Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_K22
(784 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 140 2e-34
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 138 1e-33
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 100 3e-22
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 51 2e-07
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 48 2e-06
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 30 0.33
SPAC23C11.04c |pnk1||DNA kinase/phosphatase Pnk1|Schizosaccharom... 29 0.75
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 0.99
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 27 4.0
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 27 4.0
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 27 4.0
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 5.3
SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr 1|||... 25 9.3
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 140 bits (339), Expect = 2e-34
Identities = 83/186 (44%), Positives = 111/186 (59%), Gaps = 3/186 (1%)
Frame = -3
Query: 692 DNQPRSTHSKYXRGERAMTQR*QLAR*IRADPGSHPAPRGVXQIEXTFDIDANGILNVSA 513
DNQP + GERA T+ L G PAPRGV QIE TFD+DANGILNVSA
Sbjct: 431 DNQP-GVLIQVFEGERARTKDCNLLGKFELS-GIPPAPRGVPQIEVTFDVDANGILNVSA 488
Query: 512 IEKSTKQGEQ-DHHYQRQRSSLQGRDRAYG**GREVQKTRMTSKRRPSR--PKNALESYC 342
+EK T + ++ + R S + DR E +K + + SR KN LESY
Sbjct: 489 LEKGTGKTQKITITNDKGRLSKEEIDRMVS----EAEKYKAEDEAETSRIQAKNHLESYA 544
Query: 341 FSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPI 162
+S++++++D LK+K+ SDK+ I +TI+WLD N A K+EYE KQKELEG+ NPI
Sbjct: 545 YSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPI 604
Query: 161 ITKMYQ 144
+ K+YQ
Sbjct: 605 MAKIYQ 610
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 138 bits (333), Expect = 1e-33
Identities = 81/186 (43%), Positives = 111/186 (59%), Gaps = 3/186 (1%)
Frame = -3
Query: 692 DNQPRSTHSKYXRGERAMTQR*QLAR*IRADPGSHPAPRGVXQIEXTFDIDANGILNVSA 513
DNQP + GERA T+ L G PAPRGV QIE TFD+DANGILNVSA
Sbjct: 431 DNQP-GVLIQVFEGERARTKDCNLLGKFELS-GIPPAPRGVPQIEVTFDVDANGILNVSA 488
Query: 512 IEKSTKQGEQ-DHHYQRQRSSLQGRDRAYG**GREVQKTRMTSKRRPSR--PKNALESYC 342
+EK T + ++ + R S + DR E +K + + R KN LESY
Sbjct: 489 LEKGTGKTQKITITNDKGRLSKEEIDRMVA----EAEKYKAEDEAESGRIQAKNHLESYA 544
Query: 341 FSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPI 162
+S++++++D LK+K+ SDK+T+ +TI+WLDSN A K+E+E KQKELE + NPI
Sbjct: 545 YSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPI 604
Query: 161 ITKMYQ 144
+ K+YQ
Sbjct: 605 MAKIYQ 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 100 bits (239), Expect = 3e-22
Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 4/186 (2%)
Frame = -3
Query: 692 DNQPRSTHSKYXRGERAMTQR*QLAR*IRADPGSHPAPRGVXQIEXTFDIDANGILNVSA 513
DNQ Y GER +T+ L G PAPRGV QIE TF++DANG+L VSA
Sbjct: 460 DNQNTVLIQVY-EGERTLTKDNNLLGKFDLR-GIPPAPRGVPQIEVTFEVDANGVLTVSA 517
Query: 512 IEKSTKQGEQDHHYQRQRSSLQGRD--RAYG**GREVQKTRMTSKRRPSRPKNALESYCF 339
++KS K + + + L D R ++ ++ +R +R N LE+Y +
Sbjct: 518 VDKSGKGKPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEAR--NTLENYAY 575
Query: 338 SMKSTM-EDEKLKEKISDSDKQTILDKCNDTIKWLD-SNQLADKEEYEHKQKELEGICNP 165
S+K +DE+L K+ DKQ +LD D +WL+ + A KEE+E ++++L+ + +P
Sbjct: 576 SLKGQFDDDEQLGGKVDPEDKQAVLDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHP 635
Query: 164 IITKMY 147
I K+Y
Sbjct: 636 ITQKLY 641
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 51.2 bits (117), Expect = 2e-07
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Frame = -3
Query: 596 GSHPAPRGVXQIEXTFDIDANGILNVSAIEKSTKQGEQDH-HYQRQRSSLQGRDRAYG** 420
G P PRG ++E TF++DANGIL V+A+EK+T G H L
Sbjct: 466 GIPPMPRGQAELEATFELDANGILKVTAVEKTT--GRSAHIEITNSVGHLSSTKIQEMIE 523
Query: 419 GREVQKTRMTSKRRPSRPKNALESYCFSMKSTMEDEKLKEKISDSDKQTI---LDKCNDT 249
+ K + + K+ LESY ++++T+ + + K+ DK I L +C
Sbjct: 524 NADKFKQQDKDFAKKLEAKSQLESYISNIETTISEPNVMMKLKRGDKSKIEAQLAECMSQ 583
Query: 248 IKWLDSN 228
++ D+N
Sbjct: 584 LELEDTN 590
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 47.6 bits (108), Expect = 2e-06
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 2/153 (1%)
Frame = -3
Query: 596 GSHPAPRGVXQIEXTFDIDANGILNVSAIEKSTKQGEQDHHYQRQRSSLQGRDRAYG**G 417
G PAP+G QIE +FD+DA+GI+NVSA +K+T + S L +
Sbjct: 504 GIAPAPKGQPQIEVSFDVDADGIINVSARDKAT--NKDSSITVAGSSGLTDSEIEAMVAD 561
Query: 416 REVQKTRMTSKRRPSRPKNALESYCFSMKSTME--DEKLKEKISDSDKQTILDKCNDTIK 243
E + +++ N ES C ++S ++ +KL ++ + + I D K
Sbjct: 562 AEKYRASDMARKEAIENGNRAESVCTDIESNLDIHKDKLDQQAVEDLRSKITDLRETVAK 621
Query: 242 WLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 144
++ E+ + K E++ + + +Y+
Sbjct: 622 VNAGDEGITSEDMKKKIDEIQQLSLKVFESVYK 654
Score = 34.3 bits (75), Expect = 0.020
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = -1
Query: 634 KDNNLLGKFELTRDPTRRRVACXKLXXXXXXXXXXXXXXPLSRSPPNKENKITITNDKGR 455
+DN L+G F+LT + ++ NK++ IT+ G
Sbjct: 492 RDNKLIGNFQLTGIAPAPK-GQPQIEVSFDVDADGIINVSARDKATNKDSSITVAGSSG- 549
Query: 454 LSKEEIERMVNEAEKYR 404
L+ EIE MV +AEKYR
Sbjct: 550 LTDSEIEAMVADAEKYR 566
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 30.3 bits (65), Expect = 0.33
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -3
Query: 416 REVQKTRMTSKRRPSRPKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKC-NDTIKW 240
+ V+K + +SK+ + PKNA ++ M DE+ E S K+ K +D +
Sbjct: 108 KPVRKNKKSSKK--ASPKNAFDALADDMDDLSLDEEESESSEKSKKKKKKSKSKDDGSEA 165
Query: 239 LDSNQLADKEEYEHKQKE 186
LD + E+ + K+K+
Sbjct: 166 LDDGDIESSEKDKKKKKK 183
>SPAC23C11.04c |pnk1||DNA kinase/phosphatase
Pnk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 29.1 bits (62), Expect = 0.75
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -3
Query: 395 MTSKRRPSRPKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQL 222
M+SK+R S P+ +L SY F KS+ +K + DSD + + I+W ++ L
Sbjct: 1 MSSKKRKSPPQESLTSY-FE-KSSKSSKKYGSQNKDSDSSSTCLQQKIEIQWSITDSL 56
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 0.99
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 305 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKELE 180
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 496 NKENKITITNDKGRLSKEEIERMVNEAE 413
NK+ K T D SKEE+E +V E E
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE 556
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 26.6 bits (56), Expect = 4.0
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -3
Query: 371 RPKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 240
R K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 282 RRKEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1
Query: 463 KGRLSKEEIERMVNEAEK 410
KG LSKEE+ER V +A K
Sbjct: 525 KGTLSKEELERRVYDAAK 542
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 5.3
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 136 EESPEVCRASRAEHPEPE 83
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 25.4 bits (53), Expect = 9.3
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 125 RGLLRHPGTSSLLSDCKCLPILSA-CAH 205
R ++ H GT + D CLP SA C H
Sbjct: 122 REVVHHEGTCEICYDEGCLPFFSAECDH 149
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,851,183
Number of Sequences: 5004
Number of extensions: 56512
Number of successful extensions: 225
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -