Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_J11
(925 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 27 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 27 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 27 1.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 27 2.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 27 2.0
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 27 2.6
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 27 2.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 24 4.0
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 25 5.1
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 25 5.1
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.2
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 6.2
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 26.6 bits (56), Expect(2) = 1.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 925 PPPPPPPP 902
PPPPPPPP
Sbjct: 758 PPPPPPPP 765
Score = 25.4 bits (53), Expect(2) = 1.4
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -1
Query: 922 PPPPPPPXXKXXXXGG 875
PPPPPPP GG
Sbjct: 742 PPPPPPPGGLPPISGG 757
Score = 23.8 bits (49), Expect(2) = 1.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 925 PPPPPPP 905
PPPPPPP
Sbjct: 726 PPPPPPP 732
Score = 23.8 bits (49), Expect(2) = 3.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 925 PPPPPPP 905
PPPPPPP
Sbjct: 742 PPPPPPP 748
Score = 23.8 bits (49), Expect(2) = 3.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 922 PPPPPPP 902
PPPPPPP
Sbjct: 784 PPPPPPP 790
Score = 23.0 bits (47), Expect(2) = 1.1
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 919 PPPPPPXXKXXXXGG 875
PPPPPP GG
Sbjct: 769 PPPPPPPPPGGFKGG 783
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 26.6 bits (56), Expect(2) = 1.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 925 PPPPPPPP 902
PPPPPPPP
Sbjct: 758 PPPPPPPP 765
Score = 25.4 bits (53), Expect(2) = 1.4
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -1
Query: 922 PPPPPPPXXKXXXXGG 875
PPPPPPP GG
Sbjct: 742 PPPPPPPGGLPPISGG 757
Score = 23.8 bits (49), Expect(2) = 1.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 925 PPPPPPP 905
PPPPPPP
Sbjct: 726 PPPPPPP 732
Score = 23.8 bits (49), Expect(2) = 3.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 925 PPPPPPP 905
PPPPPPP
Sbjct: 742 PPPPPPP 748
Score = 23.8 bits (49), Expect(2) = 3.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 922 PPPPPPP 902
PPPPPPP
Sbjct: 784 PPPPPPP 790
Score = 23.0 bits (47), Expect(2) = 1.1
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 919 PPPPPPXXKXXXXGG 875
PPPPPP GG
Sbjct: 769 PPPPPPPPPGGFKGG 783
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 26.6 bits (56), Expect(2) = 1.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 925 PPPPPPPP 902
PPPPPPPP
Sbjct: 341 PPPPPPPP 348
Score = 25.4 bits (53), Expect(2) = 1.4
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -1
Query: 922 PPPPPPPXXKXXXXGG 875
PPPPPPP GG
Sbjct: 325 PPPPPPPGGLPPISGG 340
Score = 23.8 bits (49), Expect(2) = 1.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 925 PPPPPPP 905
PPPPPPP
Sbjct: 309 PPPPPPP 315
Score = 23.8 bits (49), Expect(2) = 4.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 925 PPPPPPP 905
PPPPPPP
Sbjct: 325 PPPPPPP 331
Score = 23.8 bits (49), Expect(2) = 4.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 922 PPPPPPP 902
PPPPPPP
Sbjct: 367 PPPPPPP 373
Score = 23.0 bits (47), Expect(2) = 1.1
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 919 PPPPPPXXKXXXXGG 875
PPPPPP GG
Sbjct: 352 PPPPPPPPPGGFKGG 366
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 26.6 bits (56), Expect(2) = 2.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 925 PPPPPPPP 902
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
Score = 22.2 bits (45), Expect(2) = 2.0
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -1
Query: 922 PPPPPPPXXKXXXXGG 875
PPPPPP GG
Sbjct: 327 PPPPPPSRFGPPGMGG 342
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 26.6 bits (56), Expect(2) = 2.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 925 PPPPPPPP 902
PPPPPPPP
Sbjct: 297 PPPPPPPP 304
Score = 22.2 bits (45), Expect(2) = 2.0
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -1
Query: 922 PPPPPPPXXKXXXXGG 875
PPPPPP GG
Sbjct: 317 PPPPPPSRFGPPGMGG 332
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 26.6 bits (56), Expect(2) = 2.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 925 PPPPPPPP 902
PPPPPPPP
Sbjct: 155 PPPPPPPP 162
Score = 21.8 bits (44), Expect(2) = 2.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1
Query: 922 PPPPPPPXXK 893
PPPPPP K
Sbjct: 173 PPPPPPAQQK 182
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 26.6 bits (56), Expect(2) = 2.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 925 PPPPPPPP 902
PPPPPPPP
Sbjct: 155 PPPPPPPP 162
Score = 21.8 bits (44), Expect(2) = 2.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1
Query: 922 PPPPPPPXXK 893
PPPPPP K
Sbjct: 173 PPPPPPAQQK 182
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 23.8 bits (49), Expect(2) = 4.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 925 PPPPPPP 905
PPPPPPP
Sbjct: 122 PPPPPPP 128
Score = 23.8 bits (49), Expect(2) = 4.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 922 PPPPPPP 902
PPPPPPP
Sbjct: 138 PPPPPPP 144
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 24.6 bits (51), Expect(2) = 5.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 649 PXXKKKXFXXPPPXPPPP 596
P +++ PPP PPPP
Sbjct: 756 PIQQQQSSIPPPPPPPPP 773
Score = 24.2 bits (50), Expect(2) = 6.6
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -3
Query: 650 PXXXKKXFFXPPPXPPPP 597
P ++ PPP PPPP
Sbjct: 756 PIQQQQSSIPPPPPPPPP 773
Score = 22.6 bits (46), Expect(2) = 6.6
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -3
Query: 620 PPPXPPPPXXKKKKXPP 570
PPP PP P PP
Sbjct: 794 PPPPPPLPPISSGAPPP 810
Score = 22.6 bits (46), Expect(2) = 5.1
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -1
Query: 619 PPPXPPPPXXKKKXXPP 569
PPP PP P PP
Sbjct: 794 PPPPPPLPPISSGAPPP 810
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 24.6 bits (51), Expect(2) = 5.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 649 PXXKKKXFXXPPPXPPPP 596
P +++ PPP PPPP
Sbjct: 756 PIQQQQSSIPPPPPPPPP 773
Score = 24.2 bits (50), Expect(2) = 6.6
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -3
Query: 650 PXXXKKXFFXPPPXPPPP 597
P ++ PPP PPPP
Sbjct: 756 PIQQQQSSIPPPPPPPPP 773
Score = 22.6 bits (46), Expect(2) = 6.6
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -3
Query: 620 PPPXPPPPXXKKKKXPP 570
PPP PP P PP
Sbjct: 794 PPPPPPLPPISSGAPPP 810
Score = 22.6 bits (46), Expect(2) = 5.1
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -1
Query: 619 PPPXPPPPXXKKKXXPP 569
PPP PP P PP
Sbjct: 794 PPPPPPLPPISSGAPPP 810
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 28.7 bits (61), Expect = 6.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 620 PPPXPPPPXXKKKKXPP 570
PPP PPPP + ++ PP
Sbjct: 477 PPPPPPPPENEPEEFPP 493
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 925 PPPPPPPPXXKXXXXGG 875
PPPPPPPP GG
Sbjct: 305 PPPPPPPPAPAPVSSGG 321
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 925 PPPPPPPPXXKXXXXGG 875
PPPPPPPP GG
Sbjct: 305 PPPPPPPPAPAPVSSGG 321
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 620 PPPXPPPPXXKKKKXPP 570
PPP PPPP K PP
Sbjct: 86 PPPPPPPPTLKAPPPPP 102
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 619 PPPXPPPPXXKKKXXPP 569
PPP PPPP K PP
Sbjct: 86 PPPPPPPPTLKAPPPPP 102
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 620 PPPXPPPPXXKKKKXPP 570
PPP PPPP K PP
Sbjct: 84 PPPPPPPPPPTLKAPPP 100
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 619 PPPXPPPPXXKKKXXPP 569
PPP PPPP K PP
Sbjct: 84 PPPPPPPPPPTLKAPPP 100
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 620 PPPXPPPPXXKKKKXPP 570
PPP PPPP K PP
Sbjct: 85 PPPPPPPPPTLKAPPPP 101
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 619 PPPXPPPPXXKKKXXPP 569
PPP PPPP K PP
Sbjct: 85 PPPPPPPPPTLKAPPPP 101
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,124,929
Number of Sequences: 27780
Number of extensions: 149901
Number of successful extensions: 5588
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3545
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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