Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_J01
         (756 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0862 - 7172083-7172931                                           36   0.046
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    30   2.3  
06_01_0178 + 1386981-1387505                                           30   2.3  
12_02_0299 - 17051570-17052474,17053542-17053755                       29   3.0  

>07_01_0862 - 7172083-7172931
          Length = 282

 Score = 35.5 bits (78), Expect = 0.046
 Identities = 19/64 (29%), Positives = 22/64 (34%)
 Frame = +3

Query: 561 PXXXPXXPXPAXSALPXXAXLFRPPLXXXXQXXXSXXPXXXRPPXXXXXPXXPXXXXPXP 740
           P   P  P P  +A      LF PPL    +      P   R       P  P    P P
Sbjct: 125 PAPPPPPPPPPPTAEEKKLLLFPPPLPPRKKAMLFPLPLPPRKKPLLYPPPLPPKKKPLP 184

Query: 741 PPTP 752
           PP+P
Sbjct: 185 PPSP 188


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 20/80 (25%), Positives = 21/80 (26%)
 Frame = +3

Query: 507  PPXXXXPRXXXXXXXXXXPXXXPXXPXPAXSALPXXAXLFRPPLXXXXQXXXSXXPXXXR 686
            PP    P           P   P  P P  +  P       PPL           P    
Sbjct: 1137 PPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPP-----PPLSPSLPPPPPPPPLPSG 1191

Query: 687  PPXXXXXPXXPXXXXPXPPP 746
            PP     P  P    P PPP
Sbjct: 1192 PPPQPAPPPLPIQPPPIPPP 1211


>06_01_0178 + 1386981-1387505
          Length = 174

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 18/60 (30%), Positives = 20/60 (33%)
 Frame = -3

Query: 751 GVGGGXGXXXXGXXGXXXXXGGRXXXGXXEXXXXXXXXRGGRKRXAXXGSADXAGXGQXG 572
           G GGG G    G  G     GG+   G            GG+ R    G    AG G  G
Sbjct: 38  GGGGGGGGGGGGGGGGAGGKGGKGGAGGHGGAGGGGGGGGGKGRKGGAGGHGGAGGGGGG 97


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 17/60 (28%), Positives = 18/60 (30%)
 Frame = +3

Query: 573 PXXPXPAXSALPXXAXLFRPPLXXXXQXXXSXXPXXXRPPXXXXXPXXPXXXXPXPPPTP 752
           P  P PA    P    +F PP            P    PP     P       P PPP P
Sbjct: 268 PWAPPPAFP-FPHLPPIFSPPSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPP 326


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,340,561
Number of Sequences: 37544
Number of extensions: 143756
Number of successful extensions: 797
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)