Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_L05
         (797 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown prot...    69   6e-12
X17551-2|CAA35587.1|  888|Drosophila melanogaster protein ( D.me...    69   7e-12
AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p pro...    69   7e-12
M22874-2|AAA28675.1|  916|Drosophila melanogaster protein ( D.me...    63   4e-10
AY089343-1|AAL90081.2|  718|Drosophila melanogaster AT16518p pro...    63   4e-10
AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p pro...    56   7e-08
M17214-2|AAA28508.1|  858|Drosophila melanogaster protein ( D.me...    53   5e-07
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ...    46   8e-05
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ...    46   8e-05
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ...    46   8e-05
AM040243-1|CAJ13339.1|  656|Drosophila melanogaster pol protein ...    45   1e-04
AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.      44   2e-04
AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse tran...    44   2e-04
AY058505-1|AAL13734.1|  422|Drosophila melanogaster LD21309p pro...    31   1.8  
AF325529-1|AAK01218.1|  422|Drosophila melanogaster elongation i...    31   1.8  
AE014297-297|AAN13249.1|  422|Drosophila melanogaster CG2922-PG,...    31   1.8  
AE014297-296|AAN13248.1|  422|Drosophila melanogaster CG2922-PF,...    31   1.8  
AE014297-295|AAN13247.1|  422|Drosophila melanogaster CG2922-PE,...    31   1.8  
AE014297-294|AAN13246.1|  422|Drosophila melanogaster CG2922-PD,...    31   1.8  
AE014297-293|AAF51995.1|  422|Drosophila melanogaster CG2922-PC,...    31   1.8  
AE014297-292|AAG22214.1|  422|Drosophila melanogaster CG2922-PB,...    31   1.8  
AE014297-291|AAF51996.1|  422|Drosophila melanogaster CG2922-PA,...    31   1.8  
AY118395-1|AAM48424.1|  268|Drosophila melanogaster RE53819p pro...    29   7.4  
AE014296-1702|AAF50232.1|  268|Drosophila melanogaster CG18179-P...    29   7.4  
AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA...    29   9.7  

>AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown protein.
          Length = 908

 Score = 69.3 bits (162), Expect = 6e-12
 Identities = 37/114 (32%), Positives = 58/114 (50%)
 Frame = -1

Query: 650  VTLYQTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLE 471
            +T+Y+  + P   Y   ++  A   H+K  Q IQ++  R+  G  WFVRN  LH DL L 
Sbjct: 792  LTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLA 851

Query: 470  SISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPP 309
            ++   +   S R+ D+  RH N L  A       P  R+  +RR+P+ +I+  P
Sbjct: 852  TVFDEINKHSSRYHDRLERHRNRLASALNR--SRPPRRL--NRRQPRDLITRSP 901


>X17551-2|CAA35587.1|  888|Drosophila melanogaster protein (
            D.melanogaster white-one mutant DNA with Doc retroposon,
            inserted inwhite locuspromoter region.  ).
          Length = 888

 Score = 68.9 bits (161), Expect = 7e-12
 Identities = 28/82 (34%), Positives = 50/82 (60%)
 Frame = -1

Query: 644  LYQTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESI 465
            LY + ++P+ TY S ++ +A+R ++   Q  QSR  RI  GAPW++RN ++H DL ++ +
Sbjct: 785  LYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLV 844

Query: 464  SKYLQSASMRHFDKAARHENPL 399
             + +     ++ +K   H NPL
Sbjct: 845  IEVIAEKKTKYNEKLTTHTNPL 866


>AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p protein.
          Length = 888

 Score = 68.9 bits (161), Expect = 7e-12
 Identities = 28/82 (34%), Positives = 50/82 (60%)
 Frame = -1

Query: 644  LYQTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESI 465
            LY + ++P+ TY S ++ +A+R ++   Q  QSR  RI  GAPW++RN ++H DL ++ +
Sbjct: 785  LYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLV 844

Query: 464  SKYLQSASMRHFDKAARHENPL 399
             + +     ++ +K   H NPL
Sbjct: 845  IEVIAEKKTKYNEKLTTHTNPL 866


>M22874-2|AAA28675.1|  916|Drosophila melanogaster protein (
            D.melanogaster LINEelement J-1, clone J-1. ).
          Length = 916

 Score = 63.3 bits (147), Expect = 4e-10
 Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
 Frame = -1

Query: 650  VTLYQTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLE 471
            V +Y++ + P + Y   V+  AA+ HL   +I+Q++  R   GAPW++R  D+  DL + 
Sbjct: 797  VNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVP 856

Query: 470  SISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPAD-RMESSRRRPKHVISDPPD 306
             +   LQ+ + ++ ++   H N L    G      AD R    RR  +H   D P+
Sbjct: 857  KLGDKLQNIAQKYMERLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPN 912


>AY089343-1|AAL90081.2|  718|Drosophila melanogaster AT16518p
           protein.
          Length = 718

 Score = 63.3 bits (147), Expect = 4e-10
 Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
 Frame = -1

Query: 650 VTLYQTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLE 471
           V +Y++ + P + Y   V+  AA+ HL   +I+Q++  R   GAPW++R  D+  DL + 
Sbjct: 599 VNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVP 658

Query: 470 SISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPAD-RMESSRRRPKHVISDPPD 306
            +   LQ+ + ++ ++   H N L    G      AD R    RR  +H   D P+
Sbjct: 659 KLGDKLQNIAQKYLERLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPN 714


>AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p protein.
          Length = 906

 Score = 55.6 bits (128), Expect = 7e-08
 Identities = 23/82 (28%), Positives = 44/82 (53%)
 Frame = -1

Query: 644  LYQTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESI 465
            +Y  C+ P+  Y   ++  AA+ +    Q++Q+R  R     P++VR   LH DL+L ++
Sbjct: 800  VYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTV 859

Query: 464  SKYLQSASMRHFDKAARHENPL 399
             + +   + R+ D+  RH + L
Sbjct: 860  EEQISRHTSRYSDRLRRHHSIL 881


>M17214-2|AAA28508.1|  858|Drosophila melanogaster protein (
           D.melanogaster Fw repetitiveelement putative reverse
           transcriptase, complete cds,and putative binding
           protein, 3' end. ).
          Length = 858

 Score = 52.8 bits (121), Expect = 5e-07
 Identities = 21/63 (33%), Positives = 40/63 (63%)
 Frame = -1

Query: 650 VTLYQTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLE 471
           V LY + ++P+ TY S ++ +A+  ++   Q  QS+  R   GAPW+VR+ ++  DL++ 
Sbjct: 785 VLLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDLNIP 844

Query: 470 SIS 462
           S++
Sbjct: 845 SVT 847


>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
            protein.
          Length = 1103

 Score = 45.6 bits (103), Expect = 8e-05
 Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
 Frame = -1

Query: 650  VTLYQTCIRPVMTYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDL 474
            + L++  + P+  YA  ++    +    K  Q +++++ R  + A  + R  D+    ++
Sbjct: 855  ILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNI 914

Query: 473  ESISKYLQSASMRHFDKAARHENPLI--VAAGNYIPDPADRMESSRRR 336
            +S  +    AS R+ +    HENPLI  +    Y P   +R+E S+ R
Sbjct: 915  KSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKP---NRLELSKNR 959


>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
            protein.
          Length = 1103

 Score = 45.6 bits (103), Expect = 8e-05
 Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
 Frame = -1

Query: 650  VTLYQTCIRPVMTYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDL 474
            + L++  + P+  YA  ++    +    K  Q +++++ R  + A  + R  D+    ++
Sbjct: 855  ILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNI 914

Query: 473  ESISKYLQSASMRHFDKAARHENPLI--VAAGNYIPDPADRMESSRRR 336
            +S  +    AS R+ +    HENPLI  +    Y P   +R+E S+ R
Sbjct: 915  KSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKP---NRLELSKNR 959


>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
            protein.
          Length = 1103

 Score = 45.6 bits (103), Expect = 8e-05
 Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
 Frame = -1

Query: 650  VTLYQTCIRPVMTYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDL 474
            + L++  + P+  YA  ++    +    K  Q +++++ R  + A  + R  D+    ++
Sbjct: 855  ILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNI 914

Query: 473  ESISKYLQSASMRHFDKAARHENPLI--VAAGNYIPDPADRMESSRRR 336
            +S  +    AS R+ +    HENPLI  +    Y P   +R+E S+ R
Sbjct: 915  KSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKP---NRLELSKNR 959


>AM040243-1|CAJ13339.1|  656|Drosophila melanogaster pol protein
           protein.
          Length = 656

 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
 Frame = -1

Query: 650 VTLYQTCIRPVMTYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDL 474
           + L++  + P+  YA  ++    +    K  Q +++++ R  + A  + R  D+    ++
Sbjct: 408 ILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNI 467

Query: 473 ESISKYLQSASMRHFDKAARHENPLI--VAAGNYIPDPADRMESSRRR 336
           +S  +    AS R+ +    HENPLI  +    Y P   +R+E S+ R
Sbjct: 468 KSFDETFDKASQRYANSLTDHENPLIYDLLINAYKP---NRLELSKNR 512


>AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.
          Length = 884

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 19/79 (24%), Positives = 42/79 (53%)
 Frame = -1

Query: 686  NRXSRRXNSLE*VTLYQTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFV 507
            NR S+   S + + +++T   P++ Y S V+   A+ H+K  QI Q++  ++ +  P++ 
Sbjct: 806  NRKSKLSISNK-IIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYT 864

Query: 506  RNVDLHDDLDLESISKYLQ 450
                LH    ++ + + +Q
Sbjct: 865  NTKYLHIKAGVQKVQQKIQ 883


>AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse
           transcriptase protein.
          Length = 832

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 19/79 (24%), Positives = 42/79 (53%)
 Frame = -1

Query: 686 NRXSRRXNSLE*VTLYQTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFV 507
           NR S+   S + + +++T   P++ Y S V+   A+ H+K  QI Q++  ++ +  P++ 
Sbjct: 754 NRKSKLSISNK-IIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYT 812

Query: 506 RNVDLHDDLDLESISKYLQ 450
               LH    ++ + + +Q
Sbjct: 813 NTKYLHIKAGVQKVQQKIQ 831


>AY058505-1|AAL13734.1|  422|Drosophila melanogaster LD21309p
           protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -1

Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
           DLE ISKYL SA  +  + +       +++A G  +P  +   +  + R  + I D P+ 
Sbjct: 45  DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104

Query: 302 L 300
           +
Sbjct: 105 M 105


>AF325529-1|AAK01218.1|  422|Drosophila melanogaster elongation
           initiation factor 5C protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -1

Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
           DLE ISKYL SA  +  + +       +++A G  +P  +   +  + R  + I D P+ 
Sbjct: 45  DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104

Query: 302 L 300
           +
Sbjct: 105 M 105


>AE014297-297|AAN13249.1|  422|Drosophila melanogaster CG2922-PG,
           isoform G protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -1

Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
           DLE ISKYL SA  +  + +       +++A G  +P  +   +  + R  + I D P+ 
Sbjct: 45  DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104

Query: 302 L 300
           +
Sbjct: 105 M 105


>AE014297-296|AAN13248.1|  422|Drosophila melanogaster CG2922-PF,
           isoform F protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -1

Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
           DLE ISKYL SA  +  + +       +++A G  +P  +   +  + R  + I D P+ 
Sbjct: 45  DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104

Query: 302 L 300
           +
Sbjct: 105 M 105


>AE014297-295|AAN13247.1|  422|Drosophila melanogaster CG2922-PE,
           isoform E protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -1

Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
           DLE ISKYL SA  +  + +       +++A G  +P  +   +  + R  + I D P+ 
Sbjct: 45  DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104

Query: 302 L 300
           +
Sbjct: 105 M 105


>AE014297-294|AAN13246.1|  422|Drosophila melanogaster CG2922-PD,
           isoform D protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -1

Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
           DLE ISKYL SA  +  + +       +++A G  +P  +   +  + R  + I D P+ 
Sbjct: 45  DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104

Query: 302 L 300
           +
Sbjct: 105 M 105


>AE014297-293|AAF51995.1|  422|Drosophila melanogaster CG2922-PC,
           isoform C protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -1

Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
           DLE ISKYL SA  +  + +       +++A G  +P  +   +  + R  + I D P+ 
Sbjct: 45  DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104

Query: 302 L 300
           +
Sbjct: 105 M 105


>AE014297-292|AAG22214.1|  422|Drosophila melanogaster CG2922-PB,
           isoform B protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -1

Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
           DLE ISKYL SA  +  + +       +++A G  +P  +   +  + R  + I D P+ 
Sbjct: 45  DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104

Query: 302 L 300
           +
Sbjct: 105 M 105


>AE014297-291|AAF51996.1|  422|Drosophila melanogaster CG2922-PA,
           isoform A protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -1

Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
           DLE ISKYL SA  +  + +       +++A G  +P  +   +  + R  + I D P+ 
Sbjct: 45  DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104

Query: 302 L 300
           +
Sbjct: 105 M 105


>AY118395-1|AAM48424.1|  268|Drosophila melanogaster RE53819p
           protein.
          Length = 268

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -3

Query: 324 HLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLS 172
           H GS+   NGAFR    R  F S+P+   +G      +R   + F+ DL++
Sbjct: 95  HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRDIGLIRTPSVGFT-DLIN 144


>AE014296-1702|AAF50232.1|  268|Drosophila melanogaster CG18179-PA
           protein.
          Length = 268

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -3

Query: 324 HLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLS 172
           H GS+   NGAFR    R  F S+P+   +G      +R   + F+ DL++
Sbjct: 95  HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRDIGLIRTPSVGFT-DLIN 144


>AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA
            protein.
          Length = 1940

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
 Frame = +3

Query: 504  PDEP--RGSDGYPAKTGLNNLKG 566
            P EP  +G  GYP + G+N LKG
Sbjct: 1096 PGEPGAKGLGGYPGRNGINGLKG 1118


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,405,899
Number of Sequences: 53049
Number of extensions: 591059
Number of successful extensions: 1631
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1631
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)