Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_K04
(807 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.14
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.14
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.32
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.32
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.32
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.42
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 31 0.73
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 3.0
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 3.0
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 6.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 6.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 9.0
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 9.0
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 9.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 9.0
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/81 (27%), Positives = 22/81 (27%)
Frame = +1
Query: 559 PPXXPXPXXXHPPXPPXPSXXXXXXXNPPXXXXXPXXPPLXPPPXXXXXXXEXPXXXXXP 738
PP P P P PP P PP PP PPP P P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Query: 739 IXXXXXPXXXPXYXXXXPXPP 801
P P P PP
Sbjct: 321 PPSRFGP---PGMGGMPPPPP 338
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/81 (27%), Positives = 22/81 (27%)
Frame = +1
Query: 559 PPXXPXPXXXHPPXPPXPSXXXXXXXNPPXXXXXPXXPPLXPPPXXXXXXXEXPXXXXXP 738
PP P P P PP P PP PP PPP P P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Query: 739 IXXXXXPXXXPXYXXXXPXPP 801
P P P PP
Sbjct: 331 PPSRFGP---PGMGGMPPPPP 348
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.32
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 559 PPXXPXPXXXHPPXPPXPSXXXXXXXNPPXXXXXPXXPPLXPPP 690
PP P PP PP P PP P P PPP
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 559 PPXXPXPXXXHPPXPPXPSXXXXXXXNPPXXXXXPXXPPLXPPP 690
PP P PP PP P PP PP PPP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 31.5 bits (68), Expect = 0.73
Identities = 22/84 (26%), Positives = 23/84 (27%), Gaps = 3/84 (3%)
Frame = +1
Query: 559 PPXXPXPXXXHPPXPPXPSXXXXXXXNPPXXXXXPXXPPL---XPPPXXXXXXXEXPXXX 729
PP P P PP PP P PP PP+ PPP P
Sbjct: 716 PPGLP-PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 730 XXPIXXXXXPXXXPXYXXXXPXPP 801
P P P P P
Sbjct: 775 PPPGGFKGGPPPPPPPGMFAPMAP 798
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.32
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 559 PPXXPXPXXXHPPXPPXPSXXXXXXXNPPXXXXXPXXPPLXPPP 690
PP P PP PP P PP P P PPP
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 559 PPXXPXPXXXHPPXPPXPSXXXXXXXNPPXXXXXPXXPPLXPPP 690
PP P PP PP P PP PP PPP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 31.5 bits (68), Expect = 0.73
Identities = 22/84 (26%), Positives = 23/84 (27%), Gaps = 3/84 (3%)
Frame = +1
Query: 559 PPXXPXPXXXHPPXPPXPSXXXXXXXNPPXXXXXPXXPPL---XPPPXXXXXXXEXPXXX 729
PP P P PP PP P PP PP+ PPP P
Sbjct: 716 PPGLP-PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 730 XXPIXXXXXPXXXPXYXXXXPXPP 801
P P P P P
Sbjct: 775 PPPGGFKGGPPPPPPPGMFAPMAP 798
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.32
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 559 PPXXPXPXXXHPPXPPXPSXXXXXXXNPPXXXXXPXXPPLXPPP 690
PP P PP PP P PP P P PPP
Sbjct: 314 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 559 PPXXPXPXXXHPPXPPXPSXXXXXXXNPPXXXXXPXXPPLXPPP 690
PP P PP PP P PP PP PPP
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 31.5 bits (68), Expect = 0.73
Identities = 22/84 (26%), Positives = 23/84 (27%), Gaps = 3/84 (3%)
Frame = +1
Query: 559 PPXXPXPXXXHPPXPPXPSXXXXXXXNPPXXXXXPXXPPL---XPPPXXXXXXXEXPXXX 729
PP P P PP PP P PP PP+ PPP P
Sbjct: 299 PPGLP-PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Query: 730 XXPIXXXXXPXXXPXYXXXXPXPP 801
P P P P P
Sbjct: 358 PPPGGFKGGPPPPPPPGMFAPMAP 381
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.3 bits (70), Expect = 0.42
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +2
Query: 668 SPXXXPPPXXXXXXGXSPXXPPXP--SXXXXXRXXXPXTXPXXPPXPR 805
SP PPP G SP PP P R P P PP P+
Sbjct: 121 SPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQ 168
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +1
Query: 559 PPXXPXPXXXHPPXPPXPSXXXXXXXNPPXXXXXPXXPPLXPP 687
PP PP PP P PP P PP+ PP
Sbjct: 127 PPRKSRAGGSSPPPPPPPRVPR----TPPPRSPPPRRPPMTPP 165
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.5 bits (68), Expect = 0.73
Identities = 23/80 (28%), Positives = 24/80 (30%)
Frame = -2
Query: 800 GGXGXXXXXXGKXXGXXXXXMGXXXXXGXSXXXXXXXGGGXXGGXXGXXXXXGGLXXXXX 621
GG G G G MG G GGG GG GG+
Sbjct: 120 GGGGDGGGGYGGYGGGGYGGMGG----GPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGY 175
Query: 620 XXXGXGGXGGXXXXGXGXXG 561
G GG GG G G G
Sbjct: 176 GGGGDGGYGGGGFGGGGMGG 195
Score = 31.5 bits (68), Expect = 0.73
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -2
Query: 689 GGGXXGGXXGXXXXXGGLXXXXXXXXGXGGXGGXXXXGXGXXGG 558
GGG GG G GG+ G GG GG G G GG
Sbjct: 176 GGGGDGGYGGGGFGGGGM-GGYGGGMGGGGYGGGGMGGGGYGGG 218
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -2
Query: 689 GGGXXGGXXGXXXXXGGLXXXXXXXXGXGGXGGXXXXGXGXXGG 558
GGG GG GG G GG GG G G GG
Sbjct: 171 GGGGYGGGGDGGYGGGGFGGGGMGGYG-GGMGGGGYGGGGMGGG 213
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 562 PXXPXPXXXHPPXPPXPSXXXXXXXNPPXXXXXPXXPPLXPP 687
P P P PP P P PP P PP PP
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +1
Query: 559 PPXXPXPXXXHPPXPPXPSXXXXXXXNPPXXXXXPXXPPLXPPP 690
P P P PP PP P+ PP P PP+ PP
Sbjct: 44 PMPMPMPMPVCPPPPPCPAQFCP----PPPICPPPPPPPMPCPP 83
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +1
Query: 559 PPXXPXPXXXHPPXPPXPSXXXXXXXNPPXXXXXPXXPPLXP 684
PP P P +PP PP P P PP P
Sbjct: 138 PPHYPPPPPHYPPPPPAPHSAYIDHSAPRPAYIEHSAPPPQP 179
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/45 (28%), Positives = 15/45 (33%)
Frame = +2
Query: 668 SPXXXPPPXXXXXXGXSPXXPPXPSXXXXXRXXXPXTXPXXPPXP 802
SP PPP +P PP P + P PP P
Sbjct: 1337 SPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPP 1381
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/45 (28%), Positives = 15/45 (33%)
Frame = +2
Query: 668 SPXXXPPPXXXXXXGXSPXXPPXPSXXXXXRXXXPXTXPXXPPXP 802
+P PPP G P PP P + P PP P
Sbjct: 535 APTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPP 579
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +2
Query: 668 SPXXXPPPXXXXXXGXSPXXPPXPSXXXXXRXXXPXTXPXXPP 796
SP PPP P PP P P + P PP
Sbjct: 72 SPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPP 114
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +2
Query: 668 SPXXXPPPXXXXXXGXSPXXPPXPSXXXXXRXXXPXTXPXXPP 796
SP PPP P PP P P + P PP
Sbjct: 294 SPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPP 336
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 592 PPXPPXPSXXXXXXXNPPXXXXXPXXPPLXPPP 690
PP PP P PP PP PPP
Sbjct: 563 PPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPP 595
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,375,172
Number of Sequences: 27780
Number of extensions: 132316
Number of successful extensions: 826
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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