Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_K07
(856 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 33 0.34
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.45
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.45
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.45
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.60
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 32 0.60
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 1.0
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.0
Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 31 1.4
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 1.4
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 1.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 1.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.4
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 29 3.2
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.2
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 23 8.8
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 9.7
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 28 9.7
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 32.7 bits (71), Expect = 0.34
Identities = 42/181 (23%), Positives = 46/181 (25%)
Frame = -2
Query: 780 GXXGGDGGXEAGRXXKXXRSXXRRXXRXXXXXXXGEGXXGGXTXGXRGXXPGXGXXXXXX 601
G GG G +G RS G GG G +G G G
Sbjct: 107 GSQGGSQGGSSGGWGGSSRSDSGSGQGGWGGQQGGNSNAGGW-GGSQGGQNGGGGRGGSG 165
Query: 600 GXXEXGPGXXGRVXVXXGXXSXAGXGXGGGVGGXGXGXXXGXXGRXXXCVRXWGXXXXXX 421
G G G G + G G G GG G G G WG
Sbjct: 166 GQGGWGGSQDGGSQGGWGGQNGGGQGGNQGGGGGRGGNQGGEQG-------GWGGQGGSQ 218
Query: 420 XXRXXXXXGXWGGXXPXAGWXGGXXXXTXSXXXIGGXXXXQXXXGVFF*XKXGALWGXGX 241
G WG G GG GG G G+ WG G
Sbjct: 219 GGSQGGSQGGWGNQ---GGQQGGGRGGQQGPGGWGGGGRGGGWGG----WGRGSRWGWGR 271
Query: 240 P 238
P
Sbjct: 272 P 272
Score = 31.1 bits (67), Expect = 1.0
Identities = 36/152 (23%), Positives = 40/152 (26%), Gaps = 5/152 (3%)
Frame = -2
Query: 795 GXVRXGXXGGDGGXEAGRXXKXXRSXXRRXXRXXXXXXXGEGXXGGXTXGXRGXXPGXGX 616
G + G GG GG + G G G RG G G
Sbjct: 110 GGSQGGSSGGWGGSSRSDSGSGQGGWGGQQGGNSNAGGWGGSQGGQNGGGGRGGSGGQGG 169
Query: 615 XXXXXGXXEXGPGXXGRVXVXXGXXSXAGXGXGGGVGGX--GXGXXXGXXGRXXXCVRX- 445
G G G+ G G G GG GG G G G G +
Sbjct: 170 WGGSQDGGSQG-GWGGQNGGGQGGNQGGGGGRGGNQGGEQGGWGGQGGSQGGSQGGSQGG 228
Query: 444 WGXXXXXXXXRXXXXXGX--WGGXXPXAGWXG 355
WG G WGG GW G
Sbjct: 229 WGNQGGQQGGGRGGQQGPGGWGGGGRGGGWGG 260
Score = 29.5 bits (63), Expect = 3.2
Identities = 25/81 (30%), Positives = 27/81 (33%), Gaps = 1/81 (1%)
Frame = -2
Query: 678 GEGXXGGXTXGXR-GXXPGXGXXXXXXGXXEXGPGXXGRVXVXXGXXSXAGXGXGGGVGG 502
G+G GG G G G G G G G GR G +G G GGG GG
Sbjct: 19 GDGLFGGSDAGSGIGSSGGWGGSDASAGASAGGTGG-GR----GGGRGGSGGGRGGGSGG 73
Query: 501 XGXGXXXGXXGRXXXCVRXWG 439
G G WG
Sbjct: 74 GRGGSGGAGAGGSGSGSGGWG 94
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.45
Identities = 21/92 (22%), Positives = 23/92 (25%)
Frame = +1
Query: 244 PXXPQXPXFXLKKNPXXXLGXGXPXNXXXRXGXXXXPXXPPGRGXXPPPXPXSXXXXXXP 423
P P P + + G G P PP G PPP P
Sbjct: 681 PKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITG 740
Query: 424 XXXPXPPXSXTXXXXXXXXPXXPXPXPXHXPP 519
P PP P P P PP
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.45
Identities = 21/92 (22%), Positives = 23/92 (25%)
Frame = +1
Query: 244 PXXPQXPXFXLKKNPXXXLGXGXPXNXXXRXGXXXXPXXPPGRGXXPPPXPXSXXXXXXP 423
P P P + + G G P PP G PPP P
Sbjct: 681 PKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITG 740
Query: 424 XXXPXPPXSXTXXXXXXXXPXXPXPXPXHXPP 519
P PP P P P PP
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.45
Identities = 21/92 (22%), Positives = 23/92 (25%)
Frame = +1
Query: 244 PXXPQXPXFXLKKNPXXXLGXGXPXNXXXRXGXXXXPXXPPGRGXXPPPXPXSXXXXXXP 423
P P P + + G G P PP G PPP P
Sbjct: 264 PKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITG 323
Query: 424 XXXPXPPXSXTXXXXXXXXPXXPXPXPXHXPP 519
P PP P P P PP
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.9 bits (69), Expect = 0.60
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Frame = +2
Query: 620 PXPGXXPLXPXVXPPXXPSPXXXXXXXRXXRRXXDLXXFXXRPASXPPSP-PXXPXRTXP 796
P P P P PP P P +R RP PPSP P P RT P
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQR---------RPPRTPPSPEPRNPPRTPP 188
Query: 797 SXXXP 811
S P
Sbjct: 189 SPIPP 193
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.9 bits (69), Expect = 0.60
Identities = 23/68 (33%), Positives = 24/68 (35%)
Frame = -2
Query: 672 GXXGGXTXGXRGXXPGXGXXXXXXGXXEXGPGXXGRVXVXXGXXSXAGXGXGGGVGGXGX 493
G GG G G G G G G G G G G G GGG+GG G
Sbjct: 142 GGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYG--GGGDGGYGGGGFG-GGGMGGYGG 198
Query: 492 GXXXGXXG 469
G G G
Sbjct: 199 GMGGGGYG 206
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = -2
Query: 678 GEGXXGGXTXGXRGXXPGXGXXXXXXGXXEXGPGXXGRVXVXXGXXSXAGXGXGGGVGGX 499
G G GG G G G G G G G G G GGG+GG
Sbjct: 154 GGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGG 213
Query: 498 GXG 490
G G
Sbjct: 214 GYG 216
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/93 (25%), Positives = 24/93 (25%)
Frame = +2
Query: 548 PXXTXTRPXXPGPXSXXPXXXXXLPXPGXXPLXPXVXPPXXPSPXXXXXXXRXXRRXXDL 727
P P GP S P P P P V P PSP
Sbjct: 197 PVDPSDEPSPSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGP------- 249
Query: 728 XXFXXRPASXPPSPPXXPXRTXPSXXXPTAXAP 826
P PP PP P R P P P
Sbjct: 250 ---PGPPTRRPPGPPGPPTRRPPGPPGPPTRRP 279
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.1 bits (67), Expect = 1.0
Identities = 31/109 (28%), Positives = 32/109 (29%)
Frame = -2
Query: 678 GEGXXGGXTXGXRGXXPGXGXXXXXXGXXEXGPGXXGRVXVXXGXXSXAGXGXGGGVGGX 499
G G GG G G G G G G GR G + G GG GG
Sbjct: 28 GPGRWGGWGGNRWGGGGGPGGWGNNGGGG-WGRGG-GRGGGDWGGNNGGGGNWGGNGGGR 85
Query: 498 GXGXXXGXXGRXXXCVRXWGXXXXXXXXRXXXXXGXWGGXXPXAGWXGG 352
G G GR WG G WGG G GG
Sbjct: 86 GDWGGNGGGGRGGGGRGDWG-------GNNNGGGGNWGGGGNNDGGWGG 127
>Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = -2
Query: 516 GGVGGXGXGXXXGXXGRXXXCVRXWGXXXXXXXXRXXXXXGXWGGXXPXAGWXGG 352
GG GG G G G G +G WGG GW GG
Sbjct: 226 GGYGGGGYGGYGGGGGGFGSTGLGFGSGILAGSLLGYGLGSMWGGHHSYGGWGGG 280
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 5/58 (8%)
Frame = +1
Query: 361 PPGRGXXPPPXPXSXXXXXXPXXXPXPPXSXTXXXXXXXXPXXP-----XPXPXHXPP 519
PP RG PPP P P P PP P P P P PP
Sbjct: 298 PPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPP 355
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 5/58 (8%)
Frame = +1
Query: 361 PPGRGXXPPPXPXSXXXXXXPXXXPXPPXSXTXXXXXXXXPXXP-----XPXPXHXPP 519
PP RG PPP P P P PP P P P P PP
Sbjct: 298 PPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPP 355
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +1
Query: 382 PPPXPXSXXXXXXPXXXPXPPXSXTXXXXXXXXPXXPXPXPXHXPP 519
PPP P P P PP P P P P PP
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/73 (28%), Positives = 22/73 (30%), Gaps = 7/73 (9%)
Frame = +1
Query: 337 GXXXXPXXPPGRGXXPPPXP----XSXXXXXXPXXXPXPPXSXTXXXXXXXXPXXPXP-- 498
G P PP G PPP P + P P PP S P P P
Sbjct: 282 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGM 341
Query: 499 -XPXHXPPXXXSR 534
P PP R
Sbjct: 342 RYPGGMPPPPPPR 354
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/89 (24%), Positives = 23/89 (25%), Gaps = 4/89 (4%)
Frame = +3
Query: 429 PXXXPXXXHXPXXXPXXPXXAXSRXXPXPPRX----PIPPQXXXRXSXXXGPXXXXXPXX 596
P P P P P + P PP P PP R G P
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
Query: 597 XXXXXXXXXXQDXXPSPPXXRRPXSPPPP 683
P PP R P PPP
Sbjct: 322 PSRFGPPGMGGMPPPPPPGMRYPGGMPPP 350
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +1
Query: 361 PPGRGXXPPPXPXSXXXXXXPXXXPXPPXSXTXXXXXXXXPXXPXPXPXHXP 516
PPG G PPP P P P PP P P P P
Sbjct: 327 PPGMGGMPPPPPPG---MRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 375
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/73 (28%), Positives = 22/73 (30%), Gaps = 7/73 (9%)
Frame = +1
Query: 337 GXXXXPXXPPGRGXXPPPXP----XSXXXXXXPXXXPXPPXSXTXXXXXXXXPXXPXP-- 498
G P PP G PPP P + P P PP S P P P
Sbjct: 292 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGM 351
Query: 499 -XPXHXPPXXXSR 534
P PP R
Sbjct: 352 RYPGGMPPPPPPR 364
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/89 (24%), Positives = 23/89 (25%), Gaps = 4/89 (4%)
Frame = +3
Query: 429 PXXXPXXXHXPXXXPXXPXXAXSRXXPXPPRX----PIPPQXXXRXSXXXGPXXXXXPXX 596
P P P P P + P PP P PP R G P
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
Query: 597 XXXXXXXXXXQDXXPSPPXXRRPXSPPPP 683
P PP R P PPP
Sbjct: 332 PSRFGPPGMGGMPPPPPPGMRYPGGMPPP 360
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +1
Query: 361 PPGRGXXPPPXPXSXXXXXXPXXXPXPPXSXTXXXXXXXXPXXPXPXPXHXP 516
PPG G PPP P P P PP P P P P
Sbjct: 337 PPGMGGMPPPPPPG---MRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 385
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/108 (22%), Positives = 27/108 (25%), Gaps = 5/108 (4%)
Frame = +3
Query: 213 GXRVXKPGGGXXXPTXPXXFXK-----KKPPPXXGXXXPXQXSXKXXXXXXXXPPTRPXX 377
G R P G P P PPP P + PP P
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 286
Query: 378 XXPPXXQXXXXXXXPXXPXXXPXXXHXPXXXPXXPXXAXSRXXPXPPR 521
PP + P P P P A + P PPR
Sbjct: 287 GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPR 334
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/108 (22%), Positives = 27/108 (25%), Gaps = 5/108 (4%)
Frame = +3
Query: 213 GXRVXKPGGGXXXPTXPXXFXK-----KKPPPXXGXXXPXQXSXKXXXXXXXXPPTRPXX 377
G R P G P P PPP P + PP P
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 307
Query: 378 XXPPXXQXXXXXXXPXXPXXXPXXXHXPXXXPXXPXXAXSRXXPXPPR 521
PP + P P P P A + P PPR
Sbjct: 308 GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPR 355
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/108 (22%), Positives = 27/108 (25%), Gaps = 5/108 (4%)
Frame = +3
Query: 213 GXRVXKPGGGXXXPTXPXXFXK-----KKPPPXXGXXXPXQXSXKXXXXXXXXPPTRPXX 377
G R P G P P PPP P + PP P
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 292
Query: 378 XXPPXXQXXXXXXXPXXPXXXPXXXHXPXXXPXXPXXAXSRXXPXPPR 521
PP + P P P P A + P PPR
Sbjct: 293 GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPR 340
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/88 (20%), Positives = 24/88 (27%)
Frame = +2
Query: 548 PXXTXTRPXXPGPXSXXPXXXXXLPXPGXXPLXPXVXPPXXPSPXXXXXXXRXXRRXXDL 727
P +P P P P P P P + P P P + +
Sbjct: 62 PASVQQQPEAPAPAPTAPDVQQPGPAPVPVPEPAQLAPQSAPEPTPDAPAAAPVQETPQV 121
Query: 728 XXFXXRPASXPPSPPXXPXRTXPSXXXP 811
PA P +P P + P P
Sbjct: 122 APAPETPAPAPETPAPAPVQETPQVVAP 149
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 1/69 (1%)
Frame = -2
Query: 672 GXXGGX-TXGXRGXXPGXGXXXXXXGXXEXGPGXXGRVXVXXGXXSXAGXGXGGGVGGXG 496
G GG G G PG G G G G G G GGG G G
Sbjct: 38 GRSGGWGRPGWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGG 97
Query: 495 XGXXXGXXG 469
G G G
Sbjct: 98 GGGGGGRGG 106
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 23.4 bits (48), Expect(2) = 8.8
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 639 PSPPXXRRPXSPPPP 683
P PP P PPPP
Sbjct: 72 PPPPPPPMPCPPPPP 86
Score = 23.0 bits (47), Expect(2) = 8.8
Identities = 11/39 (28%), Positives = 13/39 (33%)
Frame = +3
Query: 420 PXXPXXXPXXXHXPXXXPXXPXXAXSRXXPXPPRXPIPP 536
P P P P P ++ P PP P PP
Sbjct: 37 PRMPCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPP 75
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = +3
Query: 357 PPTRPXXXXPPXXQXXXXXXXPXXPXXXPXXXHXPXXXPXXPXXAXSRXXPXPPRXPIPP 536
PPT P PP + P P P P S P PP P PP
Sbjct: 466 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSP---PPPPPLPPIATPSSVPPPPPPPPPPP 522
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = -2
Query: 582 PGXXGRVXVXXGXXSXAGXGXGGGVGGXGXGXXXGXXG 469
PG G + G + G G GG+GG G G G
Sbjct: 106 PGGPGGLGTPGGPGTPGGPGNPGGLGGPGNPGGPGTPG 143
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.145 0.507
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,766,591
Number of Sequences: 27780
Number of extensions: 191691
Number of successful extensions: 936
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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