Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_L10
         (781 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132943-12|CAB81978.3|  514|Caenorhabditis elegans Hypothetical...    34   0.099
AL031635-10|CAA21037.2|  492|Caenorhabditis elegans Hypothetical...    34   0.099
AF022984-1|AAB69953.1|  540|Caenorhabditis elegans Hypothetical ...    33   0.23 
U41007-17|AAA82261.1|  507|Caenorhabditis elegans Hypothetical p...    32   0.53 
Z68227-4|CAA92518.1|  480|Caenorhabditis elegans Hypothetical pr...    31   0.70 
Z68227-3|CAA92519.1|  507|Caenorhabditis elegans Hypothetical pr...    31   0.70 
Z72502-13|CAA96586.2|  439|Caenorhabditis elegans Hypothetical p...    30   1.6  
AF016419-1|AAG24051.1|  499|Caenorhabditis elegans Hypothetical ...    30   1.6  
Z72508-6|CAA96643.1|  415|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z71259-4|CAA95788.2|  501|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U53180-2|AAK68284.1|  477|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AC024881-9|AAK71410.1|  588|Caenorhabditis elegans Hypothetical ...    29   2.8  
Z74036-3|CAA98488.1|  517|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z71185-7|CAA94907.2|  520|Caenorhabditis elegans Hypothetical pr...    29   4.9  
AL132862-29|CAI79284.1|  109|Caenorhabditis elegans Hypothetical...    29   4.9  
U53180-1|AAK68285.1|  492|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AF067937-1|AAF99912.1|  533|Caenorhabditis elegans Hypothetical ...    28   6.5  
AF099917-8|AAC68779.2|  457|Caenorhabditis elegans Hypothetical ...    28   8.6  
AF067937-3|AAF99913.2|  559|Caenorhabditis elegans Hypothetical ...    28   8.6  

>AL132943-12|CAB81978.3|  514|Caenorhabditis elegans Hypothetical
           protein Y116F11B.9a protein.
          Length = 514

 Score = 34.3 bits (75), Expect = 0.099
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = -3

Query: 599 IRTEGQFAAFNDCLYRSMSSAGWLLVIDVDEVVLP 495
           +  + Q AA+ DCL +   SA ++  +D+D+V++P
Sbjct: 245 VEFQNQAAAYTDCLLQYKESAQFITFLDIDDVIIP 279


>AL031635-10|CAA21037.2|  492|Caenorhabditis elegans Hypothetical
           protein Y47D3B.4 protein.
          Length = 492

 Score = 34.3 bits (75), Expect = 0.099
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = -3

Query: 572 FNDCLYRSMSSAGWLLVIDVDEVVLP 495
           +NDC Y  + +  ++L+ID+DEV++P
Sbjct: 317 YNDCFYNYIHTHRYVLIIDIDEVIVP 342


>AF022984-1|AAB69953.1|  540|Caenorhabditis elegans Hypothetical
           protein ZK488.6 protein.
          Length = 540

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 25/134 (18%), Positives = 56/134 (41%), Gaps = 2/134 (1%)
 Frame = -3

Query: 569 NDCLYRSMSSAGWLLVIDVDEVVLPHREXXXXXXXXXXXXSYNPPS--KAPSAFLFRNAF 396
           NDC +RS   + W  +ID+DE +    +              +  S  +    ++ ++ +
Sbjct: 332 NDCHHRSKHFSKWTALIDIDERLEMKSDKFKTVVDYLDSIQDDSISSLRFRVKWVMKHNY 391

Query: 395 FYLRWEDDKEATAPLTTARKTRRWATPHALKNRSKYALRPRDAVELGNHFLWELAPGASS 216
              R+E++ +  + +    K +  +     +++ K  +RP +   +  H   ++  G   
Sbjct: 392 TPARYENETQLQSEMIF-HKYQNTSQLGRERDQPKCIIRPENVAMMSIHGPKDMYKGKKK 450

Query: 215 VGVPTDRALLHHYR 174
           + VP D   + HYR
Sbjct: 451 IVVPEDTGFIRHYR 464


>U41007-17|AAA82261.1|  507|Caenorhabditis elegans Hypothetical
           protein C33H5.2 protein.
          Length = 507

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -3

Query: 602 EIRTEGQFAAFNDCLYRSMSSAGWLLVIDVDEVVLP 495
           +I    Q AA  DCL +   SA +L  +D+D+V++P
Sbjct: 234 QIEFRSQTAAQTDCLLQYKESAQYLAFLDLDDVLIP 269


>Z68227-4|CAA92518.1|  480|Caenorhabditis elegans Hypothetical
           protein F49C12.5b protein.
          Length = 480

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 9/55 (16%)
 Frame = -3

Query: 632 PW---KLPIVSKA------EIRTEGQFAAFNDCLYRSMSSAGWLLVIDVDEVVLP 495
           PW   K P VSK       +I    Q AA  DCL +   SA ++  +D+D+V++P
Sbjct: 188 PWVSVKYPEVSKIIADSYDQIEFRNQAAAQTDCLLQFKESARFITFLDLDDVLIP 242


>Z68227-3|CAA92519.1|  507|Caenorhabditis elegans Hypothetical
           protein F49C12.5a protein.
          Length = 507

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 9/55 (16%)
 Frame = -3

Query: 632 PW---KLPIVSKA------EIRTEGQFAAFNDCLYRSMSSAGWLLVIDVDEVVLP 495
           PW   K P VSK       +I    Q AA  DCL +   SA ++  +D+D+V++P
Sbjct: 215 PWVSVKYPEVSKIIADSYDQIEFRNQAAAQTDCLLQFKESARFITFLDLDDVLIP 269


>Z72502-13|CAA96586.2|  439|Caenorhabditis elegans Hypothetical
           protein C08B6.3 protein.
          Length = 439

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 584 QFAAFNDCLYRSMSSAGWLLVIDVDEVVL 498
           Q  AF DC  RS   + W L  D+DE +L
Sbjct: 249 QMVAFRDCTLRSRFESKWSLFSDIDERLL 277


>AF016419-1|AAG24051.1|  499|Caenorhabditis elegans Hypothetical
           protein F07G11.4 protein.
          Length = 499

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = -3

Query: 602 EIRTEGQFAAFNDCLYRSMSSAGWLLVIDVDEVVLP 495
           +I    Q AA +DCL +   +A ++  +D+D++++P
Sbjct: 228 QIELRSQVAAQSDCLLQYKEAARFITFLDLDDILIP 263


>Z72508-6|CAA96643.1|  415|Caenorhabditis elegans Hypothetical
           protein F28H7.7 protein.
          Length = 415

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 584 QFAAFNDCLYRSMSSAGWLLVIDVDEVVL 498
           Q+ A  DC  R+  SA W +  D+DE ++
Sbjct: 226 QYLAIADCHLRNQLSANWTIFSDIDERII 254


>Z71259-4|CAA95788.2|  501|Caenorhabditis elegans Hypothetical
           protein F13G3.3 protein.
          Length = 501

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -3

Query: 599 IRTEGQFAAFNDCLYRSMSSAGWLLVIDVDEVVLP 495
           +    Q AA  DCL R   S+ ++  +D+D++++P
Sbjct: 231 VEFRSQAAAQTDCLLRYKESSEFVAFVDLDDLIIP 265


>U53180-2|AAK68284.1|  477|Caenorhabditis elegans Hypothetical
           protein D1014.6 protein.
          Length = 477

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3

Query: 578 AAFNDCLYRSMSSAGWLLVIDVDE 507
           A  NDC +RS   + W  VID+DE
Sbjct: 287 AQINDCHHRSKFFSKWTAVIDIDE 310


>AC024881-9|AAK71410.1|  588|Caenorhabditis elegans Hypothetical
           protein Y97E10B.1 protein.
          Length = 588

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -3

Query: 602 EIRTEGQFAAFNDCLYRSMSSAGWLLVIDVDEVVLP 495
           +I    Q A+  DCL +   SA ++  +D+D+V++P
Sbjct: 275 QIEFRNQAASQTDCLLQFKESARFITFLDLDDVLIP 310


>Z74036-3|CAA98488.1|  517|Caenorhabditis elegans Hypothetical
           protein F55C10.4 protein.
          Length = 517

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = -3

Query: 599 IRTEGQFAAFNDCLYRSMSSAGWLLVIDVDEVVLPH 492
           +    Q  A  DCL +   SA ++  +D+D++++P+
Sbjct: 236 VELRNQAGAHTDCLLKYKESASFIGSLDMDDILIPN 271


>Z71185-7|CAA94907.2|  520|Caenorhabditis elegans Hypothetical
           protein C35A5.5 protein.
          Length = 520

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -3

Query: 584 QFAAFNDCLYRSMSSAGWLLVIDVDEVVLP 495
           Q  A +DCLY+   +A ++   D+D++ +P
Sbjct: 264 QAGAQSDCLYQYKEAAAFITFFDLDDIFIP 293


>AL132862-29|CAI79284.1|  109|Caenorhabditis elegans Hypothetical
           protein Y73F8A.36 protein.
          Length = 109

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +3

Query: 519 YDEQPSR*RHRPVQAVVERRELTFRPNFSFGYNRQFPRQRMIRPVSCXXXTKTRXERSGT 698
           +DE+P +   + +    E+R++  R     G+ R F   R  R V+C    K+  +   T
Sbjct: 31  HDEKPQKAHIKSLPKFTEKRKVLRRQARFIGFQRGFFETRCPRKVACLKVNKSTHKNPKT 90

Query: 699 -RC 704
            RC
Sbjct: 91  IRC 93


>U53180-1|AAK68285.1|  492|Caenorhabditis elegans Hypothetical
           protein D1014.7 protein.
          Length = 492

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 578 AAFNDCLYRSMSSAGWLLVIDVDE 507
           A  NDC +RS   + W  +ID+DE
Sbjct: 279 AQINDCHHRSKFFSKWTALIDIDE 302


>AF067937-1|AAF99912.1|  533|Caenorhabditis elegans Hypothetical
           protein F22F7.4 protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = -3

Query: 599 IRTEGQFAAFNDCLYRSMSSAGWLLVIDVDEVVLP 495
           +    Q AA  DC+     +  ++ VID+D++++P
Sbjct: 246 VELRNQAAAHTDCILMYKEAVSFIGVIDMDDILIP 280


>AF099917-8|AAC68779.2|  457|Caenorhabditis elegans Hypothetical
           protein F54D10.8 protein.
          Length = 457

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 4/135 (2%)
 Frame = -3

Query: 566 DCLYRSMSSAGWLLVIDVDEVVLPHREXXXXXXXXXXXXSYNPPSKAPSAFLFRNAFFYL 387
           DC  RS   + W+  +D+DE +    E               P S      L  +    L
Sbjct: 252 DCHLRSKYHSKWITFLDLDERISSGTEYNNLLEVIES----QPRSVGE---LHVSVLNIL 304

Query: 386 RWEDDKEATAPLTTARKT---RRWA-TPHALKNRSKYALRPRDAVELGNHFLWELAPGAS 219
           ++ED  E    +   ++    R+W  T     N SK  +RP     +  H+      G +
Sbjct: 305 KYEDTPEKFTSMEQLKEDMMFRKWTNTIDPTWNASKAIVRPEQIGIMFIHYAIAKQFGVN 364

Query: 218 SVGVPTDRALLHHYR 174
           +V +   +A + HYR
Sbjct: 365 TVKLNASQAAVRHYR 379


>AF067937-3|AAF99913.2|  559|Caenorhabditis elegans Hypothetical
           protein F22F7.3 protein.
          Length = 559

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 8/37 (21%), Positives = 22/37 (59%)
 Frame = -3

Query: 599 IRTEGQFAAFNDCLYRSMSSAGWLLVIDVDEVVLPHR 489
           +    Q AA  DC+     +  ++ ++D+D++++P++
Sbjct: 255 VELRNQAAAHTDCILMYKEAVSFVGILDMDDILIPNK 291


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,268,971
Number of Sequences: 27780
Number of extensions: 311419
Number of successful extensions: 969
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)