Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_K11
(1076 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0796 + 6190931-6192745 28 0.24
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 26 1.8
01_01_0046 - 331758-332627 25 2.1
12_02_0299 - 17051570-17052474,17053542-17053755 25 2.6
06_03_1172 - 28147957-28148274,28149362-28149877 26 2.7
11_01_0192 - 1523572-1526097 30 2.8
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 24 5.5
03_01_0515 - 3864796-3865425 24 6.1
05_01_0131 + 888247-888771,889092-889154 24 6.1
05_07_0034 - 27200513-27200605,27200750-27200802,27201724-272017... 29 6.4
12_01_0558 + 4521616-4522296 26 7.8
>01_01_0796 + 6190931-6192745
Length = 604
Score = 27.9 bits (59), Expect(2) = 0.24
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 446 PPKXRGXGEFFFXXGGXPPPPPPP 517
PP R G+ PPPPPPP
Sbjct: 176 PPLRRRGGKRPIQGSSVPPPPPPP 199
Score = 24.6 bits (51), Expect(2) = 0.24
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = +2
Query: 497 PPPPPPPXXXXXXXXXXXXXPPL 565
PPPPPPP PP+
Sbjct: 237 PPPPPPPAAGGSLWIPELPPPPV 259
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 25.8 bits (54), Expect(2) = 1.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 491 GXPPPPPPP 517
G PPPPPPP
Sbjct: 1107 GAPPPPPPP 1115
Score = 23.4 bits (48), Expect(2) = 1.8
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +2
Query: 443 SPPKXRGXGEFFFXXGGXPPPPPP 514
SPP + GG PP PPP
Sbjct: 1064 SPPPPQRENTSVGIQGGIPPLPPP 1087
>01_01_0046 - 331758-332627
Length = 289
Score = 25.0 bits (52), Expect(2) = 2.1
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 473 FFFXXGGXPPPPPPP 517
++F PPPPPPP
Sbjct: 13 YWFPYWTSPPPPPPP 27
Score = 24.2 bits (50), Expect(2) = 2.1
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +2
Query: 497 PPPPPPPXXXXXXXXXXXXXPP 562
PPPPPPP PP
Sbjct: 22 PPPPPPPPPPPSSSRYRPPSPP 43
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 24.6 bits (51), Expect(2) = 2.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 476 FFXXGGXPPPPPPP 517
F+ PPPPPPP
Sbjct: 316 FYPSPPPPPPPPPP 329
Score = 24.2 bits (50), Expect(2) = 2.6
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +2
Query: 497 PPPPPPPXXXXXXXXXXXXXPP 562
PPPPPPP PP
Sbjct: 326 PPPPPPPSFPWPFPPLAPLFPP 347
Score = 23.8 bits (49), Expect(2) = 9.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 497 PPPPPPP 517
PPPPPPP
Sbjct: 289 PPPPPPP 295
Score = 23.0 bits (47), Expect(2) = 9.6
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +2
Query: 500 PPPPPPXXXXXXXXXXXXXPPL 565
PPPPPP PPL
Sbjct: 320 PPPPPPPPPPPPPSFPWPFPPL 341
>06_03_1172 - 28147957-28148274,28149362-28149877
Length = 277
Score = 25.8 bits (54), Expect(2) = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 470 EFFFXXGGXPPPPPP 514
E+ GG PPPPPP
Sbjct: 2 EYSGAGGGAPPPPPP 16
Score = 23.0 bits (47), Expect(2) = 2.7
Identities = 9/25 (36%), Positives = 9/25 (36%)
Frame = +2
Query: 488 GGXPPPPPPPXXXXXXXXXXXXXPP 562
G PPPPP P PP
Sbjct: 9 GAPPPPPPSPPSVYPFLPPATFIPP 33
>11_01_0192 - 1523572-1526097
Length = 841
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 515 GGGGGGXPPPXXKKIPPXPXFWG 447
GGGGGG PP P FWG
Sbjct: 346 GGGGGGRPPAMKLVALPHTDFWG 368
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 23.8 bits (49), Expect(2) = 5.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 891 PPPPPPP 911
PPPPPPP
Sbjct: 54 PPPPPPP 60
Score = 23.8 bits (49), Expect(2) = 5.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 894 PPPPPPP 914
PPPPPPP
Sbjct: 92 PPPPPPP 98
>03_01_0515 - 3864796-3865425
Length = 209
Score = 23.8 bits (49), Expect(2) = 6.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 891 PPPPPPP 911
PPPPPPP
Sbjct: 71 PPPPPPP 77
Score = 23.8 bits (49), Expect(2) = 6.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 894 PPPPPPP 914
PPPPPPP
Sbjct: 89 PPPPPPP 95
>05_01_0131 + 888247-888771,889092-889154
Length = 195
Score = 23.8 bits (49), Expect(2) = 6.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 891 PPPPPPP 911
PPPPPPP
Sbjct: 133 PPPPPPP 139
Score = 23.8 bits (49), Expect(2) = 6.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 894 PPPPPPP 914
PPPPPPP
Sbjct: 160 PPPPPPP 166
>05_07_0034 -
27200513-27200605,27200750-27200802,27201724-27201797,
27202762-27202830,27203070-27204148
Length = 455
Score = 29.1 bits (62), Expect = 6.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 446 PPKXRGXGEFFFXXGGXPPPPPPP 517
PP+ G ++ + P PPPPP
Sbjct: 318 PPRSEGTNDYLYAMETEPEPPPPP 341
>12_01_0558 + 4521616-4522296
Length = 226
Score = 25.8 bits (54), Expect(2) = 7.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 491 GXPPPPPPP 517
G PPPPPPP
Sbjct: 13 GAPPPPPPP 21
Score = 21.4 bits (43), Expect(2) = 7.8
Identities = 8/21 (38%), Positives = 8/21 (38%)
Frame = +2
Query: 500 PPPPPPXXXXXXXXXXXXXPP 562
PPPPPP PP
Sbjct: 15 PPPPPPPTTTCSTSCRFVLPP 35
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,680,886
Number of Sequences: 37544
Number of extensions: 492586
Number of successful extensions: 36772
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16138
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3211228900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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