Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_J06
         (626 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    28   4.8  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    28   4.8  
U00058-3|AAD31933.1|  162|Caenorhabditis elegans Ground-like (gr...    28   4.8  
AF106580-3|AAC78205.1|  881|Caenorhabditis elegans Temporarily a...    28   4.8  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    28   4.8  
Z81034-4|CAB02729.1|  541|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical pr...    27   8.3  
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr...    27   8.3  

>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 575 PPPPPXXXXKKXXPPPP 525
           PPPPP    K   PPPP
Sbjct: 772 PPPPPPGGFKGGPPPPP 788



 Score = 27.9 bits (59), Expect = 6.3
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 575 PPPPPXXXXKKXXPPPP 525
           PPPPP     K  PPPP
Sbjct: 771 PPPPPPPGGFKGGPPPP 787


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 575 PPPPPXXXXKKXXPPPP 525
           PPPPP    K   PPPP
Sbjct: 772 PPPPPPGGFKGGPPPPP 788



 Score = 27.9 bits (59), Expect = 6.3
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 575 PPPPPXXXXKKXXPPPP 525
           PPPPP     K  PPPP
Sbjct: 771 PPPPPPPGGFKGGPPPP 787


>U00058-3|AAD31933.1|  162|Caenorhabditis elegans Ground-like (grd
           related) protein22 protein.
          Length = 162

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 13/40 (32%), Positives = 13/40 (32%)
 Frame = -1

Query: 626 GGGXXXXXXXXXXXXXXPPPPPXXXXKKXXPPPPXXXXXG 507
           GGG              PPPPP        PPPP     G
Sbjct: 24  GGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPPPMCG 63


>AF106580-3|AAC78205.1|  881|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 268 protein.
          Length = 881

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 575 PPPPPXXXXKKXXPPPP 525
           PPPPP     K  PPPP
Sbjct: 86  PPPPPPPPTLKAPPPPP 102


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 575 PPPPPXXXXKKXXPPPP 525
           PPPPP    K   PPPP
Sbjct: 355 PPPPPPGGFKGGPPPPP 371



 Score = 27.9 bits (59), Expect = 6.3
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 575 PPPPPXXXXKKXXPPPP 525
           PPPPP     K  PPPP
Sbjct: 354 PPPPPPPGGFKGGPPPP 370


>Z81034-4|CAB02729.1|  541|Caenorhabditis elegans Hypothetical
           protein C15C6.3 protein.
          Length = 541

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 575 PPPPPXXXXKKXXPPPP 525
           PPPPP    ++  PPPP
Sbjct: 480 PPPPPENEPEEFPPPPP 496


>Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical
           protein C33B4.3b protein.
          Length = 993

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = -1

Query: 575 PPPPPXXXXKKXXPPPPXXXXXG 507
           PPPPP        PPPP     G
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPPG 817


>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
           protein C33B4.3a protein.
          Length = 1110

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = -1

Query: 575 PPPPPXXXXKKXXPPPPXXXXXG 507
           PPPPP        PPPP     G
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPPG 817


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,374,972
Number of Sequences: 27780
Number of extensions: 199546
Number of successful extensions: 1039
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)