Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_L04
         (1126 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016446-1|AAC24166.1|   66|Caenorhabditis elegans Hypothetical ...    34   0.21 
U55366-2|AAA97981.1|  156|Caenorhabditis elegans Hypothetical pr...    33   0.49 
AF016446-2|AAC24165.1|   70|Caenorhabditis elegans Hypothetical ...    33   0.49 
AF039052-9|AAF98625.1|  302|Caenorhabditis elegans Hypothetical ...    31   1.1  
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    31   1.5  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    31   1.5  
Z81088-5|CAB03133.1|  215|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical pr...    30   2.6  
X74838-1|CAA52832.1|  231|Caenorhabditis elegans cuticlin 2 prot...    30   2.6  
AC025721-11|AAK29900.1|   78|Caenorhabditis elegans Hypothetical...    30   2.6  
U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    30   3.4  
AL117203-5|CAB55107.1|  291|Caenorhabditis elegans Hypothetical ...    29   4.5  
Z79596-1|CAB01857.1|  830|Caenorhabditis elegans Hypothetical pr...    29   6.0  
L29031-1|AAB72228.2|  830|Caenorhabditis elegans dynamin protein.      29   6.0  
Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    29   7.9  

>AF016446-1|AAC24166.1|   66|Caenorhabditis elegans Hypothetical
           protein C02E7.7 protein.
          Length = 66

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 16/41 (39%), Positives = 16/41 (39%)
 Frame = +1

Query: 325 FXXPRGGGGGXXXTPPPPXXXKXXGXXXGGGXXXNPLXXXP 447
           F  P GGGGG    PPPP      G   GG     P    P
Sbjct: 17  FLFPSGGGGGCGCAPPPPPPACGCGGGGGGYAAPPPAYAAP 57


>U55366-2|AAA97981.1|  156|Caenorhabditis elegans Hypothetical
           protein F41F3.3 protein.
          Length = 156

 Score = 32.7 bits (71), Expect = 0.49
 Identities = 15/31 (48%), Positives = 15/31 (48%)
 Frame = +1

Query: 325 FXXPRGGGGGXXXTPPPPXXXKXXGXXXGGG 417
           F  P GGGGG    PPPP      G   GGG
Sbjct: 17  FLLPSGGGGGCGCAPPPP-PPSPCGCGGGGG 46


>AF016446-2|AAC24165.1|   70|Caenorhabditis elegans Hypothetical
           protein C02E7.6 protein.
          Length = 70

 Score = 32.7 bits (71), Expect = 0.49
 Identities = 17/43 (39%), Positives = 17/43 (39%)
 Frame = +1

Query: 325 FXXPRGGGGGXXXTPPPPXXXKXXGXXXGGGXXXNPLXXXPPP 453
           F  P GGGGG    PPPP          GGG    P    P P
Sbjct: 17  FLFPSGGGGGCGCAPPPP-----PACGCGGGAAPPPAYVAPAP 54


>AF039052-9|AAF98625.1|  302|Caenorhabditis elegans Hypothetical
           protein T22D1.2 protein.
          Length = 302

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -3

Query: 416 PPPKXXPXXFXKXGGGGVXXXPPPPPRGXXXNPP 315
           PPP   P      G G     PPPPP+G    PP
Sbjct: 45  PPPTGEPQDLS--GEGNASRRPPPPPKGTGTPPP 76



 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -3

Query: 416 PPPKXXPXXFXKXGGGGVXXXPPPPPRGXXXNPP 315
           PPP   P      G G     PPPPP+G    PP
Sbjct: 108 PPPTGEPQDL--SGEGNASRRPPPPPKGTGSPPP 139



 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -3

Query: 416 PPPKXXPXXFXKXGGGGVXXXPPPPPRGXXXNPP 315
           PPP   P      G G     PPPPP+G    PP
Sbjct: 139 PPPTGEPQDL--SGEGNASRRPPPPPKGTGSPPP 170



 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -3

Query: 416 PPPKXXPXXFXKXGGGGVXXXPPPPPRGXXXNPP 315
           PPP   P      G G     PPPPP+G    PP
Sbjct: 232 PPPTGEPQDLS--GEGNASRRPPPPPKGTGSPPP 263



 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -3

Query: 416 PPPKXXPXXFXKXGGGGVXXXPPPPPRGXXXNPP 315
           PPP   P      G G     PPPPP+G    PP
Sbjct: 263 PPPTGEPQDLS--GEGNASRRPPPPPKGTGTPPP 294



 Score = 29.5 bits (63), Expect = 4.5
 Identities = 13/40 (32%), Positives = 15/40 (37%)
 Frame = -3

Query: 434 RGXFXXPPPKXXPXXFXKXGGGGVXXXPPPPPRGXXXNPP 315
           +G    PPP            G     PPPPP+G    PP
Sbjct: 69  KGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPP 108



 Score = 29.5 bits (63), Expect = 4.5
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = -3

Query: 416 PPPKXXPXXFXKXGGGGVXXXPPPPPRGXXXNPP 315
           PPP   P      G       PPPPP+G    PP
Sbjct: 170 PPPTGEPQDLSTEGNAS--RRPPPPPKGTGTPPP 201


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -3

Query: 416 PPPKXXPXXFXKXGGGGVXXXPPPPPRG 333
           PPP   P      G G     PPPPP G
Sbjct: 632 PPPPPPPMGLPAVGAGAPPPPPPPPPSG 659


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -3

Query: 416 PPPKXXPXXFXKXGGGGVXXXPPPPPRG 333
           PPP   P      G G     PPPPP G
Sbjct: 458 PPPPPPPMGLPAVGAGAPPPPPPPPPSG 485


>Z81088-5|CAB03133.1|  215|Caenorhabditis elegans Hypothetical
           protein F53F1.5 protein.
          Length = 215

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = +1

Query: 325 FXXPRGGGGGXXXTPPPP 378
           F  P GGGGG    PPPP
Sbjct: 17  FLLPSGGGGGCGCAPPPP 34


>Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical
           protein F53F1.4 protein.
          Length = 105

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = +1

Query: 325 FXXPRGGGGGXXXTPPPP 378
           F  P GGGGG    PPPP
Sbjct: 17  FLLPSGGGGGCGCAPPPP 34


>X74838-1|CAA52832.1|  231|Caenorhabditis elegans cuticlin 2
           protein.
          Length = 231

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = +1

Query: 325 FXXPRGGGGGXXXTPPPP 378
           F  P GGGGG    PPPP
Sbjct: 17  FLLPSGGGGGCGCAPPPP 34


>AC025721-11|AAK29900.1|   78|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.12 protein.
          Length = 78

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = +1

Query: 340 GGGGGXXXTPPPPXXXKXXGXXXGGGXXXNPLXXXPPP 453
           GGG G    PPPP          GGG    P    P P
Sbjct: 26  GGGCGCGAPPPPPACAPPPAPACGGGAPPPPAYAAPAP 63


>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical
           protein R04E5.8a protein.
          Length = 997

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/34 (44%), Positives = 15/34 (44%)
 Frame = -3

Query: 416 PPPKXXPXXFXKXGGGGVXXXPPPPPRGXXXNPP 315
           PPP   P    K   GG    PPPPPR     PP
Sbjct: 122 PPPPPPPR---KSRAGGSSPPPPPPPRVPRTPPP 152


>AL117203-5|CAB55107.1|  291|Caenorhabditis elegans Hypothetical
           protein Y48C3A.8 protein.
          Length = 291

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +1

Query: 334 PRGGGGGXXXTPPPPXXXKXXGXXXGG 414
           P GGGGG    PPPP          GG
Sbjct: 157 PTGGGGGGSVPPPPPAATAAVSMNGGG 183


>Z79596-1|CAB01857.1|  830|Caenorhabditis elegans Hypothetical
           protein C02C6.1a protein.
          Length = 830

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 16/39 (41%), Positives = 16/39 (41%)
 Frame = +1

Query: 334 PRGGGGGXXXTPPPPXXXKXXGXXXGGGXXXNPLXXXPP 450
           PRGG G     PPPP      G   GGG    PL    P
Sbjct: 783 PRGGPGA----PPPPGMRPPPGAPGGGGGMYPPLIPTRP 817


>L29031-1|AAB72228.2|  830|Caenorhabditis elegans dynamin protein.
          Length = 830

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 16/39 (41%), Positives = 16/39 (41%)
 Frame = +1

Query: 334 PRGGGGGXXXTPPPPXXXKXXGXXXGGGXXXNPLXXXPP 450
           PRGG G     PPPP      G   GGG    PL    P
Sbjct: 783 PRGGPGA----PPPPGMRPPPGAPGGGGGMYPPLIPTRP 817


>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = +1

Query: 316 GGXFXXPRGGGGGXXXTPPPPXXXKXXGXXXGGG 417
           GG      GGG G    PPPP      G   GGG
Sbjct: 37  GGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGG 70



 Score = 28.7 bits (61), Expect = 7.9
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = +1

Query: 316 GGXFXXPRGGGGGXXXTPPPPXXXKXXGXXXGGG 417
           GG      GGG G    PPPP      G   GGG
Sbjct: 94  GGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGG 127


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.147    0.494 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,397,518
Number of Sequences: 27780
Number of extensions: 209499
Number of successful extensions: 756
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3036427278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)