Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_K03
(774 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 31 0.24
SPBC800.03 |clr3||histone deacetylase |Schizosaccharomyces pombe... 28 1.3
SPBC16A3.13 |meu7|aah4|alpha-amylase homolog Aah4|Schizosaccharo... 27 2.3
SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase Byr2... 27 3.9
SPCC1223.11 |ptc2||protein phosphatase 2C Ptc2 |Schizosaccharomy... 26 5.2
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 26 5.2
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 26 5.2
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 26 6.9
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 26 6.9
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 26 6.9
SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein Msa1|Schizosa... 26 6.9
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 26 6.9
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 26 6.9
SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces pombe... 26 6.9
SPBC27.02c |ask1|mug181|DASH complex subunit Ask1|Schizosaccharo... 26 6.9
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 25 9.1
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 25 9.1
SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces ... 25 9.1
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 25 9.1
SPBC354.15 |fap1||L-pipecolate oxidase|Schizosaccharomyces pombe... 25 9.1
SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type tran... 25 9.1
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 30.7 bits (66), Expect = 0.24
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = -2
Query: 668 LESERTGDNP-TVRGSAGADPVGQ-DAPGWT--CQFCERTFSTNRGLGVHKRRAHPVET 504
L+ E + ++P T+ G++ A+ Q + P T C C+ F GL HKR H VET
Sbjct: 108 LKGEESHNSPGTLNGTSVANASKQPNMPNATFRCDKCDMMFVKQSGLTNHKRTYHQVET 166
>SPBC800.03 |clr3||histone deacetylase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 687
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 482 SSERHPYWSQQGGLYACGHPNPCW--SKRFVRRTGRSNQA-HPDPQDLRRRN 628
S E P W + L N CW +KR RR GR Q+ H + D+ ++
Sbjct: 616 SEEDLPTWYYRHSLVFVSSSNECWKKAKRAKRRYGRLMQSEHTETSDMMEQH 667
>SPBC16A3.13 |meu7|aah4|alpha-amylase homolog
Aah4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 774
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +3
Query: 246 RAPPRRGTRLGTKSGKVRLHQCPIRLPPPLSLNRFQSSSKPWKRAKEVS 392
R P GT+ K K H R P P+ N + KPWK + S
Sbjct: 294 RPIPHNGTKPDHKPWKHEEHCHHGRFPRPVPHNGTKPDHKPWKHEEHCS 342
Score = 26.6 bits (56), Expect = 3.9
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +3
Query: 246 RAPPRRGTRLGTKSGKVRLHQCPIRLPPPLSLNRFQSSSKPWKRAKEVS 392
R P GT+ K K H + P P+ N + KPWK + S
Sbjct: 182 RPVPHNGTKPDHKPWKHEEHCHHGKFPRPVPHNGTKPDHKPWKHEEHCS 230
Score = 25.8 bits (54), Expect = 6.9
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +3
Query: 246 RAPPRRGTRLGTKSGKVRLHQCPIRLPPPLSLNRFQSSSKPWK 374
R P GT+ K K H + P P+ N + KPWK
Sbjct: 267 RPVPHNGTKPDHKPWKHEEHCHHGKFPRPIPHNGTKPDHKPWK 309
Score = 25.8 bits (54), Expect = 6.9
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 246 RAPPRRGTRLGTKSGKVRLHQCPIRLPPPLSLNRFQSSSKPWKRAKEVSTRALTPLSEQP 425
R P T+ K K H + P P+ N + KPWK + S + E+P
Sbjct: 377 RPVPHNVTKPDHKPWKHEEHCHHGKFPRPVPHNGTKPDHKPWKHEEHCSCHEDHSVHERP 436
Query: 426 GL-GASEE 446
GA E+
Sbjct: 437 SAKGALED 444
>SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase
Byr2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 659
Score = 26.6 bits (56), Expect = 3.9
Identities = 21/84 (25%), Positives = 32/84 (38%)
Frame = +3
Query: 177 GVFGASFLARFLSSGSPPEVRLGRAPPRRGTRLGTKSGKVRLHQCPIRLPPPLSLNRFQS 356
G FG L R P E+ P R+ RL + PPL+++ Q
Sbjct: 253 GNFGQEILPRSSRRARPSEL----VCPLSSLRISVAEDVNRLPRIDRGFDPPLTVSSTQR 308
Query: 357 SSKPWKRAKEVSTRALTPLSEQPG 428
S+P K ++ + PL + G
Sbjct: 309 ISRPPSLQKSITMVGVEPLYQSNG 332
>SPCC1223.11 |ptc2||protein phosphatase 2C Ptc2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 370
Score = 26.2 bits (55), Expect = 5.2
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 337 DNGGGSLIGHWCKRTLPDLVPSRVP-RRGGARPSLTSGGL 221
D GG + +C++ LPD++ S+ +G +L SG L
Sbjct: 63 DGHGGDRVAKYCRQHLPDIIKSQPSFWKGNYDEALKSGFL 102
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 26.2 bits (55), Expect = 5.2
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Frame = +2
Query: 233 SQARPSTP----PTRDPAGNQIGQGALAPMPDKAPSAVVP*SLPEFFQTLEARQRGLHPS 400
S RPSTP P+ P N QG + PS V+P P+ + + PS
Sbjct: 443 SDTRPSTPRKVPPSTVPKMNPKLQGGNSVTAPSTPSKVLPAMSPKVAPKFQGGRSSTAPS 502
Query: 401 T 403
T
Sbjct: 503 T 503
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 26.2 bits (55), Expect = 5.2
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = -2
Query: 647 DNPTVRGSAGADPVGQDAPGWTCQF--CERTFSTNRGLGVHKRRAH--PVETNTDA 492
D+P G++ V D P + C C++ + GL HK H P+ T T A
Sbjct: 331 DSPLTIDYPGSNLVVVDKP-YKCPVPNCDKAYKNQNGLKYHKLHGHCSPITTPTPA 385
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 170 YDPSAVGQMSPDAARVLSELLEGGGEKTSVQGYETQD 60
++ S + MS D +LS + E +S+QGY+T D
Sbjct: 678 FELSQLSGMSLDDQELLSTTVSTIAELSSLQGYDTAD 714
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = -2
Query: 572 CERTFSTNRGLGVHKRRAHPVETNTDAAPMMVKRRWHGEEI 450
C+R+F+ + L H R H +T + P+ H + +
Sbjct: 113 CDRSFTRSDALAKHMRTVHEADTLRPSDPIPKAHPMHPQNV 153
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = -2
Query: 602 QDAPGWTCQFCERTFSTNRGLGVHKRRAHPVETNTDAAPMM 480
++ ++C FC R F+ + L H ++ H + N M+
Sbjct: 51 ENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQNLSERRML 91
>SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein
Msa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 417 EQPGLGASEEVDFLAMPPPL 476
EQPG + + F AMPPP+
Sbjct: 343 EQPGYPMNPSMMFAAMPPPI 362
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 25.8 bits (54), Expect = 6.9
Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
Frame = +3
Query: 330 PLSLNRFQSSSKPWKRAKEVSTRALTPLSEQPGLGASEEVDFLAMPPPLHHHRSGIRIGL 509
P+S + S P K+AKE ++TP + P E + + P H S +
Sbjct: 531 PISPDAALQSDGPLKKAKEPEESSITP-TTPPSFNVGESLSRRSASPLQHPRTSPDMLDK 589
Query: 510 NRVGSTLVDTQTPVGRK-GSFAELAGPTRR 596
+ T T V +K GS L RR
Sbjct: 590 TSPCKRGLGTITTVHKKHGSVDHLPSVKRR 619
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 25.8 bits (54), Expect = 6.9
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -3
Query: 220 PELR-KRARNDAPKTP-LPMIHPQSVRCRPMPLGFSPNS 110
PE++ + + N++P P +P HP S P PL S +S
Sbjct: 289 PEIKLEHSDNNSPSKPEIPFRHPTSKPLPPKPLSRSKSS 327
>SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 25.8 bits (54), Expect = 6.9
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 315 IRLPPPLSLNRFQSSSKPWKRAKEV 389
+ LP P+SL+R+ S WK+ ++
Sbjct: 222 VLLPSPVSLSRYMHRSLNWKKLYDI 246
>SPBC27.02c |ask1|mug181|DASH complex subunit
Ask1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 307
Score = 25.8 bits (54), Expect = 6.9
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +1
Query: 535 TPKPLLVEKVRSQNWQVQPGAS*PTGSAPAEPRTVGLSPVLSDSSGXQKLQV 690
T + L+ +V NWQVQ P E + SP +S S K+ +
Sbjct: 174 TGRSALLHRVLDTNWQVQVTPREPKNLQSQEVMDIDSSPFVSPSPISMKMDM 225
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 25.4 bits (53), Expect = 9.1
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 221 KPAGSQARPSTPPTRDPAGNQIGQGAL--APMPDKAP 325
KP G+ P +PP+ P+ + + AP+ +AP
Sbjct: 202 KPTGTPFVPKSPPSSSPSTTNVSNASTSSAPINPRAP 238
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 25.4 bits (53), Expect = 9.1
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +2
Query: 224 PAGSQARPSTP--PTRDPAGNQIGQGALAPMPDKAPSAVVP*SLPEFFQTLEARQRG 388
P + STP PT P I + P PD PS + P L E +L ++ G
Sbjct: 402 PTSNVPAYSTPARPTESPPPPPISSSSTTPRPDDKPS-LPPRGLSEDNDSLSLQKTG 457
>SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 25.4 bits (53), Expect = 9.1
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -3
Query: 628 VPPAQILWVRMRLVGPASSANEPFRPTGVWVSTSVEPTLLRPIRM 494
VPPAQI + M+ P + N PF+P GV PT + +R+
Sbjct: 300 VPPAQIDSI-MKAAFP--NYNAPFQPAGVGSVPLPAPTSSQSLRL 341
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 25.4 bits (53), Expect = 9.1
Identities = 12/47 (25%), Positives = 19/47 (40%)
Frame = +2
Query: 461 HATAASPSSERHPYWSQQGGLYACGHPNPCWSKRFVRRTGRSNQAHP 601
HAT ++PSS + W ++G A P + + R P
Sbjct: 518 HATVSTPSSIKSLSWHRRGDYLATSSPTSSSQAVLIHQLSRGASQSP 564
>SPBC354.15 |fap1||L-pipecolate oxidase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 25.4 bits (53), Expect = 9.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 165 IIGSGVFGASFLARFLSSGSPPEVRLGRAPP 257
I+G+GVFG S G L RAPP
Sbjct: 9 IVGAGVFGLSAALELTKRGGYTIKILDRAPP 39
>SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type
transcription factor Ams2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 697
Score = 25.4 bits (53), Expect = 9.1
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +3
Query: 306 QCPIRLPP-PLSLNRFQSSSKPWK 374
+C R PP P +L + Q S PW+
Sbjct: 581 ECYFRTPPKPTTLQKQQQSPSPWR 604
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,184,007
Number of Sequences: 5004
Number of extensions: 68952
Number of successful extensions: 249
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 249
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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