Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_J16
(1104 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.36
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.36
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.36
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.36
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.36
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.6
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 30 3.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.5
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 4.5
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.1 bits (72), Expect = 0.36
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2
Query: 728 PPPPPXXGGXPPPP 687
PPPPP GG PPPP
Sbjct: 95 PPPPPMMGGIPPPP 108
Score = 30.7 bits (66), Expect = 1.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 728 PPPPPXXGGXPPPP 687
PPPPP G PPPP
Sbjct: 105 PPPPPMFGAPPPPP 118
Score = 30.3 bits (65), Expect = 2.6
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2
Query: 725 PPPPXXGGXPPPP 687
PPPP GG PPPP
Sbjct: 75 PPPPGPGGIPPPP 87
Score = 29.9 bits (64), Expect = 3.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 727 PPPPXXXGGXPPPP 686
PPPP GG PPPP
Sbjct: 85 PPPPMFAGGIPPPP 98
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.36
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2
Query: 728 PPPPPXXGGXPPPP 687
PPPPP GG PPPP
Sbjct: 759 PPPPPPPGGCPPPP 772
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.36
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2
Query: 728 PPPPPXXGGXPPPP 687
PPPPP GG PPPP
Sbjct: 759 PPPPPPPGGCPPPP 772
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.36
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2
Query: 728 PPPPPXXGGXPPPP 687
PPPPP GG PPPP
Sbjct: 342 PPPPPPPGGCPPPP 355
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.1 bits (72), Expect = 0.36
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2
Query: 728 PPPPPXXGGXPPPP 687
PPPPP GG PPPP
Sbjct: 580 PPPPPMLGGPPPPP 593
Score = 29.1 bits (62), Expect = 5.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 728 PPPPPXXGGXPPPP 687
PPPPP G PPPP
Sbjct: 579 PPPPPPMLGGPPPP 592
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.6
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2
Query: 725 PPPPXXGGXPPPP 687
PPPP GG PPPP
Sbjct: 280 PPPPPAGGSPPPP 292
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.6
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2
Query: 725 PPPPXXGGXPPPP 687
PPPP GG PPPP
Sbjct: 301 PPPPPAGGSPPPP 313
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.6
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2
Query: 725 PPPPXXGGXPPPP 687
PPPP GG PPPP
Sbjct: 286 PPPPPAGGSPPPP 298
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.9 bits (64), Expect = 3.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 728 PPPPPXXGGXPPPP 687
PPPPP G PPPP
Sbjct: 33 PPPPPKGTGTPPPP 46
Score = 29.9 bits (64), Expect = 3.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 728 PPPPPXXGGXPPPP 687
PPPPP G PPPP
Sbjct: 64 PPPPPKGTGTPPPP 77
Score = 29.9 bits (64), Expect = 3.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 728 PPPPPXXGGXPPPP 687
PPPPP G PPPP
Sbjct: 96 PPPPPKGTGTPPPP 109
Score = 29.9 bits (64), Expect = 3.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 728 PPPPPXXGGXPPPP 687
PPPPP G PPPP
Sbjct: 127 PPPPPKGTGSPPPP 140
Score = 29.9 bits (64), Expect = 3.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 728 PPPPPXXGGXPPPP 687
PPPPP G PPPP
Sbjct: 158 PPPPPKGTGSPPPP 171
Score = 29.9 bits (64), Expect = 3.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 728 PPPPPXXGGXPPPP 687
PPPPP G PPPP
Sbjct: 189 PPPPPKGTGTPPPP 202
Score = 29.9 bits (64), Expect = 3.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 728 PPPPPXXGGXPPPP 687
PPPPP G PPPP
Sbjct: 251 PPPPPKGTGSPPPP 264
Score = 29.9 bits (64), Expect = 3.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 728 PPPPPXXGGXPPPP 687
PPPPP G PPPP
Sbjct: 282 PPPPPKGTGTPPPP 295
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 728 PPPPPXXGGXPPPP 687
PPPPP G PPPP
Sbjct: 287 PPPPPSSGMWPPPP 300
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 728 PPPPPXXGGXPPPP 687
PPPPP G PPPP
Sbjct: 297 PPPPPSSGMWPPPP 310
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 728 PPPPPXXGGXPPPP 687
PPPPP G PPPP
Sbjct: 41 PPPPPMCGCAPPPP 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,273,065
Number of Sequences: 27780
Number of extensions: 161467
Number of successful extensions: 1633
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2981737830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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