Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_L11
(841 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0495 + 9880714-9881196 32 0.65
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 32 0.65
06_01_0941 + 7241050-7241331 31 0.86
01_03_0005 + 11568545-11569119,11569179-11569191 31 0.86
05_06_0282 + 26915249-26915881 30 2.6
04_04_1182 + 31531426-31531702,31533741-31533997,31534672-315348... 29 3.5
12_02_1274 - 27480012-27480383 29 4.6
07_01_0974 + 8211602-8212051 29 4.6
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341... 29 4.6
12_02_0478 + 19514509-19514940,19515749-19515820,19515954-195159... 29 6.1
09_04_0368 + 17005231-17005437,17005707-17005963,17006061-170061... 29 6.1
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225 29 6.1
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 28 8.1
09_06_0020 - 20267190-20267612,20269086-20269495,20269573-202697... 28 8.1
02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060 28 8.1
>09_02_0495 + 9880714-9881196
Length = 160
Score = 31.9 bits (69), Expect = 0.65
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 421 PPPPPVXXXKKXXXGGGGGAXXXXXXXTQXPPP 519
PPPPP GGG G T PPP
Sbjct: 51 PPPPPAGSSSSSSSGGGDGGAGGLFGGTYPPPP 83
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +2
Query: 401 GXKXGXXPPPPXXXXXKKXGXGGGGGXXXXXXXKPXPPPPXG 526
G PPPP GGG G PPPP G
Sbjct: 44 GGAVNSYPPPPPAGSSSSSSSGGGDGGAGGLFGGTYPPPPPG 85
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 31.9 bits (69), Expect = 0.65
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 420 PPPPPXXXXXKXXXXGGGGGXXXXKXXNPXPP 515
PPPPP GGGGG + P PP
Sbjct: 9 PPPPPPPQHPPPPQAGGGGGGEFYRGPPPQPP 40
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 476 PPPPPXXXFXXXXTGGGGGXPXXXXXPP 393
PPPPP GGGGG PP
Sbjct: 10 PPPPPPQHPPPPQAGGGGGGEFYRGPPP 37
>06_01_0941 + 7241050-7241331
Length = 93
Score = 31.5 bits (68), Expect = 0.86
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 413 GXXPPPPXXXXXKKXGXGGGGG 478
G PPPP K+ G GGGGG
Sbjct: 17 GSDPPPPSSSSGKRSGGGGGGG 38
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +2
Query: 422 PPPPXXXXXKKXGXGGGGGXXXXXXXKPXPPPPXGGG 532
PPPP G GGGGG P PP GGG
Sbjct: 70 PPPPSYPS----GGGGGGGGGTVMYTSPPPPYSGGGG 102
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 7/44 (15%)
Frame = +1
Query: 421 PPPPPVXXXK-------KXXXGGGGGAXXXXXXXTQXPPPXXGG 531
PPPPPV GGGGG T PPP GG
Sbjct: 57 PPPPPVVTPTPQCPPPPSYPSGGGGGGGGGTVMYTSPPPPYSGG 100
>05_06_0282 + 26915249-26915881
Length = 210
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +2
Query: 401 GXKXGXXPPPPXXXXXKKXGXGGGGGXXXXXXXKPXPPPPXGGG 532
G + G PP P GGGG PPPP GG
Sbjct: 54 GGRSGNAPPSPRPHGRVTPLADGGGGGVLRRPPGRGPPPPGPGG 97
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 479 APPPPPXXXFXXXXTGGGGGXPXXXXXPP 393
APPPPP GG G P PP
Sbjct: 134 APPPPPDPNTPVQPLSGGDGRPRQLAPPP 162
>04_04_1182 +
31531426-31531702,31533741-31533997,31534672-31534818,
31535974-31536111
Length = 272
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 449 KKXGXGGGGGXXXXXXXKPXPPPP 520
++ G GGGGG P PPPP
Sbjct: 46 REEGPGGGGGGGGGMGIPPRPPPP 69
>12_02_1274 - 27480012-27480383
Length = 123
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 414 GXPPPPPXXXXXKXXXXGGGGGXXXXKXXNPXPPPXXGGG 533
G P P K GGGGG K P P GGG
Sbjct: 32 GMPAPQGATTMAKAMEAGGGGGLNDHKTFLPPVPGMGGGG 71
>07_01_0974 + 8211602-8212051
Length = 149
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 473 PPPPXXXFXXXXTGGGGGXPXXXXXPP 393
PPPP TGGGG P PP
Sbjct: 49 PPPPSSPVGGGGTGGGGPSPPTNPAPP 75
>06_02_0257 -
13533689-13533714,13533799-13533925,13534013-13534121,
13534193-13534272,13534758-13534979,13536070-13536318,
13537032-13537484,13539834-13540556
Length = 662
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = -1
Query: 529 PPXXGGGX---GFXXXXXXXPPPPPXXXFFXXXXXGGGGG 419
PP GGG GF PPPPP GGG G
Sbjct: 43 PPGGGGGDRRGGFQLPPDAAPPPPPPPPPSSAAAGGGGPG 82
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = -3
Query: 530 PPXXGGGXWVXXF--XXXXAPPPPPXXXFXXXXTGGGG 423
PP GGG F APPPPP GGGG
Sbjct: 43 PPGGGGGDRRGGFQLPPDAAPPPPPPPPPSSAAAGGGG 80
>12_02_0478 +
19514509-19514940,19515749-19515820,19515954-19515986,
19516169-19516830,19516905-19517045,19518634-19518830,
19518878-19518965,19518987-19519041,19519501-19519571,
19519709-19519763,19519881-19519896,19520286-19520361,
19521202-19521240,19521312-19521333
Length = 652
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 421 PPPPPVXXXKKXXXGGGGGAXXXXXXXTQXPPPXXG 528
PPPPP ++ GGG + PPP G
Sbjct: 83 PPPPPPQQQQQREAARGGGVARAGPALSVAPPPTAG 118
>09_04_0368 +
17005231-17005437,17005707-17005963,17006061-17006115,
17006196-17006276,17006357-17006453,17006560-17006627,
17006788-17006886,17007008-17007049,17007124-17007263,
17007882-17008018,17008275-17008444
Length = 450
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -3
Query: 506 WVXXFXXXXAPPPPPXXXFXXXXTGGGGGXP 414
W+ PPPPP GGGGG P
Sbjct: 8 WLLLPSFPWPPPPPPGSSSGRGGGGGGGGDP 38
>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
Length = 467
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = +2
Query: 458 GXGGGGGXXXXXXXKPXPPP-PXGGG 532
G GGGGG KP PPP P G
Sbjct: 21 GGGGGGGGFSPTAAKPPPPPSPRANG 46
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1
Query: 478 PPPPPXXXFFXXXXXGGGGGXP 413
PPPPP ++ GGG G P
Sbjct: 80 PPPPPPFEYYPAVGGGGGFGAP 101
>09_06_0020 -
20267190-20267612,20269086-20269495,20269573-20269747,
20270833-20271066,20271164-20271265,20271354-20272091,
20272204-20272321,20272417-20272667,20272768-20272932
Length = 871
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 458 GXGGGGGXXXXXXXKPXPPPPXGGG 532
G GGGGG P PP P GG
Sbjct: 20 GGGGGGGGVHNSRLLPTPPVPKPGG 44
>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
Length = 794
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 422 PPPPXXXXXKKXGXGGGGGXXXXXXXKPXPPPP 520
PPPP + G G G P PPPP
Sbjct: 11 PPPPPPPPFGRGGGGAGYPRGHKQLYAPPPPPP 43
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,959,167
Number of Sequences: 37544
Number of extensions: 447331
Number of successful extensions: 3852
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3075
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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