Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_L07
         (783 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0487 + 4272015-4272344                                           30   1.8  
11_07_0007 - 27262229-27262638,27263252-27263312                       29   3.2  
09_02_0274 + 6611555-6611615,6612229-6612638                           29   3.2  
01_05_0117 - 18300157-18301106,18301149-18301543,18302592-183026...    28   7.3  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    28   9.6  
03_02_0270 - 7011363-7012302,7013237-7013640,7014264-7014333,701...    28   9.6  

>08_01_0487 + 4272015-4272344
          Length = 109

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/25 (56%), Positives = 14/25 (56%)
 Frame = +2

Query: 299 LEMRLRSGGGGARLHPXXPXXXRRG 373
           LEMR R GGGGA   P  P   R G
Sbjct: 60  LEMRPRGGGGGAPRRPAPPAGPREG 84


>11_07_0007 - 27262229-27262638,27263252-27263312
          Length = 156

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 21/68 (30%), Positives = 22/68 (32%)
 Frame = -2

Query: 608 GGXXXSGXXGGXXPXXGRPXARRHXRXXGXSGRXXXEXXGKCXGXGXGRXXXGXSXRXGA 429
           GG    G  GG     G           G SG       G C G G G    G     GA
Sbjct: 45  GGHDRGGHGGGGGRLAGHGHGGGGIPGGGQSGGIGAPGGG-CGGAGHGGGSAGGGRGGGA 103

Query: 428 XXTARGGG 405
             + RGGG
Sbjct: 104 GGSHRGGG 111


>09_02_0274 + 6611555-6611615,6612229-6612638
          Length = 156

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 21/68 (30%), Positives = 22/68 (32%)
 Frame = -2

Query: 608 GGXXXSGXXGGXXPXXGRPXARRHXRXXGXSGRXXXEXXGKCXGXGXGRXXXGXSXRXGA 429
           GG    G  GG     G           G SG       G C G G G    G     GA
Sbjct: 45  GGHDRGGHGGGGGRLAGHGHGGGGIPGGGQSGGIGAPGGG-CGGAGHGGGSAGGGRGGGA 103

Query: 428 XXTARGGG 405
             + RGGG
Sbjct: 104 GGSHRGGG 111


>01_05_0117 - 18300157-18301106,18301149-18301543,18302592-18302681,
            18303723-18303836,18303903-18304046,18316147-18316312,
            18316396-18317130,18317219-18317422,18317496-18318177,
            18318272-18318528,18318604-18319298,18319345-18319382,
            18319847-18319928,18320018-18320112,18320443-18320526,
            18320601-18320891,18321521-18321853,18321948-18322150,
            18322243-18322399,18322482-18322585,18322675-18322835,
            18323511-18323824,18324317-18324589,18324666-18324967,
            18325459-18325549,18326140-18326190,18326700-18326768,
            18326926-18327017,18327082-18327148,18328582-18328746,
            18329027-18329103,18329572-18329766,18330208-18330275,
            18331081-18331172,18331399-18331522,18331608-18331705,
            18332384-18332997,18333620-18333626
          Length = 2892

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 236  HHALCSHDHSGSGVRSQVLQRLEMRLRSGGGGAR 337
            H A C+ D  G GVR + ++    RLR+G  G+R
Sbjct: 1373 HEAHCAQDRRGDGVRPRQIR----RLRAGEAGSR 1402


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = +2

Query: 557 APSXGXXXPPNPTXXSPPPXGRXXXXSGPP 646
           +PS     PP P    PPP G     S PP
Sbjct: 536 SPSPTAAAPPPPPPPPPPPSGNKPAFSPPP 565


>03_02_0270 -
           7011363-7012302,7013237-7013640,7014264-7014333,
           7014835-7015331,7015959-7016283,7018060-7018292
          Length = 822

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = +2

Query: 287 VLQRLEMRLRSGGGGARLHP 346
           VL  L  R RSGGGG+ LHP
Sbjct: 400 VLLSLPSRGRSGGGGSDLHP 419


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,420,440
Number of Sequences: 37544
Number of extensions: 239315
Number of successful extensions: 945
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)