Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_J19
(729 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0875 + 32393496-32393881,32395297-32395397,32395493-323956... 110 1e-24
05_01_0108 - 709031-709204,709294-709359,709607-709714,709822-70... 33 0.18
01_07_0084 + 40976976-40977164,40978174-40978201,40978445-409785... 33 0.23
02_05_0448 - 29100674-29100716,29100821-29100902,29101010-291011... 33 0.31
04_04_1663 - 35156098-35156140,35156273-35156354,35156506-351565... 31 1.2
05_04_0447 + 21347786-21347974,21348104-21348169,21348266-213483... 30 1.6
01_06_0456 + 29521282-29522064 30 1.6
12_02_0742 - 22696478-22696984 30 2.2
01_06_1459 - 37515753-37515765,37516026-37516107,37516194-375163... 30 2.2
02_03_0049 + 14421408-14421942,14421988-14422842,14423847-144241... 29 2.9
11_01_0182 + 1437110-1438984 29 5.0
02_03_0415 + 18805541-18805610,18805962-18806128,18806616-188066... 29 5.0
01_06_0744 + 31628884-31629035,31629157-31629284,31629695-31629702 28 6.6
01_04_0063 - 15574855-15575143,15575398-15575602,15575746-155759... 28 6.6
11_04_0470 - 18092681-18092695,18092725-18092811,18093528-180935... 28 8.7
09_02_0404 - 8592872-8593231,8593735-8594004,8595551-8595964,859... 28 8.7
05_01_0533 + 4594169-4595065,4598375-4598983 28 8.7
03_05_0154 - 21302056-21302418,21302920-21303198,21304745-213051... 28 8.7
02_01_0777 - 5785295-5787370,5787723-5788769 28 8.7
>02_05_0875 +
32393496-32393881,32395297-32395397,32395493-32395674,
32396135-32396233,32396311-32396403
Length = 286
Score = 110 bits (264), Expect = 1e-24
Identities = 51/112 (45%), Positives = 68/112 (60%)
Frame = -1
Query: 624 GXRVXSXGDV*PREDSXGTXAXIDEGETDWKLIAIDSRDPNAEKLNDVQDVEALFXGLLR 445
G R + GDV + A IDEGE DWK++AI DP A +NDV DVE F G L
Sbjct: 169 GERRANIGDV-LKVKPLAALAMIDEGELDWKIVAISLDDPKASLVNDVDDVEKHFPGTLT 227
Query: 444 ATVEWFRLYKVPDGKPVNKFAFDGEAKNAEFAYKVVDEVHEFWKSLISGNVP 289
A +WFR YK+PDGKP N+F + + E+A KV++E +E W+ L+ N+P
Sbjct: 228 AIRDWFRDYKIPDGKPANRFGLGNKPTSKEYALKVIEETNESWEKLVKRNIP 279
>05_01_0108 -
709031-709204,709294-709359,709607-709714,709822-709887,
710125-710153,710239-710374
Length = 192
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -1
Query: 588 REDSXGTXAXIDEGETDWKLIAIDSRDPNAEKLNDVQDV 472
R + G ID+GE D K+IA+ + DP + ND++++
Sbjct: 123 RAKAIGLMPMIDQGEADDKIIAVCADDPEYKHYNDIKEL 161
>01_07_0084 + 40976976-40977164,40978174-40978201,40978445-40978575,
40978941-40979434,40979516-40979609,40979686-40979779,
40980342-40980444,40980550-40980601,40980716-40980756,
40980881-40980960,40981490-40981936,40982378-40982554,
40983205-40983803,40983886-40985040
Length = 1227
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -2
Query: 224 PKPPRCWRRLQRSGCPPPYRRQLTSGTSSRTYSSLNTSKQIGDSQ 90
P+P R W Q+S P PY RQ +SG S + S+Q Q
Sbjct: 1112 PEPSRQWNYGQQSYNPEPYSRQWSSGQQSYNTVTAEPSRQWSSGQ 1156
>02_05_0448 -
29100674-29100716,29100821-29100902,29101010-29101130,
29101481-29101546,29101628-29101735,29102083-29102148,
29102605-29102633,29102773-29102902
Length = 214
Score = 32.7 bits (71), Expect = 0.31
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = -1
Query: 588 REDSXGTXAXIDEGETDWKLIAIDSRDPNAEKLNDVQDVEALFXGLLRATVEWFRLYKVP 409
R + G ID+GE D K+IA+ + DP D++++ L+ +F YK
Sbjct: 121 RARAIGLMPMIDQGEKDDKIIAVCADDPEYRHFRDIKEIP---PHRLQEIRRFFEDYKKN 177
Query: 408 DGK--PVNKFAFDGEAKNA 358
+ K VN+F +A NA
Sbjct: 178 ENKEVAVNEFLPAEDAINA 196
>04_04_1663 -
35156098-35156140,35156273-35156354,35156506-35156575,
35156682-35156747,35156976-35157083,35157328-35157393,
35158451-35158479,35158566-35158692
Length = 196
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 588 REDSXGTXAXIDEGETDWKLIAIDSRDPNAEKLNDV 481
R + G ID+GE D K+IA+ + DP ND+
Sbjct: 120 RARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI 155
>05_04_0447 +
21347786-21347974,21348104-21348169,21348266-21348373,
21348469-21348534,21348662-21348782,21348880-21348961,
21349052-21349094
Length = 224
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = -1
Query: 588 REDSXGTXAXIDEGETDWKLIAIDSRDPNAEKLNDVQDVEALFXGLLRATVEWFRLYKVP 409
R + G ID+GE D K+IA+ + DP N++ + L L+ +F YK
Sbjct: 131 RARAIGLMPMIDQGEKDDKIIAVCADDPEYRHFNNLSE---LSPHRLQEIRRFFEDYKKN 187
Query: 408 DGKPV 394
+ K V
Sbjct: 188 ENKEV 192
>01_06_0456 + 29521282-29522064
Length = 260
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 186 RALEPSPTPRRLRSAPPGLRCRS 254
R + +PTP R+APP LRCR+
Sbjct: 200 RKTQQAPTPAHDRAAPPQLRCRT 222
>12_02_0742 - 22696478-22696984
Length = 168
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -3
Query: 250 RQRRPGGALRSRRGVGEGSSARAARR 173
R GG LR RRG G RAARR
Sbjct: 9 RPEAGGGGLRQRRGAAVGGRGRAARR 34
>01_06_1459 -
37515753-37515765,37516026-37516107,37516194-37516314,
37516407-37516472,37516558-37516665,37516755-37516820,
37516920-37516948,37517095-37517221
Length = 203
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 588 REDSXGTXAXIDEGETDWKLIAIDSRDPNAEKLNDVQDV 472
R + G ID+GE D K+IA+ DP ND+ ++
Sbjct: 120 RARAIGLMPMIDQGEKDDKIIAVCVDDPEYRHYNDLSEL 158
>02_03_0049 +
14421408-14421942,14421988-14422842,14423847-14424151,
14424469-14424984
Length = 736
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 230 SAPKPPRCWRRLQRSGCPPPYRRQLTSGTSSRTY 129
SAPK + W+ ++ PPP ++ G S R +
Sbjct: 441 SAPKSKKVWKEKPKAPAPPPPETEIEDGISFRFF 474
>11_01_0182 + 1437110-1438984
Length = 624
Score = 28.7 bits (61), Expect = 5.0
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +2
Query: 263 FILFISVASGTLPL---MRLFQNSWTSSTTL*ANSAFLASPSNANLFTGLPSGTLXSLNH 433
F L + +AS LP+ +RL +S TT ANS LAS S L + L L L+
Sbjct: 73 FSLLLRLASPLLPVPHRLRLLLSSPLPPTTFLANSFLLASSSPGCLPSALSLYALLFLSS 132
Query: 434 STVARRRP 457
S+ RP
Sbjct: 133 SSPPLLRP 140
>02_03_0415 +
18805541-18805610,18805962-18806128,18806616-18806645,
18807459-18807515,18808268-18808337,18808915-18810998
Length = 825
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +2
Query: 275 ISVASGTLPLMRLFQNSWTSSTTL*ANSAFLASPSNANLFTGLPSGTLXSLNHSTVARR 451
+S + LP+ QN W S L A F P+ LP+ + SL S +R
Sbjct: 266 MSFGTSNLPVNNPMQNDWPSQANLYAGEQFNLLPNMLQKQISLPNSPMSSLLFSQQQQR 324
>01_06_0744 + 31628884-31629035,31629157-31629284,31629695-31629702
Length = 95
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 177 RAARALEPSPTPRRLRSAPPGLRCRSLTR--SFCLYRL 284
RAA P+P PRRL +A P L RS S CL L
Sbjct: 27 RAASRAGPAPLPRRLPAAAPRLILRSPVEMSSVCLETL 64
>01_04_0063 -
15574855-15575143,15575398-15575602,15575746-15575947,
15576038-15576613,15576623-15576786,15576826-15576928,
15577259-15577847,15578056-15578372
Length = 814
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -2
Query: 230 SAPKPPRCWRRLQRSGCPPPYRRQLTSGTSSRTYSSLNTSKQIGDSQLY 84
SAPKP + W+ ++ P P + GT S +S N S + ++++
Sbjct: 621 SAPKPKKVWKEKPKTPAPSPPK---MGGTKSEGGNSSNESFKANQNKIF 666
>11_04_0470 -
18092681-18092695,18092725-18092811,18093528-18093593,
18093696-18093740,18093850-18093903,18093987-18094082,
18094161-18094241,18095634-18095714,18095798-18095884,
18095976-18096074,18096644-18096769,18098162-18098248,
18098321-18098389,18098711-18098806,18099053-18099169,
18099710-18099790,18099873-18100010,18100307-18100580,
18100735-18100830,18101612-18101757,18102883-18103141,
18103434-18103537,18103623-18103748,18103872-18103982,
18104200-18104304
Length = 881
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -1
Query: 354 FAYKVVDEVHEFWKSLISGNVPDATDINKMNVS 256
F +++ +H W+ ISG++PD + K +S
Sbjct: 232 FLLQLLQCIHSLWRGQISGSLPDQLESAKSKMS 264
>09_02_0404 -
8592872-8593231,8593735-8594004,8595551-8595964,
8596249-8596398
Length = 397
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 153 CQLSAVWRRAARALEPSPTPRRLRSAP-PGLRCRSLTRSF 269
C VWR R LEP TP + P GL+ RSF
Sbjct: 297 CDKEVVWRSMKRLLEPLATPETIEPDPVKGLQEFCDRRSF 336
>05_01_0533 + 4594169-4595065,4598375-4598983
Length = 501
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 256 SERQRRPGGALRSRRGVGEGSSARAA 179
SER+RRPGG + G G G+ A A
Sbjct: 426 SERRRRPGGLFKLLFGGGGGAGATGA 451
>03_05_0154 -
21302056-21302418,21302920-21303198,21304745-21305158,
21305443-21305592
Length = 401
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 153 CQLSAVWRRAARALEPSPTPRRLRSAP-PGLRCRSLTRSF 269
C VWR R LEP TP + P GL+ RSF
Sbjct: 300 CDKEVVWRSMKRLLEPLATPETIEPDPVKGLQEFCDRRSF 339
>02_01_0777 - 5785295-5787370,5787723-5788769
Length = 1040
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 277 IGCVRNVAADEA-LPKLVDLVNDFVSELCVLSFAIKRELIHRL 402
+G + AAD A P+ + ++ DFVS+L +L K++ H++
Sbjct: 21 VGALEQAAADFAEAPRRLQVLEDFVSDLGLLMQQSKQKHAHKM 63
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,176,391
Number of Sequences: 37544
Number of extensions: 297325
Number of successful extensions: 1276
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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