Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_L15
         (865 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC103941-1|AAI03942.1|  568|Homo sapiens CPEB2 protein protein.        35   0.33 
BC105925-1|AAI05926.1|  562|Homo sapiens CPEB2 protein protein.        33   1.8  
BC103940-1|AAI03941.1|  589|Homo sapiens cytoplasmic polyadenyla...    33   1.8  
AY255519-1|AAP41553.1|  559|Homo sapiens cytoplasmic polyadenyla...    33   1.8  
AY247744-1|AAP37585.1|  589|Homo sapiens cytoplasmic polyadenyla...    33   1.8  
X72727-1|CAA51267.1|  464|Homo sapiens transformation upregulate...    32   2.3  
S74678-1|AAB20770.1|  463|Homo sapiens heterogeneous nuclear rib...    32   2.3  
CR456771-1|CAG33052.1|  464|Homo sapiens HNRPK protein.                32   2.3  
BC014980-1|AAH14980.1|  463|Homo sapiens heterogeneous nuclear r...    32   2.3  
BC000355-1|AAH00355.1|  464|Homo sapiens heterogeneous nuclear r...    32   2.3  
AY911506-1|AAW84289.1|  464|Homo sapiens heterogeneous nuclear r...    32   2.3  
AL354733-12|CAI16022.1|  379|Homo sapiens heterogeneous nuclear ...    32   2.3  
AL354733-11|CAI16021.1|  464|Homo sapiens heterogeneous nuclear ...    32   2.3  
AL354733-10|CAI16020.1|  463|Homo sapiens heterogeneous nuclear ...    32   2.3  
AL354733-9|CAI16019.1|  428|Homo sapiens heterogeneous nuclear r...    32   2.3  
AL354733-8|CAI16018.1|  306|Homo sapiens heterogeneous nuclear r...    32   2.3  
AB209562-1|BAD92799.1|  442|Homo sapiens heterogeneous nuclear r...    32   2.3  

>BC103941-1|AAI03942.1|  568|Homo sapiens CPEB2 protein protein.
          Length = 568

 Score = 35.1 bits (77), Expect = 0.33
 Identities = 14/23 (60%), Positives = 14/23 (60%)
 Frame = -3

Query: 575 GGGGGGGFFXX*KKXXXPPPPPP 507
           GGGGGGGF         PPPPPP
Sbjct: 45  GGGGGGGFGGPFSATAVPPPPPP 67


>BC105925-1|AAI05926.1|  562|Homo sapiens CPEB2 protein protein.
          Length = 562

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = -3

Query: 572 GGGGGGFFXX*KKXXXPPPPPP 507
           GGGGGGF         PPPPPP
Sbjct: 45  GGGGGGFGGPFSATAVPPPPPP 66


>BC103940-1|AAI03941.1|  589|Homo sapiens cytoplasmic
           polyadenylation element binding protein 2 protein.
          Length = 589

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = -3

Query: 572 GGGGGGFFXX*KKXXXPPPPPP 507
           GGGGGGF         PPPPPP
Sbjct: 45  GGGGGGFGGPFSATAVPPPPPP 66


>AY255519-1|AAP41553.1|  559|Homo sapiens cytoplasmic
           polyadenylation element binding protein CPEB2b protein.
          Length = 559

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = -3

Query: 572 GGGGGGFFXX*KKXXXPPPPPP 507
           GGGGGGF         PPPPPP
Sbjct: 45  GGGGGGFGGPFSATAVPPPPPP 66


>AY247744-1|AAP37585.1|  589|Homo sapiens cytoplasmic
           polyadenylation element binding protein CPEB2 protein.
          Length = 589

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = -3

Query: 572 GGGGGGFFXX*KKXXXPPPPPP 507
           GGGGGGF         PPPPPP
Sbjct: 45  GGGGGGFGGPFSATAVPPPPPP 66


>X72727-1|CAA51267.1|  464|Homo sapiens transformation upregulated
           nuclear protein protein.
          Length = 464

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = -3

Query: 596 PPPXXXXGGGGGGGFFXX*KKXXXPPPPPPXGG 498
           PPP    GG GG       +    PPPPPP GG
Sbjct: 290 PPPPPGRGGRGGSRA----RNLPLPPPPPPRGG 318


>S74678-1|AAB20770.1|  463|Homo sapiens heterogeneous nuclear
           ribonucleoprotein complex K protein.
          Length = 463

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = -3

Query: 596 PPPXXXXGGGGGGGFFXX*KKXXXPPPPPPXGG 498
           PPP    GG GG       +    PPPPPP GG
Sbjct: 290 PPPPPGRGGRGGSRA----RNLPLPPPPPPRGG 318


>CR456771-1|CAG33052.1|  464|Homo sapiens HNRPK protein.
          Length = 464

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = -3

Query: 596 PPPXXXXGGGGGGGFFXX*KKXXXPPPPPPXGG 498
           PPP    GG GG       +    PPPPPP GG
Sbjct: 290 PPPPPGRGGRGGSRA----RNLPLPPPPPPRGG 318


>BC014980-1|AAH14980.1|  463|Homo sapiens heterogeneous nuclear
           ribonucleoprotein K protein.
          Length = 463

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = -3

Query: 596 PPPXXXXGGGGGGGFFXX*KKXXXPPPPPPXGG 498
           PPP    GG GG       +    PPPPPP GG
Sbjct: 290 PPPPPGRGGRGGSRA----RNLPLPPPPPPRGG 318


>BC000355-1|AAH00355.1|  464|Homo sapiens heterogeneous nuclear
           ribonucleoprotein K protein.
          Length = 464

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = -3

Query: 596 PPPXXXXGGGGGGGFFXX*KKXXXPPPPPPXGG 498
           PPP    GG GG       +    PPPPPP GG
Sbjct: 290 PPPPPGRGGRGGSRA----RNLPLPPPPPPRGG 318


>AY911506-1|AAW84289.1|  464|Homo sapiens heterogeneous nuclear
           ribonucleoprotein K transcript variant protein.
          Length = 464

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = -3

Query: 596 PPPXXXXGGGGGGGFFXX*KKXXXPPPPPPXGG 498
           PPP    GG GG       +    PPPPPP GG
Sbjct: 290 PPPPPGRGGRGGSRA----RNLPLPPPPPPRGG 318


>AL354733-12|CAI16022.1|  379|Homo sapiens heterogeneous nuclear
           ribonucleoprotein K protein.
          Length = 379

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = -3

Query: 596 PPPXXXXGGGGGGGFFXX*KKXXXPPPPPPXGG 498
           PPP    GG GG       +    PPPPPP GG
Sbjct: 266 PPPPPGRGGRGGSRA----RNLPLPPPPPPRGG 294


>AL354733-11|CAI16021.1|  464|Homo sapiens heterogeneous nuclear
           ribonucleoprotein K protein.
          Length = 464

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = -3

Query: 596 PPPXXXXGGGGGGGFFXX*KKXXXPPPPPPXGG 498
           PPP    GG GG       +    PPPPPP GG
Sbjct: 290 PPPPPGRGGRGGSRA----RNLPLPPPPPPRGG 318


>AL354733-10|CAI16020.1|  463|Homo sapiens heterogeneous nuclear
           ribonucleoprotein K protein.
          Length = 463

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = -3

Query: 596 PPPXXXXGGGGGGGFFXX*KKXXXPPPPPPXGG 498
           PPP    GG GG       +    PPPPPP GG
Sbjct: 290 PPPPPGRGGRGGSRA----RNLPLPPPPPPRGG 318


>AL354733-9|CAI16019.1|  428|Homo sapiens heterogeneous nuclear
           ribonucleoprotein K protein.
          Length = 428

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = -3

Query: 596 PPPXXXXGGGGGGGFFXX*KKXXXPPPPPPXGG 498
           PPP    GG GG       +    PPPPPP GG
Sbjct: 255 PPPPPGRGGRGGSRA----RNLPLPPPPPPRGG 283


>AL354733-8|CAI16018.1|  306|Homo sapiens heterogeneous nuclear
           ribonucleoprotein K protein.
          Length = 306

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = -3

Query: 596 PPPXXXXGGGGGGGFFXX*KKXXXPPPPPPXGG 498
           PPP    GG GG       +    PPPPPP GG
Sbjct: 221 PPPPPGRGGRGGSRA----RNLPLPPPPPPRGG 249


>AB209562-1|BAD92799.1|  442|Homo sapiens heterogeneous nuclear
           ribonucleoprotein K isoform a variant protein.
          Length = 442

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = -3

Query: 596 PPPXXXXGGGGGGGFFXX*KKXXXPPPPPPXGG 498
           PPP    GG GG       +    PPPPPP GG
Sbjct: 268 PPPPPGRGGRGGSRA----RNLPLPPPPPPRGG 296


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,963,932
Number of Sequences: 237096
Number of extensions: 1685557
Number of successful extensions: 21824
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13259
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)