-42
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 96 3e-20
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 93 2e-19
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 71 6e-13
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 59 4e-09
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 39 0.004
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 39 0.004
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.63
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.63
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.63
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 7.7
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 7.7
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 7.7
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 178 bits (434), Expect = 3e-45
Identities = 93/122 (76%), Positives = 98/122 (80%), Gaps = 4/122 (3%)
Frame = -3
Query: 679 PXAFFQPSFXGYGSXR-HPRXHX*LHH---EVRRGHP*DLNANTVLSGGTTMYPGIADRM 512
P A FQPSF G S H + + ++R+ DL ANTVLSGGTTMYPGIADRM
Sbjct: 259 PEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRK----DLYANTVLSGGTTMYPGIADRM 314
Query: 511 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVHRK 332
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 331 CF 326
CF
Sbjct: 375 CF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 178 bits (434), Expect = 3e-45
Identities = 93/122 (76%), Positives = 98/122 (80%), Gaps = 4/122 (3%)
Frame = -3
Query: 679 PXAFFQPSFXGYGSXR-HPRXHX*LHH---EVRRGHP*DLNANTVLSGGTTMYPGIADRM 512
P A FQPSF G S H + + ++R+ DL ANTVLSGGTTMYPGIADRM
Sbjct: 259 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRK----DLYANTVLSGGTTMYPGIADRM 314
Query: 511 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVHRK 332
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 331 CF 326
CF
Sbjct: 375 CF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 178 bits (434), Expect = 3e-45
Identities = 93/122 (76%), Positives = 98/122 (80%), Gaps = 4/122 (3%)
Frame = -3
Query: 679 PXAFFQPSFXGYGSXR-HPRXHX*LHH---EVRRGHP*DLNANTVLSGGTTMYPGIADRM 512
P A FQPSF G S H + + ++R+ DL ANTVLSGGTTMYPGIADRM
Sbjct: 259 PEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRK----DLYANTVLSGGTTMYPGIADRM 314
Query: 511 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVHRK 332
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 331 CF 326
CF
Sbjct: 375 CF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 178 bits (434), Expect = 3e-45
Identities = 93/122 (76%), Positives = 98/122 (80%), Gaps = 4/122 (3%)
Frame = -3
Query: 679 PXAFFQPSFXGYGSXR-HPRXHX*LHH---EVRRGHP*DLNANTVLSGGTTMYPGIADRM 512
P A FQPSF G S H + + ++R+ DL ANTVLSGGTTMYPGIADRM
Sbjct: 259 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRK----DLYANTVLSGGTTMYPGIADRM 314
Query: 511 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVHRK 332
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 331 CF 326
CF
Sbjct: 375 CF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 178 bits (434), Expect = 3e-45
Identities = 93/122 (76%), Positives = 98/122 (80%), Gaps = 4/122 (3%)
Frame = -3
Query: 679 PXAFFQPSFXGYGSXR-HPRXHX*LHH---EVRRGHP*DLNANTVLSGGTTMYPGIADRM 512
P A FQPSF G S H + + ++R+ DL ANTVLSGGTTMYPGIADRM
Sbjct: 259 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRK----DLYANTVLSGGTTMYPGIADRM 314
Query: 511 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVHRK 332
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 331 CF 326
CF
Sbjct: 375 CF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 178 bits (434), Expect = 3e-45
Identities = 93/122 (76%), Positives = 98/122 (80%), Gaps = 4/122 (3%)
Frame = -3
Query: 679 PXAFFQPSFXGYGSXR-HPRXHX*LHH---EVRRGHP*DLNANTVLSGGTTMYPGIADRM 512
P A FQPSF G S H + + ++R+ DL ANTVLSGGTTMYPGIADRM
Sbjct: 259 PEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRK----DLYANTVLSGGTTMYPGIADRM 314
Query: 511 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVHRK 332
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 331 CF 326
CF
Sbjct: 375 CF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 178 bits (434), Expect = 3e-45
Identities = 93/122 (76%), Positives = 98/122 (80%), Gaps = 4/122 (3%)
Frame = -3
Query: 679 PXAFFQPSFXGYGSXR-HPRXHX*LHH---EVRRGHP*DLNANTVLSGGTTMYPGIADRM 512
P A FQPSF G S H + + ++R+ DL ANTVLSGGTTMYPGIADRM
Sbjct: 215 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRK----DLYANTVLSGGTTMYPGIADRM 270
Query: 511 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVHRK 332
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVHRK
Sbjct: 271 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 330
Query: 331 CF 326
CF
Sbjct: 331 CF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 178 bits (434), Expect = 3e-45
Identities = 93/122 (76%), Positives = 98/122 (80%), Gaps = 4/122 (3%)
Frame = -3
Query: 679 PXAFFQPSFXGYGSXR-HPRXHX*LHH---EVRRGHP*DLNANTVLSGGTTMYPGIADRM 512
P A FQPSF G S H + + ++R+ DL ANTVLSGGTTMYPGIADRM
Sbjct: 245 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRK----DLYANTVLSGGTTMYPGIADRM 300
Query: 511 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVHRK 332
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVHRK
Sbjct: 301 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 360
Query: 331 CF 326
CF
Sbjct: 361 CF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 178 bits (434), Expect = 3e-45
Identities = 93/122 (76%), Positives = 98/122 (80%), Gaps = 4/122 (3%)
Frame = -3
Query: 679 PXAFFQPSFXGYGSXR-HPRXHX*LHH---EVRRGHP*DLNANTVLSGGTTMYPGIADRM 512
P A FQPSF G S H + + ++R+ DL ANTVLSGGTTMYPGIADRM
Sbjct: 259 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRK----DLYANTVLSGGTTMYPGIADRM 314
Query: 511 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVHRK 332
QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 331 CF 326
CF
Sbjct: 375 CF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 172 bits (419), Expect = 2e-43
Identities = 92/122 (75%), Positives = 97/122 (79%), Gaps = 4/122 (3%)
Frame = -3
Query: 679 PXAFFQPSFXGYGSXR-HPRXHX*LHH---EVRRGHP*DLNANTVLSGGTTMYPGIADRM 512
P A FQPSF G S H + + ++R+ DL ANTVLSGGTTMYPGIADRM
Sbjct: 259 PEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRK----DLYANTVLSGGTTMYPGIADRM 314
Query: 511 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVHRK 332
QKEITALAP TMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 373
Query: 331 CF 326
CF
Sbjct: 374 CF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 169 bits (411), Expect = 2e-42
Identities = 87/122 (71%), Positives = 96/122 (78%), Gaps = 4/122 (3%)
Frame = -3
Query: 679 PXAFFQPSFXGY-GSXRHPRXHX*LHH---EVRRGHP*DLNANTVLSGGTTMYPGIADRM 512
P FQP+F G G+ H + + ++R+ DL ANTVLSGGT+M+PGIADRM
Sbjct: 258 PEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRK----DLYANTVLSGGTSMFPGIADRM 313
Query: 511 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVHRK 332
QKEI LAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVHRK
Sbjct: 314 QKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 373
Query: 331 CF 326
CF
Sbjct: 374 CF 375
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 95.9 bits (228), Expect = 3e-20
Identities = 43/85 (50%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Frame = -3
Query: 574 LNANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASL 404
L +N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL
Sbjct: 351 LFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSL 410
Query: 403 XTFQQMWISKQEYDESGPSIVHRKC 329
TFQQMW+SK EYDESG SIV +KC
Sbjct: 411 GTFQQMWVSKAEYDESGKSIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/83 (49%), Positives = 59/83 (71%)
Frame = -3
Query: 574 LNANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTF 395
L +N VLSGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF
Sbjct: 292 LYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTF 351
Query: 394 QQMWISKQEYDESGPSIVHRKCF 326
++MW+ K+EY++ G S +H++ F
Sbjct: 352 RKMWLGKKEYEDMGASAMHKRFF 374
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1
Query: 681 PXXLFSNPRXWGMEAXGIHXXTXNSIMKCDVDIRK 577
P LF P G E G+ SIMKCDVD+R+
Sbjct: 257 PEVLFK-PDLIGTEWPGMAHVVNQSIMKCDVDLRQ 290
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 71.3 bits (167), Expect = 6e-13
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 13/88 (14%)
Frame = -3
Query: 577 DLNANTVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVW 431
D + VLSGGTTMYPG+ R++KE+ L A KI+I APP RK+ V+
Sbjct: 296 DFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVF 355
Query: 430 IGGSILASL--XTFQQMWISKQEYDESG 353
+GG++LA+L Q W+SK+EY+E G
Sbjct: 356 LGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 58.8 bits (136), Expect = 4e-09
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 16/102 (15%)
Frame = -3
Query: 601 EVRRGHP*DLNANTVLSGGTTMYPGIADRMQKEITALA----------------PSTMKI 470
+VRRG L N VLSGG+TM+ A ++Q+++ L+ P + +
Sbjct: 317 DVRRG----LYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDV 372
Query: 469 KIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSI 344
++I+ ++Y+VW GGS+LAS F Q+ +K EY E GPSI
Sbjct: 373 QVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/69 (33%), Positives = 44/69 (63%)
Frame = -3
Query: 574 LNANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTF 395
L N L+GG ++ PGIA+++++E++ + P+T+ ++ P R + ++G I+AS TF
Sbjct: 471 LYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTF 530
Query: 394 QQMWISKQE 368
+ IS Q+
Sbjct: 531 EDSCISLQQ 539
Score = 32.3 bits (70), Expect = 0.36
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -1
Query: 660 PRXWGMEAXGIHXXTXNSIMKCDVDIRK 577
P+ WG++ G+H +I++C +D R+
Sbjct: 442 PKKWGLDTKGLHQLIHEAILQCPIDSRR 469
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = -3
Query: 574 LNANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASL 404
L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L
Sbjct: 308 LAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--L 363
Query: 403 XTFQQMWISKQEYDESGPSIVHRKCF*T 320
+ WI+++++DE G S+ F T
Sbjct: 364 TASKVPWINRKDWDERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = -3
Query: 574 LNANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASL 404
L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L
Sbjct: 308 LAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--L 363
Query: 403 XTFQQMWISKQEYDESGPSIVHRKCF*T 320
+ WI+++++DE G S+ F T
Sbjct: 364 TASKVPWINRKDWDERGDSLEFSNFFQT 391
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 431 PYGVLPLWRSNDLNLHCRWGESCD 502
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 431 PYGVLPLWRSNDLNLHCRWGESCD 502
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 431 PYGVLPLWRSNDLNLHCRWGESCD 502
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Frame = -3
Query: 565 NTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK----YSVWIGGSIL 413
N +L+GG + PG+ R+++EI + + KI +I E K + W+G S+L
Sbjct: 212 NILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIKNTPLFVSWLGASLL 271
Query: 412 ASL-XTFQQMWISKQEY 365
SL T ++ ++ +E+
Sbjct: 272 GSLRETIERKSLTLEEW 288
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 267 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 359
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 370 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 269
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 267 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 359
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,009,637
Number of Sequences: 27780
Number of extensions: 249368
Number of successful extensions: 554
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 538
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -