Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_K19
         (737 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315...    33   0.24 
11_01_0662 - 5389746-5390548,5390727-5391368,5391624-5391659,539...    31   1.3  
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298...    29   2.9  
01_06_0695 - 31292622-31293317                                         28   6.7  
08_02_0104 + 12404890-12405129,12405244-12405333,12405953-124060...    28   8.9  

>02_04_0232 +
           21130122-21130454,21130895-21131053,21131424-21131582,
           21132420-21132512,21133321-21133437,21133623-21133697,
           21133878-21134104,21134200-21135073
          Length = 678

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 21/63 (33%), Positives = 28/63 (44%)
 Frame = +1

Query: 85  PSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGASTSRXAFWNA 264
           PS TP  ER  S+D   PR     Y   R+RD    K+  S   RD + +   R +    
Sbjct: 365 PSDTPHLERSQSSDRRRPRSSDPRYTPSRTRDEDAHKQHSS---RDYSHSKHERSSHTEH 421

Query: 265 KRD 273
           +RD
Sbjct: 422 RRD 424


>11_01_0662 -
           5389746-5390548,5390727-5391368,5391624-5391659,
           5392314-5392377
          Length = 514

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +1

Query: 139 RHRTELYPDLRSRDARVKKKTDSIDLRDPNGASTSRXAFWNAKRDY 276
           +HR +   DL++++A  K    SI  R+ +G ST    F    RDY
Sbjct: 14  KHRFKQAQDLKTKEAPRKLPVSSIIARNKHGGSTRGIMFSGHSRDY 59


>01_01_0386 -
           2985563-2985986,2986301-2986390,2986529-2986668,
           2986798-2986893,2987003-2987042,2987760-2987887
          Length = 305

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +1

Query: 88  STTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDS-IDLRDPNGASTSRXAFWNA 264
           S +PR+ R     YS  R R+        RD+R ++++ S  D R P G+     +   +
Sbjct: 143 SPSPRRGRSRGRSYSRSRSRSYSRSQSPRRDSRNERRSRSPRDSRSPRGSPRDSRSPRGS 202

Query: 265 KRDY*SP 285
            RD  SP
Sbjct: 203 PRDSRSP 209


>01_06_0695 - 31292622-31293317
          Length = 231

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/45 (35%), Positives = 18/45 (40%)
 Frame = +1

Query: 37  PGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLR 171
           P     L   Q D   PS++      SST  S P HR  L P  R
Sbjct: 3   PSTKQLLPMPQQDPNSPSSSTSSSSSSSTSPSHPHHRAPLPPSPR 47


>08_02_0104 +
           12404890-12405129,12405244-12405333,12405953-12406036,
           12406888-12407132,12409032-12409095,12409270-12409968,
           12410063-12410176,12410287-12410418,12410594-12410770,
           12411085-12411138,12411230-12411292,12411396-12412307,
           12412408-12412535,12413680-12413962
          Length = 1094

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 19/61 (31%), Positives = 26/61 (42%)
 Frame = +1

Query: 31  ESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSI 210
           +SPG  L   R  HD +L         KSST  +  R   E      SR     +KT+S+
Sbjct: 734 DSPGDSL---RDVHDISLNLKLSLDSEKSSTKENSVRRNLEDAVQKLSRGVSANRKTESV 790

Query: 211 D 213
           +
Sbjct: 791 E 791


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,210,680
Number of Sequences: 37544
Number of extensions: 228355
Number of successful extensions: 543
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)