Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_L15
(865 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 0.045
U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog (hedg... 35 0.065
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 33 0.26
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 27 0.27
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 27 0.27
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 32 0.61
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 31 1.1
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 31 1.1
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 31 1.4
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 2.4
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 30 2.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 7.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 7.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 7.5
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 28 9.9
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 28 9.9
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 575 GGGGGGGFFXX*KKXXXPPPPPPXGGG 495
GGGG GG PPPPP GGG
Sbjct: 38 GGGGCGGGGGCGGGCAPPPPPPACGGG 64
Score = 30.3 bits (65), Expect(2) = 0.045
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 575 GGGGGGGFFXX*KKXXXPPPPPPXGGG 495
GGGG GG PPPPP GGG
Sbjct: 95 GGGGCGGGGGCGGGCAPPPPPPACGGG 121
Score = 24.2 bits (50), Expect(2) = 0.045
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 596 PPPXXXXGGGGGGG 555
PPP G GGGGG
Sbjct: 57 PPPACGGGCGGGGG 70
>U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 8 protein.
Length = 373
Score = 35.1 bits (77), Expect = 0.065
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -3
Query: 575 GGGGGGGFFXX*KKXXXPPPPPPXG 501
GGGG GFF PPPPPP G
Sbjct: 216 GGGGNNGFFVPVPVVIPPPPPPPPG 240
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 33.1 bits (72), Expect = 0.26
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -3
Query: 572 GGGGGGFFXX*KKXXXPPPPPPXGGG 495
GGGGG PPPPPP GGG
Sbjct: 196 GGGGGSGGSGGGSGRFPPPPPPYGGG 221
Score = 31.9 bits (69), Expect = 0.61
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 575 GGGGGGGFFXX*KKXXXPPPPPPXGGG 495
GGGGG G PPPPP GGG
Sbjct: 196 GGGGGSGGSGGGSGRFPPPPPPYGGGG 222
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 26.6 bits (56), Expect(2) = 0.27
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = -2
Query: 600 PPPPXXXXXXXXXXGVFFXXKKKXXPPPPPP 508
PPPP F PPPPPP
Sbjct: 769 PPPPPPHCEPTMVHVEFTPPSTSSVPPPPPP 799
Score = 25.0 bits (52), Expect(2) = 0.27
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 525 PPPPPPXXGG 496
PPPPPP GG
Sbjct: 809 PPPPPPPPGG 818
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 26.6 bits (56), Expect(2) = 0.27
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = -2
Query: 600 PPPPXXXXXXXXXXGVFFXXKKKXXPPPPPP 508
PPPP F PPPPPP
Sbjct: 769 PPPPPPHCEPTMVHVEFTPPSTSSVPPPPPP 799
Score = 25.0 bits (52), Expect(2) = 0.27
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 525 PPPPPPXXGG 496
PPPPPP GG
Sbjct: 809 PPPPPPPPGG 818
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 31.9 bits (69), Expect = 0.61
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -3
Query: 572 GGGGGGFFXX*KKXXXPPPPPPXGGG 495
GGGGGG PPPPPP GGG
Sbjct: 22 GGGGGG-------CCAPPPPPPCGGG 40
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 31.5 bits (68), Expect = 0.80
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 572 GGGGGGFFXX*KKXXXPPPPPP 507
GGGGGG + + PPPPPP
Sbjct: 82 GGGGGGGYGRPQGYVPPPPPPP 103
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3
Query: 575 GGGGGGGFFXX*KKXXXPPPPPP 507
GGGGGGG+ + PPPPPP
Sbjct: 82 GGGGGGGYGR--PQGYVPPPPPP 102
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -3
Query: 596 PPPXXXXGGGGGGGFFXX*KKXXXPPPPPPXGGG 495
PPP GG GGGG PPP P GGG
Sbjct: 50 PPPAPCGGGCGGGGGGCG-GGGGCAPPPAPCGGG 82
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 575 GGGGGGGFFXX*KKXXXPPPPPP 507
G GGGG+ PPPPPP
Sbjct: 288 GSSGGGGYSAPAAAPPPPPPPPP 310
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -3
Query: 596 PPPXXXXGGGGGGGFFXX*KKXXXPPPPPPXGGG 495
PPP GG GGGG PPP P GGG
Sbjct: 50 PPPAPCGGGCGGGGGGCG-GGGGCAPPPAPCGGG 82
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 575 GGGGGGGFFXX*KKXXXPPPPPP 507
G GGGG+ PPPPPP
Sbjct: 288 GSSGGGGYSAPAAAPPPPPPPPP 310
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -3
Query: 572 GGGGGGFFXX*KKXXXPPPPP-PXGGG 495
GGGGG + PPPPP P GGG
Sbjct: 50 GGGGGSYAAAPALPPPPPPPPAPIGGG 76
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -3
Query: 572 GGGGGGFFXX*KKXXXPPPPP-PXGGG 495
GGGGG + PPPPP P GGG
Sbjct: 50 GGGGGSYAAAPALPPPPPPPPAPIGGG 76
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -3
Query: 575 GGGGGGGFFXX*KKXXXPPPPPPXGGG 495
GGGGGGG PPPPPP GG
Sbjct: 34 GGGGGGG------GCCAPPPPPPVCGG 54
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 575 GGGGGGGFFXX*KKXXXPPPPPPXG 501
GGGGGGG PPPPP G
Sbjct: 24 GGGGGGGGCAPAAPACAPPPPPMCG 48
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 10/37 (27%)
Frame = -3
Query: 575 GGGGGGGF----------FXX*KKXXXPPPPPPXGGG 495
GGGGGGG F PPPPPP GGG
Sbjct: 37 GGGGGGGCLPTLGCSVISFNVPTLKLPPPPPPPCGGG 73
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -3
Query: 131 PKGFXPPPXFXKGNSPX*XGGAPKXV*XGGXPP 33
P G PPP KG+ P G+P G PP
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP 265
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -3
Query: 131 PKGFXPPPXFXKGNSPX*XGGAPKXV*XGGXPP 33
P G PPP KG+ P G+P G PP
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP 286
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -3
Query: 131 PKGFXPPPXFXKGNSPX*XGGAPKXV*XGGXPP 33
P G PPP KG+ P G+P G PP
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP 271
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 596 PPPXXXXGGGGGGGFF 549
PPP GGGG GG F
Sbjct: 274 PPPQQGGGGGGAGGMF 289
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = -3
Query: 575 GGGGGGGF--FXX*KKXXXPPPPPP 507
GGGGGGG + PPPPPP
Sbjct: 19 GGGGGGGEAGYSGGAGVEAPPPPPP 43
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 27.9 bits (59), Expect = 9.9
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3
Query: 524 PPPPPPXGGG 495
PPPPPP GGG
Sbjct: 41 PPPPPPCGGG 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,129,356
Number of Sequences: 27780
Number of extensions: 207703
Number of successful extensions: 3036
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1816
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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